RNA–Protein interactions for RNA: ENST00000233330.6

RTKN-201, Transcript of rhotekin, humanhuman

TSL 1 (best) BASIC

Gene RTKN, Length 2,220 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTKN-201ENST00000233330 SPINK6Q6UWN8 80 aa11.5□□□□□ -0.57
RTKN-201ENST00000233330 Q5XG85 94 aa11.49□□□□□ -0.57
RTKN-201ENST00000233330 NOTCH2NLQ7Z3S9 236 aa11.48□□□□□ -0.57
RTKN-201ENST00000233330 TP53AIP1Q9HCN2 124 aa11.48□□□□□ -0.57
RTKN-201ENST00000233330 KRTAP1-4P0C5Y4 121 aa11.47□□□□□ -0.57
RTKN-201ENST00000233330 MRPL34Q9BQ48 92 aaKnown RBP11.45□□□□□ -0.58
RTKN-201ENST00000233330 C1orf64Q8NEQ6 169 aa11.45□□□□□ -0.58
RTKN-201ENST00000233330 SMIM26A0A096LP01 95 aa11.44□□□□□ -0.58
RTKN-201ENST00000233330 DYNC1H1Q14204 4646 aaKnown RBP11.42□□□□□ -0.58
RTKN-201ENST00000233330 LINC00336Q6ZUF6 198 aa11.41□□□□□ -0.58
RTKN-201ENST00000233330 NDUFS5O43920 106 aa11.41□□□□□ -0.58
RTKN-201ENST00000233330 FP248Q71RG6 208 aaPredicted RBP11.41□□□□□ -0.58
RTKN-201ENST00000233330 CYP4F30PQ9H0H9 118 aa11.41□□□□□ -0.58
RTKN-201ENST00000233330 C4orf26Q17RF5 130 aa11.39□□□□□ -0.59
RTKN-201ENST00000233330 PRR4Q16378 134 aa11.38□□□□□ -0.59
RTKN-201ENST00000233330 SPANXA2-OT1Q8N9U9 137 aa11.36□□□□□ -0.59
RTKN-201ENST00000233330 PLA2G1BP04054 148 aaKnown RBP11.34□□□□□ -0.59
RTKN-201ENST00000233330 C1orf195Q5TG92 126 aa11.34□□□□□ -0.59
RTKN-201ENST00000233330 C8orf87E5RJ46 101 aa11.33□□□□□ -0.59
RTKN-201ENST00000233330 A0A1B0GVY2 172 aa11.33□□□□□ -0.6
RTKN-201ENST00000233330 RYR2Q92736 4967 aa11.32□□□□□ -0.6
RTKN-201ENST00000233330 APOBP04114 4563 aaKnown RBP11.31□□□□□ -0.6
RTKN-201ENST00000233330 LIMD2Q9BT23 127 aa11.3□□□□□ -0.6
RTKN-201ENST00000233330 TYMSOSQ8TAI1 123 aa11.28□□□□□ -0.6
RTKN-201ENST00000233330 LINC00313P59037 77 aa11.26□□□□□ -0.61
RTKN-201ENST00000233330 PCOTHQ58A44 107 aa11.25□□□□□ -0.61
RTKN-201ENST00000233330 SMR3BP02814 79 aaPredicted RBP11.24□□□□□ -0.61
RTKN-201ENST00000233330 KRTAP13-3Q3SY46 172 aa11.24□□□□□ -0.61
RTKN-201ENST00000233330 C4orf48Q5BLP8 95 aa11.24□□□□□ -0.61
RTKN-201ENST00000233330 Q5W150 140 aa11.24□□□□□ -0.61
RTKN-201ENST00000233330 FAT1Q14517 4588 aa11.23□□□□□ -0.61
RTKN-201ENST00000233330 KMT2CQ8NEZ4 4911 aaKnown RBP11.23□□□□□ -0.61
RTKN-201ENST00000233330 IGLV7-46A0A075B6I9 117 aa11.23□□□□□ -0.61
RTKN-201ENST00000233330 MPLKIPQ8TAP9 179 aa11.22□□□□□ -0.61
RTKN-201ENST00000233330 SPINK1P00995 79 aa11.21□□□□□ -0.61
RTKN-201ENST00000233330 PRR26Q8N8Z3 221 aa11.19□□□□□ -0.62
RTKN-201ENST00000233330 Q8N9P0 234 aaPredicted RBP11.19□□□□□ -0.62
RTKN-201ENST00000233330 LOC101927531A0A1B0GV80 90 aa11.17□□□□□ -0.62
RTKN-201ENST00000233330 KRTAP16-1A8MUX0 517 aa11.16□□□□□ -0.62
RTKN-201ENST00000233330 KRTAP10-4P60372 401 aaPredicted RBP11.15□□□□□ -0.62
RTKN-201ENST00000233330 LINC00304Q8N9R0 145 aa11.14□□□□□ -0.63
RTKN-201ENST00000233330 PKHD1L1Q86WI1 4243 aa11.12□□□□□ -0.63
RTKN-201ENST00000233330 RPS29P62273 56 aaKnown RBP11.12□□□□□ -0.63
RTKN-201ENST00000233330 FAM229AH3BQW9 127 aa11.11□□□□□ -0.63
RTKN-201ENST00000233330 Q1T7F1 81 aa11.11□□□□□ -0.63
RTKN-201ENST00000233330 SPAG11AQ6PDA7 123 aa11.09□□□□□ -0.63
RTKN-201ENST00000233330 COA5Q86WW8 74 aa11.08□□□□□ -0.64
RTKN-201ENST00000233330 RETNLBQ9BQ08 111 aa11.04□□□□□ -0.64
RTKN-201ENST00000233330 IGKV2-30P06310 120 aa10.99□□□□□ -0.65
RTKN-201ENST00000233330 V9GYY9 64 aa10.98□□□□□ -0.65
RTKN-201ENST00000233330 HRES1P13985 223 aa10.97□□□□□ -0.65
RTKN-201ENST00000233330 PSPHP1O15172 72 aa10.93□□□□□ -0.66
RTKN-201ENST00000233330 RYR3Q15413 4870 aa10.91□□□□□ -0.66
RTKN-201ENST00000233330 HSPG2P98160 4391 aa10.89□□□□□ -0.67
RTKN-201ENST00000233330 A8MUN3 132 aa10.88□□□□□ -0.67
RTKN-201ENST00000233330 BRK1Q8WUW1 75 aa10.86□□□□□ -0.67
RTKN-201ENST00000233330 DMAC1Q96GE9 116 aa10.86□□□□□ -0.67
RTKN-201ENST00000233330 IGKV2D-30A0A075B6S6 120 aa10.86□□□□□ -0.67
RTKN-201ENST00000233330 PRO0628Q9UI54 55 aa10.85□□□□□ -0.67
RTKN-201ENST00000233330 ACYP2P14621 99 aa10.85□□□□□ -0.67
RTKN-201ENST00000233330 Q5VV11 94 aa10.82□□□□□ -0.68
RTKN-201ENST00000233330 TNXBP22105 4242 aa10.81□□□□□ -0.68
RTKN-201ENST00000233330 C9orf92A6NGG3 77 aa10.8□□□□□ -0.68
RTKN-201ENST00000233330 PRR15LQ9BU68 103 aa10.8□□□□□ -0.68
RTKN-201ENST00000233330 LRP1Q07954 4544 aaKnown RBP10.79□□□□□ -0.68
RTKN-201ENST00000233330 RYR1P21817 5038 aa10.78□□□□□ -0.68
RTKN-201ENST00000233330 FLG2Q5D862 2391 aaPredicted RBP10.77□□□□□ -0.68
RTKN-201ENST00000233330 Q5VSD8 79 aa10.77□□□□□ -0.68
RTKN-201ENST00000233330 C20orf166-AS1Q96NR2 134 aa10.77□□□□□ -0.69
RTKN-201ENST00000233330 LINC01558Q9Y6Z2 57 aa10.77□□□□□ -0.69
RTKN-201ENST00000233330 A8MUU9 505 aa10.76□□□□□ -0.69
RTKN-201ENST00000233330 FAT3Q8TDW7 4589 aa10.75□□□□□ -0.69
RTKN-201ENST00000233330 C7orf65Q6ZTY9 151 aa10.74□□□□□ -0.69
RTKN-201ENST00000233330 Q8N1X5 172 aa10.73□□□□□ -0.69
RTKN-201ENST00000233330 CHKB-CPT1BH3BT56 60 aa10.7□□□□□ -0.7
RTKN-201ENST00000233330 KRTAP10-8P60410 259 aa10.7□□□□□ -0.7
RTKN-201ENST00000233330 Q75L30 129 aa10.7□□□□□ -0.7
RTKN-201ENST00000233330 KRTAP17-1Q9BYP8 105 aa10.63□□□□□ -0.71
RTKN-201ENST00000233330 KIAA1109Q2LD37 5005 aa10.61□□□□□ -0.71
RTKN-201ENST00000233330 A6NED7 52 aa10.56□□□□□ -0.72
RTKN-201ENST00000233330 A8MU10 97 aa10.55□□□□□ -0.72
RTKN-201ENST00000233330 SPINK7P58062 85 aa10.51□□□□□ -0.73
RTKN-201ENST00000233330 MYCBP2O75592 4640 aa10.51□□□□□ -0.73
RTKN-201ENST00000233330 EPPK1P58107 5090 aaKnown RBP10.51□□□□□ -0.73
RTKN-201ENST00000233330 LCA10Q71F78 164 aa10.49□□□□□ -0.73
RTKN-201ENST00000233330 DMBT1Q9UGM3 2413 aaPredicted RBP10.49□□□□□ -0.73
RTKN-201ENST00000233330 MT1HL1P0DM35 61 aa10.45□□□□□ -0.74
RTKN-201ENST00000233330 A0A1B0GU69 56 aa10.44□□□□□ -0.74
RTKN-201ENST00000233330 CDC42SE1Q9NRR8 79 aa10.44□□□□□ -0.74
RTKN-201ENST00000233330 KRTAP3-1Q9BYR8 98 aa10.42□□□□□ -0.74
RTKN-201ENST00000233330 ATP11AUNQ6ZP68 121 aa10.39□□□□□ -0.75
RTKN-201ENST00000233330 RPL37P61927 97 aaKnown RBP10.38□□□□□ -0.75
RTKN-201ENST00000233330 XP32Q5T750 250 aa10.37□□□□□ -0.75
RTKN-201ENST00000233330 SPTSSBQ8NFR3 76 aa10.31□□□□□ -0.76
RTKN-201ENST00000233330 COX6B2Q6YFQ2 88 aa10.31□□□□□ -0.76
RTKN-201ENST00000233330 PMAIP1Q13794 54 aa10.26□□□□□ -0.77
RTKN-201ENST00000233330 UQCR11O14957 56 aa10.21□□□□□ -0.77
RTKN-201ENST00000233330 SEC61GP60059 68 aa10.19□□□□□ -0.78
RTKN-201ENST00000233330 SPATA8Q6RVD6 105 aa10.19□□□□□ -0.78
RTKN-201ENST00000233330 KRTAP4-5Q9BYR2 181 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms