RNA–Protein interactions for RNA: ENST00000219479.6

NME4-201, Transcript of NME/NM23 nucleoside diphosphate kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NME4, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME4-201ENST00000219479 LYRM7Q5U5X0 104 aa11.16□□□□□ -0.62
NME4-201ENST00000219479 A0A1B0GVX0 72 aa11.15□□□□□ -0.62
NME4-201ENST00000219479 C8orf87E5RJ46 101 aa11.15□□□□□ -0.62
NME4-201ENST00000219479 TSTD3H0UI37 97 aa11.15□□□□□ -0.62
NME4-201ENST00000219479 J3KT08 172 aa11.15□□□□□ -0.62
NME4-201ENST00000219479 BATFQ16520 125 aa11.12□□□□□ -0.63
NME4-201ENST00000219479 Q6ZQT0 140 aa11.12□□□□□ -0.63
NME4-201ENST00000219479 NDUFB1O75438 58 aa11.09□□□□□ -0.63
NME4-201ENST00000219479 PDE6GP18545 87 aa11.09□□□□□ -0.63
NME4-201ENST00000219479 LOC110117498A0A087WWA1 95 aa11.08□□□□□ -0.64
NME4-201ENST00000219479 FAM236DA0A1B0GTK5 79 aa11.07□□□□□ -0.64
NME4-201ENST00000219479 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.07□□□□□ -0.64
NME4-201ENST00000219479 FAM236CP0DP71 79 aa11.07□□□□□ -0.64
NME4-201ENST00000219479 A0A1B0GW54 56 aa11.06□□□□□ -0.64
NME4-201ENST00000219479 KRTAP9-7A8MTY7 169 aa11.06□□□□□ -0.64
NME4-201ENST00000219479 SSPOA2VEC9 5147 aa11.05□□□□□ -0.64
NME4-201ENST00000219479 C14orf132Q9NPU4 83 aa11.05□□□□□ -0.64
NME4-201ENST00000219479 USH2AO75445 5202 aa11.03□□□□□ -0.64
NME4-201ENST00000219479 RBM12B-AS1Q9P1G2 102 aa11.03□□□□□ -0.64
NME4-201ENST00000219479 A8MWP4 228 aa10.98□□□□□ -0.65
NME4-201ENST00000219479 ZCCHC13Q8WW36 166 aaKnown RBP10.97□□□□□ -0.65
NME4-201ENST00000219479 HRES1P13985 223 aa10.95□□□□□ -0.66
NME4-201ENST00000219479 NREPQ16612 68 aa10.95□□□□□ -0.66
NME4-201ENST00000219479 C9orf118A6NHY6 69 aa10.94□□□□□ -0.66
NME4-201ENST00000219479 KRTAP9-8Q9BYQ0 159 aa10.94□□□□□ -0.66
NME4-201ENST00000219479 C8orf17Q9NRJ1 99 aa10.94□□□□□ -0.66
NME4-201ENST00000219479 IGKV3D-7A0A0C4DH55 119 aa10.92□□□□□ -0.66
NME4-201ENST00000219479 LOC105371267A0A1B0GV96 52 aa10.91□□□□□ -0.66
NME4-201ENST00000219479 H3BT86 120 aa10.91□□□□□ -0.66
NME4-201ENST00000219479 A0A1W2PPM0 123 aa10.9□□□□□ -0.66
NME4-201ENST00000219479 Q8N9P0 234 aaPredicted RBP10.9□□□□□ -0.66
NME4-201ENST00000219479 MPLKIPQ8TAP9 179 aa10.9□□□□□ -0.66
NME4-201ENST00000219479 MTURNQ8N3F0 131 aa10.89□□□□□ -0.67
NME4-201ENST00000219479 TAX1BP3O14907 124 aa10.88□□□□□ -0.67
NME4-201ENST00000219479 SPINK7P58062 85 aa10.87□□□□□ -0.67
NME4-201ENST00000219479 Q6ZVQ6 151 aa10.87□□□□□ -0.67
NME4-201ENST00000219479 PRR15Q8IV56 129 aa10.87□□□□□ -0.67
NME4-201ENST00000219479 FCGBPQ9Y6R7 5405 aaPredicted RBP10.82□□□□□ -0.68
NME4-201ENST00000219479 MMP24-AS1A0A0U1RRL7 71 aa10.77□□□□□ -0.69
NME4-201ENST00000219479 TMEM254Q8TBM7 123 aa10.77□□□□□ -0.69
NME4-201ENST00000219479 SPCS1Q9Y6A9 102 aa10.77□□□□□ -0.69
NME4-201ENST00000219479 MRPL34Q9BQ48 92 aaKnown RBP10.76□□□□□ -0.69
NME4-201ENST00000219479 K7EQZ3 153 aa10.75□□□□□ -0.69
NME4-201ENST00000219479 BPY2O14599 106 aa10.75□□□□□ -0.69
NME4-201ENST00000219479 NDUFS5O43920 106 aa10.75□□□□□ -0.69
NME4-201ENST00000219479 hDV103S1A0JD37 113 aa10.74□□□□□ -0.69
NME4-201ENST00000219479 MT2AP02795 61 aa10.74□□□□□ -0.69
NME4-201ENST00000219479 WFDC13Q8IUB5 93 aa10.74□□□□□ -0.69
NME4-201ENST00000219479 KRTAP19-1Q8IUB9 90 aa10.69□□□□□ -0.7
NME4-201ENST00000219479 LCE2BO14633 110 aa10.68□□□□□ -0.7
NME4-201ENST00000219479 COL5A1-AS1Q5SY13 56 aa10.67□□□□□ -0.7
NME4-201ENST00000219479 MT1FP04733 61 aa10.66□□□□□ -0.7
NME4-201ENST00000219479 KRTAP10-10P60014 251 aa10.63□□□□□ -0.71
NME4-201ENST00000219479 SMCPP49901 116 aaPredicted RBP10.61□□□□□ -0.71
NME4-201ENST00000219479 Q8N9L7 120 aa10.61□□□□□ -0.71
NME4-201ENST00000219479 KRTAP9-3Q9BYQ3 159 aa10.61□□□□□ -0.71
NME4-201ENST00000219479 CASC2Q6XLA1 102 aa10.59□□□□□ -0.71
NME4-201ENST00000219479 IGKV2D-30A0A075B6S6 120 aa10.57□□□□□ -0.72
NME4-201ENST00000219479 K7EP34 96 aa10.57□□□□□ -0.72
NME4-201ENST00000219479 IGKV2-30P06310 120 aa10.57□□□□□ -0.72
NME4-201ENST00000219479 UBL5Q9BZL1 73 aa10.57□□□□□ -0.72
NME4-201ENST00000219479 MACF1Q9UPN3 7388 aaKnown RBP10.54□□□□□ -0.72
NME4-201ENST00000219479 HCG22E2RYF7 251 aa10.53□□□□□ -0.72
NME4-201ENST00000219479 PRO0461Q9UI25 63 aa10.53□□□□□ -0.72
NME4-201ENST00000219479 C7orf65Q6ZTY9 151 aa10.52□□□□□ -0.73
NME4-201ENST00000219479 LINC00846Q9NV44 126 aa10.52□□□□□ -0.73
NME4-201ENST00000219479 Q5W150 140 aa10.5□□□□□ -0.73
NME4-201ENST00000219479 H1FX-AS1Q4G0G2 97 aa10.49□□□□□ -0.73
NME4-201ENST00000219479 GTF2H5Q6ZYL4 71 aa10.48□□□□□ -0.73
NME4-201ENST00000219479 SYNE2Q8WXH0 6885 aaKnown RBP10.47□□□□□ -0.73
NME4-201ENST00000219479 CXCL6P80162 114 aa10.47□□□□□ -0.73
NME4-201ENST00000219479 PCP4L1A6NKN8 68 aa10.41□□□□□ -0.74
NME4-201ENST00000219479 F8W1H4 67 aa10.38□□□□□ -0.75
NME4-201ENST00000219479 KRTAP19-6Q3LI70 58 aa10.37□□□□□ -0.75
NME4-201ENST00000219479 C4orf26Q17RF5 130 aa10.35□□□□□ -0.75
NME4-201ENST00000219479 ETDBQ3ZM63 59 aa10.33□□□□□ -0.76
NME4-201ENST00000219479 TP53AIP1Q9HCN2 124 aa10.27□□□□□ -0.77
NME4-201ENST00000219479 C1orf64Q8NEQ6 169 aa10.17□□□□□ -0.78
NME4-201ENST00000219479 KRTAP6-3Q3LI67 103 aa10.16□□□□□ -0.78
NME4-201ENST00000219479 C5orf47Q569G3 176 aa10.16□□□□□ -0.78
NME4-201ENST00000219479 S4R3F8 94 aa10.15□□□□□ -0.78
NME4-201ENST00000219479 ACYP1P07311 99 aa10.14□□□□□ -0.79
NME4-201ENST00000219479 KRTAP3-1Q9BYR8 98 aa10.11□□□□□ -0.79
NME4-201ENST00000219479 FAM236AA0A1B0GUQ0 79 aa10.09□□□□□ -0.79
NME4-201ENST00000219479 FAM236BA0A1B0GV22 79 aa10.09□□□□□ -0.79
NME4-201ENST00000219479 ATP5EP2Q5VTU8 51 aa10.07□□□□□ -0.8
NME4-201ENST00000219479 CSAG1Q6PB30 78 aa10.07□□□□□ -0.8
NME4-201ENST00000219479 TRAV22A0A0B4J277 110 aa10.05□□□□□ -0.8
NME4-201ENST00000219479 FAM240AA0A1B0GVK7 77 aa10.05□□□□□ -0.8
NME4-201ENST00000219479 HIST1H4AP62805 103 aaKnown RBP10.04□□□□□ -0.8
NME4-201ENST00000219479 LCA10Q71F78 164 aa10.04□□□□□ -0.8
NME4-201ENST00000219479 CYP4F30PQ9H0H9 118 aa10.03□□□□□ -0.8
NME4-201ENST00000219479 LOC101927531A0A1B0GV80 90 aa10□□□□□ -0.81
NME4-201ENST00000219479 UQCRQO14949 82 aa9.93□□□□□ -0.82
NME4-201ENST00000219479 ATOX1O00244 68 aa9.91□□□□□ -0.82
NME4-201ENST00000219479 H0Y9P7 68 aa9.9□□□□□ -0.82
NME4-201ENST00000219479 NEBP20929 6669 aa9.9□□□□□ -0.82
NME4-201ENST00000219479 LINC00643Q86TS7 51 aa9.88□□□□□ -0.83
NME4-201ENST00000219479 A0A087WVE0 104 aa9.85□□□□□ -0.83
NME4-201ENST00000219479 KRTAP3-3Q9BYR6 98 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms