RNA–Protein interactions for RNA: ENST00000228827.7

GPN3-201, Transcript of GPN-loop GTPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPN3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-201ENST00000228827 CCKP06307 115 aa7.37□□□□□ -1.23
GPN3-201ENST00000228827 DEFB116Q30KQ4 102 aa7.37□□□□□ -1.23
GPN3-201ENST00000228827 TRACP01848 142 aa7.36□□□□□ -1.23
GPN3-201ENST00000228827 UBE2V1Q13404 147 aa7.36□□□□□ -1.23
GPN3-201ENST00000228827 LCE1DQ5T752 114 aa7.36□□□□□ -1.23
GPN3-201ENST00000228827 VPS25Q9BRG1 176 aa7.36□□□□□ -1.23
GPN3-201ENST00000228827 TAX1BP3O14907 124 aa7.35□□□□□ -1.23
GPN3-201ENST00000228827 LINC00313P59037 77 aa7.34□□□□□ -1.23
GPN3-201ENST00000228827 FLGP20930 4061 aaPredicted RBP7.34□□□□□ -1.23
GPN3-201ENST00000228827 C9orf118A6NHY6 69 aa7.33□□□□□ -1.24
GPN3-201ENST00000228827 KRTAP4-9Q9BYQ8 210 aa7.33□□□□□ -1.24
GPN3-201ENST00000228827 NOTCH2NLQ7Z3S9 236 aa7.32□□□□□ -1.24
GPN3-201ENST00000228827 LINC00472Q9H8W2 130 aa7.32□□□□□ -1.24
GPN3-201ENST00000228827 RBM3P98179 157 aaKnown RBP7.31□□□□□ -1.24
GPN3-201ENST00000228827 IGHV6-1A0A0B4J1U7 121 aa7.3□□□□□ -1.24
GPN3-201ENST00000228827 KRTAP16-1A8MUX0 517 aa7.3□□□□□ -1.24
GPN3-201ENST00000228827 BAALC-AS2P0C853 105 aa7.3□□□□□ -1.24
GPN3-201ENST00000228827 DSCR8Q96T75 97 aa7.3□□□□□ -1.24
GPN3-201ENST00000228827 LYRM7Q5U5X0 104 aa7.3□□□□□ -1.24
GPN3-201ENST00000228827 NAA38Q9BRA0 125 aaKnown RBP7.3□□□□□ -1.24
GPN3-201ENST00000228827 TRBV20-1A0A075B6N2 111 aa7.28□□□□□ -1.24
GPN3-201ENST00000228827 A0A1W2PPM0 123 aa7.28□□□□□ -1.24
GPN3-201ENST00000228827 CRCT1Q9UGL9 99 aa7.27□□□□□ -1.25
GPN3-201ENST00000228827 FSIP2Q5CZC0 6907 aa7.26□□□□□ -1.25
GPN3-201ENST00000228827 C9JAW5 83 aa7.25□□□□□ -1.25
GPN3-201ENST00000228827 A0A1B0GV90 55 aa7.24□□□□□ -1.25
GPN3-201ENST00000228827 ATXN8Q156A1 80 aa7.24□□□□□ -1.25
GPN3-201ENST00000228827 A0A1B0GVX0 72 aa7.24□□□□□ -1.25
GPN3-201ENST00000228827 SPCS1Q9Y6A9 102 aa7.24□□□□□ -1.25
GPN3-201ENST00000228827 GTF2H5Q6ZYL4 71 aa7.23□□□□□ -1.25
GPN3-201ENST00000228827 C8orf87E5RJ46 101 aa7.21□□□□□ -1.26
GPN3-201ENST00000228827 K7EP34 96 aa7.2□□□□□ -1.26
GPN3-201ENST00000228827 Q6ZQT0 140 aa7.2□□□□□ -1.26
GPN3-201ENST00000228827 FAM236DA0A1B0GTK5 79 aa7.19□□□□□ -1.26
GPN3-201ENST00000228827 FAM236CP0DP71 79 aa7.19□□□□□ -1.26
GPN3-201ENST00000228827 J3KT08 172 aa7.18□□□□□ -1.26
GPN3-201ENST00000228827 C21orf62-AS1Q17RA5 79 aa7.18□□□□□ -1.26
GPN3-201ENST00000228827 JMJD7-PLA2G4BH0Y9G9 81 aa7.17□□□□□ -1.26
GPN3-201ENST00000228827 LOC110117498A0A087WWA1 95 aa7.16□□□□□ -1.26
GPN3-201ENST00000228827 HRES1P13985 223 aa7.16□□□□□ -1.26
GPN3-201ENST00000228827 C14orf132Q9NPU4 83 aa7.16□□□□□ -1.26
GPN3-201ENST00000228827 NDUFB1O75438 58 aa7.15□□□□□ -1.27
GPN3-201ENST00000228827 RBM12B-AS1Q9P1G2 102 aa7.14□□□□□ -1.27
GPN3-201ENST00000228827 MPLKIPQ8TAP9 179 aa7.13□□□□□ -1.27
GPN3-201ENST00000228827 ZCCHC13Q8WW36 166 aaKnown RBP7.12□□□□□ -1.27
GPN3-201ENST00000228827 PDE6GP18545 87 aa7.11□□□□□ -1.27
GPN3-201ENST00000228827 A8MWP4 228 aa7.11□□□□□ -1.27
GPN3-201ENST00000228827 C8orf17Q9NRJ1 99 aa7.11□□□□□ -1.27
GPN3-201ENST00000228827 A0A1B0GW54 56 aa7.1□□□□□ -1.27
GPN3-201ENST00000228827 F8W1H4 67 aa7.1□□□□□ -1.27
GPN3-201ENST00000228827 IGKV3D-7A0A0C4DH55 119 aa7.09□□□□□ -1.27
GPN3-201ENST00000228827 H3BT86 120 aa7.07□□□□□ -1.28
GPN3-201ENST00000228827 SPINK7P58062 85 aa7.07□□□□□ -1.28
GPN3-201ENST00000228827 NREPQ16612 68 aa7.07□□□□□ -1.28
GPN3-201ENST00000228827 Q8N9P0 234 aaPredicted RBP7.07□□□□□ -1.28
GPN3-201ENST00000228827 KRTAP19-1Q8IUB9 90 aa7.06□□□□□ -1.28
GPN3-201ENST00000228827 MTURNQ8N3F0 131 aa7.06□□□□□ -1.28
GPN3-201ENST00000228827 PRO0461Q9UI25 63 aa7.05□□□□□ -1.28
GPN3-201ENST00000228827 Q6ZVQ6 151 aa7.04□□□□□ -1.28
GPN3-201ENST00000228827 PRR15Q8IV56 129 aa7.04□□□□□ -1.28
GPN3-201ENST00000228827 MT2AP02795 61 aa7.03□□□□□ -1.28
GPN3-201ENST00000228827 USH2AO75445 5202 aa7.02□□□□□ -1.29
GPN3-201ENST00000228827 MMP24-AS1A0A0U1RRL7 71 aa7□□□□□ -1.29
GPN3-201ENST00000228827 ETDBQ3ZM63 59 aa6.98□□□□□ -1.29
GPN3-201ENST00000228827 WFDC13Q8IUB5 93 aa6.98□□□□□ -1.29
GPN3-201ENST00000228827 K7EQZ3 153 aa6.98□□□□□ -1.29
GPN3-201ENST00000228827 MT1FP04733 61 aa6.98□□□□□ -1.29
GPN3-201ENST00000228827 TMEM254Q8TBM7 123 aa6.98□□□□□ -1.29
GPN3-201ENST00000228827 MRPL34Q9BQ48 92 aaKnown RBP6.98□□□□□ -1.29
GPN3-201ENST00000228827 hDV103S1A0JD37 113 aa6.95□□□□□ -1.3
GPN3-201ENST00000228827 NDUFS5O43920 106 aa6.95□□□□□ -1.3
GPN3-201ENST00000228827 KRTAP10-10P60014 251 aa6.95□□□□□ -1.3
GPN3-201ENST00000228827 BPY2O14599 106 aa6.94□□□□□ -1.3
GPN3-201ENST00000228827 SSPOA2VEC9 5147 aa6.94□□□□□ -1.3
GPN3-201ENST00000228827 J3QR89 54 aa6.91□□□□□ -1.3
GPN3-201ENST00000228827 Q8N9L7 120 aa6.9□□□□□ -1.31
GPN3-201ENST00000228827 KRTAP9-3Q9BYQ3 159 aa6.89□□□□□ -1.31
GPN3-201ENST00000228827 KRTAP4-11Q9BYQ6 195 aa6.87□□□□□ -1.31
GPN3-201ENST00000228827 IGKV2D-30A0A075B6S6 120 aa6.86□□□□□ -1.31
GPN3-201ENST00000228827 K7ERU9 68 aa6.86□□□□□ -1.31
GPN3-201ENST00000228827 IGKV2-30P06310 120 aa6.86□□□□□ -1.31
GPN3-201ENST00000228827 Q5W150 140 aa6.85□□□□□ -1.31
GPN3-201ENST00000228827 CASC2Q6XLA1 102 aa6.85□□□□□ -1.31
GPN3-201ENST00000228827 HCG22E2RYF7 251 aa6.83□□□□□ -1.32
GPN3-201ENST00000228827 ACYP1P07311 99 aa6.81□□□□□ -1.32
GPN3-201ENST00000228827 H1FX-AS1Q4G0G2 97 aa6.81□□□□□ -1.32
GPN3-201ENST00000228827 C7orf65Q6ZTY9 151 aa6.81□□□□□ -1.32
GPN3-201ENST00000228827 LINC00846Q9NV44 126 aa6.81□□□□□ -1.32
GPN3-201ENST00000228827 FAM240AA0A1B0GVK7 77 aa6.79□□□□□ -1.32
GPN3-201ENST00000228827 UBL5Q9BZL1 73 aa6.79□□□□□ -1.32
GPN3-201ENST00000228827 FCGBPQ9Y6R7 5405 aaPredicted RBP6.76□□□□□ -1.33
GPN3-201ENST00000228827 CXCL6P80162 114 aa6.75□□□□□ -1.33
GPN3-201ENST00000228827 C4orf26Q17RF5 130 aa6.73□□□□□ -1.33
GPN3-201ENST00000228827 KRTAP9-7A8MTY7 169 aa6.7□□□□□ -1.34
GPN3-201ENST00000228827 LINC00643Q86TS7 51 aa6.66□□□□□ -1.34
GPN3-201ENST00000228827 ATP5EP2Q5VTU8 51 aa6.63□□□□□ -1.35
GPN3-201ENST00000228827 C5orf47Q569G3 176 aa6.62□□□□□ -1.35
GPN3-201ENST00000228827 KRTAP19-6Q3LI70 58 aa6.61□□□□□ -1.35
GPN3-201ENST00000228827 KRTAP3-1Q9BYR8 98 aa6.61□□□□□ -1.35
GPN3-201ENST00000228827 C1orf64Q8NEQ6 169 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms