RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 Q6ZSA8 131 aa14.92□□□□□ -0.02
RUNDC3A-201ENST00000225441 C8orf17Q9NRJ1 99 aa14.9□□□□□ -0.02
RUNDC3A-201ENST00000225441 A0A1B0GVX0 72 aa14.87□□□□□ -0.03
RUNDC3A-201ENST00000225441 CDK2AP2O75956 126 aa14.87□□□□□ -0.03
RUNDC3A-201ENST00000225441 CIRBP-AS1Q8TBR5 109 aa14.86□□□□□ -0.03
RUNDC3A-201ENST00000225441 PRR4Q16378 134 aa14.85□□□□□ -0.03
RUNDC3A-201ENST00000225441 DNAH8Q96JB1 4490 aa14.83□□□□□ -0.03
RUNDC3A-201ENST00000225441 IGLV7-46A0A075B6I9 117 aa14.82□□□□□ -0.04
RUNDC3A-201ENST00000225441 BRK1Q8WUW1 75 aa14.81□□□□□ -0.04
RUNDC3A-201ENST00000225441 CD164Q04900 197 aa14.79□□□□□ -0.04
RUNDC3A-201ENST00000225441 C1orf195Q5TG92 126 aa14.79□□□□□ -0.04
RUNDC3A-201ENST00000225441 SRRM2Q9UQ35 2752 aaKnown RBP14.78□□□□□ -0.04
RUNDC3A-201ENST00000225441 MRPL34Q9BQ48 92 aaKnown RBP14.77□□□□□ -0.05
RUNDC3A-201ENST00000225441 IGLV7-43P04211 117 aa14.76□□□□□ -0.05
RUNDC3A-201ENST00000225441 IGHV6-1A0A0B4J1U7 121 aa14.74□□□□□ -0.05
RUNDC3A-201ENST00000225441 PKHD1P08F94 4074 aa14.71□□□□□ -0.05
RUNDC3A-201ENST00000225441 DYNC1H1Q14204 4646 aaKnown RBP14.71□□□□□ -0.05
RUNDC3A-201ENST00000225441 SSBP3-AS1Q7Z2R9 100 aa14.71□□□□□ -0.06
RUNDC3A-201ENST00000225441 LIMD2Q9BT23 127 aa14.71□□□□□ -0.06
RUNDC3A-201ENST00000225441 LRP1BQ9NZR2 4599 aa14.69□□□□□ -0.06
RUNDC3A-201ENST00000225441 ANAPC11Q9NYG5 84 aa14.65□□□□□ -0.06
RUNDC3A-201ENST00000225441 NDUFS5O43920 106 aa14.64□□□□□ -0.07
RUNDC3A-201ENST00000225441 Q8N9P0 234 aaPredicted RBP14.63□□□□□ -0.07
RUNDC3A-201ENST00000225441 C8orf87E5RJ46 101 aa14.62□□□□□ -0.07
RUNDC3A-201ENST00000225441 COA5Q86WW8 74 aa14.62□□□□□ -0.07
RUNDC3A-201ENST00000225441 PSPHP1O15172 72 aa14.6□□□□□ -0.07
RUNDC3A-201ENST00000225441 LOC101927531A0A1B0GV80 90 aa14.59□□□□□ -0.07
RUNDC3A-201ENST00000225441 PCOTHQ58A44 107 aa14.57□□□□□ -0.08
RUNDC3A-201ENST00000225441 A8MUN3 132 aa14.55□□□□□ -0.08
RUNDC3A-201ENST00000225441 A0A087X002 238 aa14.52□□□□□ -0.08
RUNDC3A-201ENST00000225441 Q5VV11 94 aa14.52□□□□□ -0.08
RUNDC3A-201ENST00000225441 NOTCH2NLQ7Z3S9 236 aa14.52□□□□□ -0.08
RUNDC3A-201ENST00000225441 APOBP04114 4563 aaKnown RBP14.5□□□□□ -0.09
RUNDC3A-201ENST00000225441 KRTAP13-3Q3SY46 172 aa14.48□□□□□ -0.09
RUNDC3A-201ENST00000225441 SMR3BP02814 79 aaPredicted RBP14.47□□□□□ -0.09
RUNDC3A-201ENST00000225441 SPINK6Q6UWN8 80 aa14.47□□□□□ -0.09
RUNDC3A-201ENST00000225441 EPPK1P58107 5090 aaKnown RBP14.44□□□□□ -0.1
RUNDC3A-201ENST00000225441 Q75L30 129 aa14.43□□□□□ -0.1
RUNDC3A-201ENST00000225441 PRR15LQ9BU68 103 aa14.42□□□□□ -0.1
RUNDC3A-201ENST00000225441 LINC01558Q9Y6Z2 57 aa14.41□□□□□ -0.1
RUNDC3A-201ENST00000225441 HRES1P13985 223 aa14.38□□□□□ -0.11
RUNDC3A-201ENST00000225441 CHKB-CPT1BH3BT56 60 aa14.37□□□□□ -0.11
RUNDC3A-201ENST00000225441 LINC00313P59037 77 aa14.37□□□□□ -0.11
RUNDC3A-201ENST00000225441 Q5W150 140 aa14.37□□□□□ -0.11
RUNDC3A-201ENST00000225441 FAM229AH3BQW9 127 aa14.35□□□□□ -0.11
RUNDC3A-201ENST00000225441 KRTAP10-4P60372 401 aaPredicted RBP14.31□□□□□ -0.12
RUNDC3A-201ENST00000225441 VPS13BQ7Z7G8 4022 aa14.31□□□□□ -0.12
RUNDC3A-201ENST00000225441 KRTAP13-2Q52LG2 175 aa14.31□□□□□ -0.12
RUNDC3A-201ENST00000225441 ACYP2P14621 99 aa14.27□□□□□ -0.12
RUNDC3A-201ENST00000225441 BIRC6Q9NR09 4857 aa14.27□□□□□ -0.13
RUNDC3A-201ENST00000225441 FAT1Q14517 4588 aa14.24□□□□□ -0.13
RUNDC3A-201ENST00000225441 RYR1P21817 5038 aa14.24□□□□□ -0.13
RUNDC3A-201ENST00000225441 PLA2G1BP04054 148 aaKnown RBP14.22□□□□□ -0.13
RUNDC3A-201ENST00000225441 SPAG11AQ6PDA7 123 aa14.22□□□□□ -0.13
RUNDC3A-201ENST00000225441 DMAC1Q96GE9 116 aa14.2□□□□□ -0.14
RUNDC3A-201ENST00000225441 A6NED7 52 aa14.19□□□□□ -0.14
RUNDC3A-201ENST00000225441 KRTAP1-4P0C5Y4 121 aa14.19□□□□□ -0.14
RUNDC3A-201ENST00000225441 IGKV2-30P06310 120 aa14.18□□□□□ -0.14
RUNDC3A-201ENST00000225441 Q5VSD8 79 aa14.18□□□□□ -0.14
RUNDC3A-201ENST00000225441 HSPG2P98160 4391 aa14.17□□□□□ -0.14
RUNDC3A-201ENST00000225441 KRTAP16-1A8MUX0 517 aa14.16□□□□□ -0.14
RUNDC3A-201ENST00000225441 ATP11AUNQ6ZP68 121 aa14.15□□□□□ -0.14
RUNDC3A-201ENST00000225441 CDC42SE1Q9NRR8 79 aa14.15□□□□□ -0.14
RUNDC3A-201ENST00000225441 KIAA1109Q2LD37 5005 aa14.14□□□□□ -0.15
RUNDC3A-201ENST00000225441 PMAIP1Q13794 54 aa14.13□□□□□ -0.15
RUNDC3A-201ENST00000225441 C4orf48Q5BLP8 95 aa14.12□□□□□ -0.15
RUNDC3A-201ENST00000225441 SPINK1P00995 79 aa14.11□□□□□ -0.15
RUNDC3A-201ENST00000225441 LCA10Q71F78 164 aa14.11□□□□□ -0.15
RUNDC3A-201ENST00000225441 KRTAP17-1Q9BYP8 105 aa14.09□□□□□ -0.15
RUNDC3A-201ENST00000225441 PRR26Q8N8Z3 221 aa14.08□□□□□ -0.15
RUNDC3A-201ENST00000225441 Q8N1X5 172 aa14.07□□□□□ -0.16
RUNDC3A-201ENST00000225441 RPS29P62273 56 aaKnown RBP14.05□□□□□ -0.16
RUNDC3A-201ENST00000225441 TYMSOSQ8TAI1 123 aa14.04□□□□□ -0.16
RUNDC3A-201ENST00000225441 A8MU10 97 aa14.02□□□□□ -0.16
RUNDC3A-201ENST00000225441 PKHD1L1Q86WI1 4243 aa13.96□□□□□ -0.17
RUNDC3A-201ENST00000225441 RETNLBQ9BQ08 111 aa13.93□□□□□ -0.18
RUNDC3A-201ENST00000225441 SPTSSBQ8NFR3 76 aa13.92□□□□□ -0.18
RUNDC3A-201ENST00000225441 SPINK7P58062 85 aa13.92□□□□□ -0.18
RUNDC3A-201ENST00000225441 LINC00304Q8N9R0 145 aa13.87□□□□□ -0.19
RUNDC3A-201ENST00000225441 A6NN06 94 aa13.85□□□□□ -0.19
RUNDC3A-201ENST00000225441 IGKV2D-30A0A075B6S6 120 aa13.85□□□□□ -0.19
RUNDC3A-201ENST00000225441 KTN1-AS1Q86SY8 53 aa13.83□□□□□ -0.2
RUNDC3A-201ENST00000225441 HERC2O95714 4834 aa13.82□□□□□ -0.2
RUNDC3A-201ENST00000225441 A0A1B0GU69 56 aa13.8□□□□□ -0.2
RUNDC3A-201ENST00000225441 C7orf65Q6ZTY9 151 aa13.78□□□□□ -0.2
RUNDC3A-201ENST00000225441 KRTAP4-5Q9BYR2 181 aa13.77□□□□□ -0.21
RUNDC3A-201ENST00000225441 KRTAP10-8P60410 259 aa13.74□□□□□ -0.21
RUNDC3A-201ENST00000225441 LRP1Q07954 4544 aaKnown RBP13.7□□□□□ -0.22
RUNDC3A-201ENST00000225441 FAT3Q8TDW7 4589 aa13.67□□□□□ -0.22
RUNDC3A-201ENST00000225441 SEC61GP60059 68 aa13.67□□□□□ -0.22
RUNDC3A-201ENST00000225441 SPATA8Q6RVD6 105 aa13.67□□□□□ -0.22
RUNDC3A-201ENST00000225441 FLG2Q5D862 2391 aaPredicted RBP13.66□□□□□ -0.22
RUNDC3A-201ENST00000225441 C20orf166-AS1Q96NR2 134 aa13.62□□□□□ -0.23
RUNDC3A-201ENST00000225441 A8MUU9 505 aa13.62□□□□□ -0.23
RUNDC3A-201ENST00000225441 UQCR11O14957 56 aa13.62□□□□□ -0.23
RUNDC3A-201ENST00000225441 MT1HL1P0DM35 61 aa13.6□□□□□ -0.23
RUNDC3A-201ENST00000225441 PCLOQ9Y6V0 5065 aa13.58□□□□□ -0.24
RUNDC3A-201ENST00000225441 MYCBP2O75592 4640 aa13.58□□□□□ -0.24
RUNDC3A-201ENST00000225441 TNXBP22105 4242 aa13.56□□□□□ -0.24
RUNDC3A-201ENST00000225441 MIR22HGQ0VDD5 57 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms