RNA–Protein interactions for RNA: ENST00000225504.7

SUPT4H1-201, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUPT4H1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-201ENST00000225504 K7EP34 96 aa7.77□□□□□ -1.17
SUPT4H1-201ENST00000225504 SEC61BP60468 96 aaKnown RBP7.77□□□□□ -1.17
SUPT4H1-201ENST00000225504 IGKV4-1P06312 121 aa7.76□□□□□ -1.17
SUPT4H1-201ENST00000225504 SEC61GP60059 68 aa7.76□□□□□ -1.17
SUPT4H1-201ENST00000225504 PRO0461Q9UI25 63 aa7.75□□□□□ -1.17
SUPT4H1-201ENST00000225504 PDE6GP18545 87 aa7.75□□□□□ -1.17
SUPT4H1-201ENST00000225504 PCOTHQ58A44 107 aa7.74□□□□□ -1.17
SUPT4H1-201ENST00000225504 SIGMAR1Q99720 223 aa7.74□□□□□ -1.17
SUPT4H1-201ENST00000225504 K7ERU9 68 aa7.72□□□□□ -1.17
SUPT4H1-201ENST00000225504 RPL37P61927 97 aaKnown RBP7.72□□□□□ -1.17
SUPT4H1-201ENST00000225504 DSCR10P59022 87 aa7.71□□□□□ -1.18
SUPT4H1-201ENST00000225504 NOTCH2NLQ7Z3S9 236 aa7.71□□□□□ -1.18
SUPT4H1-201ENST00000225504 A0A1B0GW54 56 aa7.68□□□□□ -1.18
SUPT4H1-201ENST00000225504 GTF2H5Q6ZYL4 71 aa7.68□□□□□ -1.18
SUPT4H1-201ENST00000225504 IGHV6-1A0A0B4J1U7 121 aa7.66□□□□□ -1.18
SUPT4H1-201ENST00000225504 LINC00313P59037 77 aa7.66□□□□□ -1.18
SUPT4H1-201ENST00000225504 Q75L30 129 aa7.65□□□□□ -1.18
SUPT4H1-201ENST00000225504 KRTAP16-1A8MUX0 517 aa7.64□□□□□ -1.19
SUPT4H1-201ENST00000225504 A0A1B0GVX0 72 aa7.63□□□□□ -1.19
SUPT4H1-201ENST00000225504 J3KT08 172 aa7.63□□□□□ -1.19
SUPT4H1-201ENST00000225504 NREPQ16612 68 aa7.63□□□□□ -1.19
SUPT4H1-201ENST00000225504 C20orf166-AS1Q96NR2 134 aa7.63□□□□□ -1.19
SUPT4H1-201ENST00000225504 A8MUU9 505 aa7.62□□□□□ -1.19
SUPT4H1-201ENST00000225504 F8W1H4 67 aa7.62□□□□□ -1.19
SUPT4H1-201ENST00000225504 FAT4Q6V0I7 4981 aa7.6□□□□□ -1.19
SUPT4H1-201ENST00000225504 IGKV3D-7A0A0C4DH55 119 aa7.59□□□□□ -1.19
SUPT4H1-201ENST00000225504 ETDBQ3ZM63 59 aa7.59□□□□□ -1.19
SUPT4H1-201ENST00000225504 ATP11AUNQ6ZP68 121 aa7.59□□□□□ -1.19
SUPT4H1-201ENST00000225504 KRTAP4-8Q9BYQ9 185 aa7.59□□□□□ -1.19
SUPT4H1-201ENST00000225504 A8MWP4 228 aa7.57□□□□□ -1.2
SUPT4H1-201ENST00000225504 SMIM20Q8N5G0 67 aa7.57□□□□□ -1.2
SUPT4H1-201ENST00000225504 C8orf87E5RJ46 101 aa7.56□□□□□ -1.2
SUPT4H1-201ENST00000225504 NDUFB1O75438 58 aa7.56□□□□□ -1.2
SUPT4H1-201ENST00000225504 A0A0U1RQV1 116 aa7.55□□□□□ -1.2
SUPT4H1-201ENST00000225504 Q6ZVQ6 151 aa7.55□□□□□ -1.2
SUPT4H1-201ENST00000225504 LINC00846Q9NV44 126 aa7.55□□□□□ -1.2
SUPT4H1-201ENST00000225504 C8orf17Q9NRJ1 99 aa7.54□□□□□ -1.2
SUPT4H1-201ENST00000225504 KRTAP19-2Q3LHN2 52 aa7.53□□□□□ -1.2
SUPT4H1-201ENST00000225504 PRR15Q8IV56 129 aa7.53□□□□□ -1.2
SUPT4H1-201ENST00000225504 BPY2O14599 106 aa7.51□□□□□ -1.21
SUPT4H1-201ENST00000225504 K7EQZ3 153 aa7.5□□□□□ -1.21
SUPT4H1-201ENST00000225504 V9GYY9 64 aa7.49□□□□□ -1.21
SUPT4H1-201ENST00000225504 MMP24-AS1A0A0U1RRL7 71 aa7.48□□□□□ -1.21
SUPT4H1-201ENST00000225504 Q8N9L7 120 aa7.48□□□□□ -1.21
SUPT4H1-201ENST00000225504 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.47□□□□□ -1.21
SUPT4H1-201ENST00000225504 Q8N9P0 234 aaPredicted RBP7.47□□□□□ -1.21
SUPT4H1-201ENST00000225504 KRTAP9-2Q9BYQ4 174 aa7.46□□□□□ -1.22
SUPT4H1-201ENST00000225504 UBL5Q9BZL1 73 aa7.46□□□□□ -1.22
SUPT4H1-201ENST00000225504 KRTAP9-6A0A140TA67 174 aa7.42□□□□□ -1.22
SUPT4H1-201ENST00000225504 ZCCHC13Q8WW36 166 aaKnown RBP7.42□□□□□ -1.22
SUPT4H1-201ENST00000225504 hDV103S1A0JD37 113 aa7.41□□□□□ -1.22
SUPT4H1-201ENST00000225504 TMEM254Q8TBM7 123 aa7.41□□□□□ -1.22
SUPT4H1-201ENST00000225504 MRPL34Q9BQ48 92 aaKnown RBP7.41□□□□□ -1.22
SUPT4H1-201ENST00000225504 WFDC13Q8IUB5 93 aa7.38□□□□□ -1.23
SUPT4H1-201ENST00000225504 MT1HP80294 61 aa7.36□□□□□ -1.23
SUPT4H1-201ENST00000225504 CASC2Q6XLA1 102 aa7.36□□□□□ -1.23
SUPT4H1-201ENST00000225504 COX6B2Q6YFQ2 88 aa7.36□□□□□ -1.23
SUPT4H1-201ENST00000225504 NDUFS5O43920 106 aa7.34□□□□□ -1.23
SUPT4H1-201ENST00000225504 ACYP1P07311 99 aa7.34□□□□□ -1.23
SUPT4H1-201ENST00000225504 RPS28P62857 69 aaKnown RBP7.34□□□□□ -1.23
SUPT4H1-201ENST00000225504 PRO0628Q9UI54 55 aa7.34□□□□□ -1.23
SUPT4H1-201ENST00000225504 HRES1P13985 223 aa7.33□□□□□ -1.24
SUPT4H1-201ENST00000225504 CXCL6P80162 114 aa7.33□□□□□ -1.24
SUPT4H1-201ENST00000225504 SPINK7P58062 85 aa7.32□□□□□ -1.24
SUPT4H1-201ENST00000225504 FAM240AA0A1B0GVK7 77 aa7.31□□□□□ -1.24
SUPT4H1-201ENST00000225504 Q5W150 140 aa7.31□□□□□ -1.24
SUPT4H1-201ENST00000225504 HCG22E2RYF7 251 aa7.3□□□□□ -1.24
SUPT4H1-201ENST00000225504 MPLKIPQ8TAP9 179 aa7.29□□□□□ -1.24
SUPT4H1-201ENST00000225504 J3QR89 54 aa7.27□□□□□ -1.25
SUPT4H1-201ENST00000225504 ANAPC13Q9BS18 74 aa7.24□□□□□ -1.25
SUPT4H1-201ENST00000225504 C4orf26Q17RF5 130 aa7.24□□□□□ -1.25
SUPT4H1-201ENST00000225504 FLGP20930 4061 aaPredicted RBP7.23□□□□□ -1.25
SUPT4H1-201ENST00000225504 RBM12B-AS1Q9P1G2 102 aa7.22□□□□□ -1.25
SUPT4H1-201ENST00000225504 M0R2T5 61 aa7.21□□□□□ -1.26
SUPT4H1-201ENST00000225504 LCE3BQ5TA77 95 aa7.21□□□□□ -1.26
SUPT4H1-201ENST00000225504 FAM236DA0A1B0GTK5 79 aa7.2□□□□□ -1.26
SUPT4H1-201ENST00000225504 FAM236CP0DP71 79 aa7.2□□□□□ -1.26
SUPT4H1-201ENST00000225504 LINC00643Q86TS7 51 aa7.2□□□□□ -1.26
SUPT4H1-201ENST00000225504 ATP5EP2Q5VTU8 51 aa7.19□□□□□ -1.26
SUPT4H1-201ENST00000225504 IGKV2D-30A0A075B6S6 120 aa7.18□□□□□ -1.26
SUPT4H1-201ENST00000225504 IGKV2-30P06310 120 aa7.18□□□□□ -1.26
SUPT4H1-201ENST00000225504 KRTAP10-6P60371 365 aaPredicted RBP7.18□□□□□ -1.26
SUPT4H1-201ENST00000225504 HIST1H4AP62805 103 aaKnown RBP7.18□□□□□ -1.26
SUPT4H1-201ENST00000225504 KRTAP4-12Q9BQ66 201 aa7.15□□□□□ -1.27
SUPT4H1-201ENST00000225504 A0A087WVE0 104 aa7.14□□□□□ -1.27
SUPT4H1-201ENST00000225504 C7orf65Q6ZTY9 151 aa7.13□□□□□ -1.27
SUPT4H1-201ENST00000225504 TP53AIP1Q9HCN2 124 aa7.12□□□□□ -1.27
SUPT4H1-201ENST00000225504 KRTAP9-9Q9BYP9 154 aa7.09□□□□□ -1.27
SUPT4H1-201ENST00000225504 KRTAP9-4Q9BYQ2 154 aa7.09□□□□□ -1.27
SUPT4H1-201ENST00000225504 CCDC179H3BU77 68 aa7.08□□□□□ -1.28
SUPT4H1-201ENST00000225504 KRTAP4-8A0A0G2JLE6 195 aa7.03□□□□□ -1.28
SUPT4H1-201ENST00000225504 KRTAP9-8Q9BYQ0 159 aa7.03□□□□□ -1.28
SUPT4H1-201ENST00000225504 H3BS24 57 aa7.02□□□□□ -1.29
SUPT4H1-201ENST00000225504 TRAV22A0A0B4J277 110 aa7.01□□□□□ -1.29
SUPT4H1-201ENST00000225504 H1FX-AS1Q4G0G2 97 aa7.01□□□□□ -1.29
SUPT4H1-201ENST00000225504 UQCRQO14949 82 aa7□□□□□ -1.29
SUPT4H1-201ENST00000225504 CYP4F30PQ9H0H9 118 aa7□□□□□ -1.29
SUPT4H1-201ENST00000225504 KRTAP3-1Q9BYR8 98 aa6.99□□□□□ -1.29
SUPT4H1-201ENST00000225504 H0Y9P7 68 aa6.97□□□□□ -1.29
SUPT4H1-201ENST00000225504 MT-ATP8P03928 68 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms