RNA–Protein interactions for RNA: ENST00000228251.8

YBX3-201, Transcript of Y-box binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene YBX3, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-201ENST00000228251 NOTCH2NLQ7Z3S9 236 aa11.12□□□□□ -0.63
YBX3-201ENST00000228251 Q5XG85 94 aa11.11□□□□□ -0.63
YBX3-201ENST00000228251 LINC00336Q6ZUF6 198 aa11.11□□□□□ -0.63
YBX3-201ENST00000228251 LINC00208Q96KT6 92 aa11.11□□□□□ -0.63
YBX3-201ENST00000228251 A0A1B0GVY2 172 aa11.1□□□□□ -0.63
YBX3-201ENST00000228251 CDK2AP2O75956 126 aa11.09□□□□□ -0.63
YBX3-201ENST00000228251 RYR2Q92736 4967 aa11.08□□□□□ -0.64
YBX3-201ENST00000228251 TP53AIP1Q9HCN2 124 aa11.08□□□□□ -0.64
YBX3-201ENST00000228251 APOBP04114 4563 aaKnown RBP11.07□□□□□ -0.64
YBX3-201ENST00000228251 MRPL34Q9BQ48 92 aaKnown RBP11.07□□□□□ -0.64
YBX3-201ENST00000228251 SPINK6Q6UWN8 80 aa11.05□□□□□ -0.64
YBX3-201ENST00000228251 CYP4F30PQ9H0H9 118 aa11.04□□□□□ -0.64
YBX3-201ENST00000228251 C1orf64Q8NEQ6 169 aa11.03□□□□□ -0.64
YBX3-201ENST00000228251 C1orf195Q5TG92 126 aa11.01□□□□□ -0.65
YBX3-201ENST00000228251 SMIM26A0A096LP01 95 aa11□□□□□ -0.65
YBX3-201ENST00000228251 KMT2CQ8NEZ4 4911 aaKnown RBP11□□□□□ -0.65
YBX3-201ENST00000228251 FP248Q71RG6 208 aaPredicted RBP11□□□□□ -0.65
YBX3-201ENST00000228251 SPANXA2-OT1Q8N9U9 137 aa10.99□□□□□ -0.65
YBX3-201ENST00000228251 C8orf87E5RJ46 101 aa10.98□□□□□ -0.65
YBX3-201ENST00000228251 PLA2G1BP04054 148 aaKnown RBP10.97□□□□□ -0.65
YBX3-201ENST00000228251 KRTAP13-3Q3SY46 172 aa10.95□□□□□ -0.66
YBX3-201ENST00000228251 FAT1Q14517 4588 aa10.94□□□□□ -0.66
YBX3-201ENST00000228251 KRTAP10-4P60372 401 aaPredicted RBP10.93□□□□□ -0.66
YBX3-201ENST00000228251 NDUFS5O43920 106 aa10.93□□□□□ -0.66
YBX3-201ENST00000228251 C4orf26Q17RF5 130 aa10.93□□□□□ -0.66
YBX3-201ENST00000228251 LIMD2Q9BT23 127 aa10.93□□□□□ -0.66
YBX3-201ENST00000228251 PKHD1L1Q86WI1 4243 aa10.91□□□□□ -0.66
YBX3-201ENST00000228251 PRR4Q16378 134 aa10.9□□□□□ -0.66
YBX3-201ENST00000228251 TYMSOSQ8TAI1 123 aa10.9□□□□□ -0.66
YBX3-201ENST00000228251 Q5W150 140 aa10.89□□□□□ -0.67
YBX3-201ENST00000228251 KRTAP16-1A8MUX0 517 aa10.87□□□□□ -0.67
YBX3-201ENST00000228251 SPINK1P00995 79 aa10.87□□□□□ -0.67
YBX3-201ENST00000228251 LINC00313P59037 77 aa10.87□□□□□ -0.67
YBX3-201ENST00000228251 Q8N9P0 234 aaPredicted RBP10.87□□□□□ -0.67
YBX3-201ENST00000228251 SMR3BP02814 79 aaPredicted RBP10.86□□□□□ -0.67
YBX3-201ENST00000228251 IGLV7-46A0A075B6I9 117 aa10.85□□□□□ -0.67
YBX3-201ENST00000228251 PRR26Q8N8Z3 221 aa10.84□□□□□ -0.67
YBX3-201ENST00000228251 RPS29P62273 56 aaKnown RBP10.83□□□□□ -0.68
YBX3-201ENST00000228251 C4orf48Q5BLP8 95 aa10.82□□□□□ -0.68
YBX3-201ENST00000228251 PCOTHQ58A44 107 aa10.8□□□□□ -0.68
YBX3-201ENST00000228251 LOC101927531A0A1B0GV80 90 aa10.8□□□□□ -0.68
YBX3-201ENST00000228251 LINC00304Q8N9R0 145 aa10.79□□□□□ -0.68
YBX3-201ENST00000228251 RYR3Q15413 4870 aa10.77□□□□□ -0.68
YBX3-201ENST00000228251 SPAG11AQ6PDA7 123 aa10.76□□□□□ -0.69
YBX3-201ENST00000228251 FAM229AH3BQW9 127 aa10.73□□□□□ -0.69
YBX3-201ENST00000228251 MPLKIPQ8TAP9 179 aa10.72□□□□□ -0.69
YBX3-201ENST00000228251 Q1T7F1 81 aa10.72□□□□□ -0.69
YBX3-201ENST00000228251 COA5Q86WW8 74 aa10.67□□□□□ -0.7
YBX3-201ENST00000228251 HSPG2P98160 4391 aa10.66□□□□□ -0.7
YBX3-201ENST00000228251 IGKV2-30P06310 120 aa10.65□□□□□ -0.71
YBX3-201ENST00000228251 HRES1P13985 223 aa10.6□□□□□ -0.71
YBX3-201ENST00000228251 RETNLBQ9BQ08 111 aa10.6□□□□□ -0.71
YBX3-201ENST00000228251 TNXBP22105 4242 aa10.57□□□□□ -0.72
YBX3-201ENST00000228251 V9GYY9 64 aa10.55□□□□□ -0.72
YBX3-201ENST00000228251 RYR1P21817 5038 aa10.54□□□□□ -0.72
YBX3-201ENST00000228251 DMAC1Q96GE9 116 aa10.52□□□□□ -0.72
YBX3-201ENST00000228251 FLG2Q5D862 2391 aaPredicted RBP10.52□□□□□ -0.73
YBX3-201ENST00000228251 LRP1Q07954 4544 aaKnown RBP10.51□□□□□ -0.73
YBX3-201ENST00000228251 FAT3Q8TDW7 4589 aa10.5□□□□□ -0.73
YBX3-201ENST00000228251 A8MUU9 505 aa10.47□□□□□ -0.73
YBX3-201ENST00000228251 C20orf166-AS1Q96NR2 134 aa10.47□□□□□ -0.73
YBX3-201ENST00000228251 PSPHP1O15172 72 aa10.47□□□□□ -0.73
YBX3-201ENST00000228251 KRTAP10-8P60410 259 aa10.47□□□□□ -0.73
YBX3-201ENST00000228251 A8MUN3 132 aa10.46□□□□□ -0.74
YBX3-201ENST00000228251 Q5VSD8 79 aa10.45□□□□□ -0.74
YBX3-201ENST00000228251 ACYP2P14621 99 aa10.44□□□□□ -0.74
YBX3-201ENST00000228251 KRTAP17-1Q9BYP8 105 aa10.44□□□□□ -0.74
YBX3-201ENST00000228251 IGKV2D-30A0A075B6S6 120 aa10.44□□□□□ -0.74
YBX3-201ENST00000228251 Q5VV11 94 aa10.44□□□□□ -0.74
YBX3-201ENST00000228251 Q8N1X5 172 aa10.43□□□□□ -0.74
YBX3-201ENST00000228251 C9orf92A6NGG3 77 aa10.41□□□□□ -0.74
YBX3-201ENST00000228251 PRO0628Q9UI54 55 aa10.4□□□□□ -0.74
YBX3-201ENST00000228251 LINC01558Q9Y6Z2 57 aa10.4□□□□□ -0.74
YBX3-201ENST00000228251 C7orf65Q6ZTY9 151 aa10.37□□□□□ -0.75
YBX3-201ENST00000228251 EPPK1P58107 5090 aaKnown RBP10.37□□□□□ -0.75
YBX3-201ENST00000228251 BRK1Q8WUW1 75 aa10.36□□□□□ -0.75
YBX3-201ENST00000228251 PRR15LQ9BU68 103 aa10.35□□□□□ -0.75
YBX3-201ENST00000228251 KIAA1109Q2LD37 5005 aa10.34□□□□□ -0.75
YBX3-201ENST00000228251 Q75L30 129 aa10.32□□□□□ -0.76
YBX3-201ENST00000228251 CHKB-CPT1BH3BT56 60 aa10.24□□□□□ -0.77
YBX3-201ENST00000228251 MT1HL1P0DM35 61 aa10.23□□□□□ -0.77
YBX3-201ENST00000228251 MYCBP2O75592 4640 aa10.21□□□□□ -0.78
YBX3-201ENST00000228251 DMBT1Q9UGM3 2413 aaPredicted RBP10.16□□□□□ -0.78
YBX3-201ENST00000228251 A8MU10 97 aa10.16□□□□□ -0.78
YBX3-201ENST00000228251 SPINK7P58062 85 aa10.16□□□□□ -0.78
YBX3-201ENST00000228251 KRTAP3-1Q9BYR8 98 aa10.14□□□□□ -0.79
YBX3-201ENST00000228251 LCA10Q71F78 164 aa10.11□□□□□ -0.79
YBX3-201ENST00000228251 A6NED7 52 aa10.09□□□□□ -0.79
YBX3-201ENST00000228251 RPL37P61927 97 aaKnown RBP10.09□□□□□ -0.79
YBX3-201ENST00000228251 XP32Q5T750 250 aa10.07□□□□□ -0.8
YBX3-201ENST00000228251 CDC42SE1Q9NRR8 79 aa10.05□□□□□ -0.8
YBX3-201ENST00000228251 A0A1B0GU69 56 aa10.01□□□□□ -0.81
YBX3-201ENST00000228251 ATP11AUNQ6ZP68 121 aa10.01□□□□□ -0.81
YBX3-201ENST00000228251 BIRC6Q9NR09 4857 aa10□□□□□ -0.81
YBX3-201ENST00000228251 COX6B2Q6YFQ2 88 aa9.99□□□□□ -0.81
YBX3-201ENST00000228251 KRTAP4-5Q9BYR2 181 aa9.95□□□□□ -0.82
YBX3-201ENST00000228251 SPTSSBQ8NFR3 76 aa9.91□□□□□ -0.82
YBX3-201ENST00000228251 HERC2O95714 4834 aa9.9□□□□□ -0.82
YBX3-201ENST00000228251 TPRXLQ17RH7 258 aa9.88□□□□□ -0.83
YBX3-201ENST00000228251 SPATA8Q6RVD6 105 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms