RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 J3QR89 54 aa14.94□□□□□ -0.02
CHMP4B-201ENST00000217402 A0A1B0GVX0 72 aa14.93□□□□□ -0.02
CHMP4B-201ENST00000217402 DSCR10P59022 87 aa14.93□□□□□ -0.02
CHMP4B-201ENST00000217402 NDUFB1O75438 58 aa14.92□□□□□ -0.02
CHMP4B-201ENST00000217402 IGKV3D-7A0A0C4DH55 119 aa14.91□□□□□ -0.02
CHMP4B-201ENST00000217402 XP32Q5T750 250 aa14.89□□□□□ -0.03
CHMP4B-201ENST00000217402 K7EQZ3 153 aa14.87□□□□□ -0.03
CHMP4B-201ENST00000217402 NOTCH2NLQ7Z3S9 236 aa14.87□□□□□ -0.03
CHMP4B-201ENST00000217402 LINC00313P59037 77 aa14.86□□□□□ -0.03
CHMP4B-201ENST00000217402 PRR15Q8IV56 129 aa14.84□□□□□ -0.03
CHMP4B-201ENST00000217402 Q8N9L7 120 aa14.84□□□□□ -0.03
CHMP4B-201ENST00000217402 C8orf87E5RJ46 101 aa14.81□□□□□ -0.04
CHMP4B-201ENST00000217402 K7ERU9 68 aa14.77□□□□□ -0.04
CHMP4B-201ENST00000217402 CXCL6P80162 114 aa14.77□□□□□ -0.04
CHMP4B-201ENST00000217402 C8orf17Q9NRJ1 99 aa14.77□□□□□ -0.04
CHMP4B-201ENST00000217402 KRTAP16-1A8MUX0 517 aa14.74□□□□□ -0.05
CHMP4B-201ENST00000217402 LINC00643Q86TS7 51 aa14.72□□□□□ -0.05
CHMP4B-201ENST00000217402 MMP24-AS1A0A0U1RRL7 71 aa14.7□□□□□ -0.06
CHMP4B-201ENST00000217402 ATP5EP2Q5VTU8 51 aa14.7□□□□□ -0.06
CHMP4B-201ENST00000217402 UBR4Q5T4S7 5183 aa14.68□□□□□ -0.06
CHMP4B-201ENST00000217402 RPL37P61927 97 aaKnown RBP14.67□□□□□ -0.06
CHMP4B-201ENST00000217402 C20orf166-AS1Q96NR2 134 aa14.66□□□□□ -0.06
CHMP4B-201ENST00000217402 Q75L30 129 aa14.64□□□□□ -0.07
CHMP4B-201ENST00000217402 A8MUU9 505 aa14.63□□□□□ -0.07
CHMP4B-201ENST00000217402 WFDC13Q8IUB5 93 aa14.63□□□□□ -0.07
CHMP4B-201ENST00000217402 hDV103S1A0JD37 113 aa14.62□□□□□ -0.07
CHMP4B-201ENST00000217402 SEC61BP60468 96 aaKnown RBP14.6□□□□□ -0.07
CHMP4B-201ENST00000217402 TMEM254Q8TBM7 123 aa14.59□□□□□ -0.07
CHMP4B-201ENST00000217402 HIST1H4AP62805 103 aaKnown RBP14.58□□□□□ -0.08
CHMP4B-201ENST00000217402 CASC2Q6XLA1 102 aa14.58□□□□□ -0.08
CHMP4B-201ENST00000217402 HCG22E2RYF7 251 aa14.57□□□□□ -0.08
CHMP4B-201ENST00000217402 PCOTHQ58A44 107 aa14.57□□□□□ -0.08
CHMP4B-201ENST00000217402 MRPL34Q9BQ48 92 aaKnown RBP14.56□□□□□ -0.08
CHMP4B-201ENST00000217402 Q8N9P0 234 aaPredicted RBP14.52□□□□□ -0.08
CHMP4B-201ENST00000217402 MUC17Q685J3 4493 aa14.52□□□□□ -0.09
CHMP4B-201ENST00000217402 ATP11AUNQ6ZP68 121 aa14.52□□□□□ -0.09
CHMP4B-201ENST00000217402 NDUFS5O43920 106 aa14.48□□□□□ -0.09
CHMP4B-201ENST00000217402 A0A087WVE0 104 aa14.47□□□□□ -0.09
CHMP4B-201ENST00000217402 MT-ATP8P03928 68 aa14.42□□□□□ -0.1
CHMP4B-201ENST00000217402 RNF213Q63HN8 5207 aa14.38□□□□□ -0.11
CHMP4B-201ENST00000217402 ZCCHC13Q8WW36 166 aaKnown RBP14.37□□□□□ -0.11
CHMP4B-201ENST00000217402 KRTAP4-1Q9BYQ7 146 aa14.36□□□□□ -0.11
CHMP4B-201ENST00000217402 MUC2Q02817 5179 aa14.29□□□□□ -0.12
CHMP4B-201ENST00000217402 IMUPQ9GZP8 106 aa14.27□□□□□ -0.12
CHMP4B-201ENST00000217402 Q5W150 140 aa14.23□□□□□ -0.13
CHMP4B-201ENST00000217402 TP53AIP1Q9HCN2 124 aa14.21□□□□□ -0.13
CHMP4B-201ENST00000217402 SCGB1A1P11684 91 aa14.11□□□□□ -0.15
CHMP4B-201ENST00000217402 FAM236AA0A1B0GUQ0 79 aa14.09□□□□□ -0.15
CHMP4B-201ENST00000217402 FAM236BA0A1B0GV22 79 aa14.09□□□□□ -0.15
CHMP4B-201ENST00000217402 SPINK7P58062 85 aa14.09□□□□□ -0.15
CHMP4B-201ENST00000217402 UQCRQO14949 82 aa14.05□□□□□ -0.16
CHMP4B-201ENST00000217402 IGKV2D-30A0A075B6S6 120 aa14.04□□□□□ -0.16
CHMP4B-201ENST00000217402 IGKV2-30P06310 120 aa14.04□□□□□ -0.16
CHMP4B-201ENST00000217402 OCR1Q9BZK8 76 aa14.04□□□□□ -0.16
CHMP4B-201ENST00000217402 TRAV22A0A0B4J277 110 aa14.03□□□□□ -0.16
CHMP4B-201ENST00000217402 C7orf65Q6ZTY9 151 aa13.98□□□□□ -0.17
CHMP4B-201ENST00000217402 H0Y9P7 68 aa13.96□□□□□ -0.17
CHMP4B-201ENST00000217402 HRES1P13985 223 aa13.96□□□□□ -0.17
CHMP4B-201ENST00000217402 A0A0U1RQV1 116 aa13.9□□□□□ -0.18
CHMP4B-201ENST00000217402 ATOX1O00244 68 aa13.88□□□□□ -0.19
CHMP4B-201ENST00000217402 KRTAP19-2Q3LHN2 52 aa13.87□□□□□ -0.19
CHMP4B-201ENST00000217402 COX6B2Q6YFQ2 88 aa13.85□□□□□ -0.19
CHMP4B-201ENST00000217402 SMIM20Q8N5G0 67 aa13.85□□□□□ -0.19
CHMP4B-201ENST00000217402 LOC101927531A0A1B0GV80 90 aa13.84□□□□□ -0.19
CHMP4B-201ENST00000217402 MP68P56378 58 aa13.84□□□□□ -0.19
CHMP4B-201ENST00000217402 C5orf47Q569G3 176 aa13.83□□□□□ -0.2
CHMP4B-201ENST00000217402 MPLKIPQ8TAP9 179 aa13.83□□□□□ -0.2
CHMP4B-201ENST00000217402 RBM12B-AS1Q9P1G2 102 aa13.82□□□□□ -0.2
CHMP4B-201ENST00000217402 TRAV7A0A075B6U4 112 aa13.82□□□□□ -0.2
CHMP4B-201ENST00000217402 FAT4Q6V0I7 4981 aa13.82□□□□□ -0.2
CHMP4B-201ENST00000217402 LINC00208Q96KT6 92 aa13.81□□□□□ -0.2
CHMP4B-201ENST00000217402 C1orf64Q8NEQ6 169 aa13.8□□□□□ -0.2
CHMP4B-201ENST00000217402 CYP4F30PQ9H0H9 118 aa13.8□□□□□ -0.2
CHMP4B-201ENST00000217402 LCE2CQ5TA81 110 aa13.79□□□□□ -0.2
CHMP4B-201ENST00000217402 FAM236DA0A1B0GTK5 79 aa13.78□□□□□ -0.2
CHMP4B-201ENST00000217402 FAM236CP0DP71 79 aa13.78□□□□□ -0.2
CHMP4B-201ENST00000217402 C4orf26Q17RF5 130 aa13.72□□□□□ -0.21
CHMP4B-201ENST00000217402 H3BPC8 53 aa13.69□□□□□ -0.22
CHMP4B-201ENST00000217402 SERP2Q8N6R1 65 aa13.68□□□□□ -0.22
CHMP4B-201ENST00000217402 KLKP1Q107X0 134 aa13.61□□□□□ -0.23
CHMP4B-201ENST00000217402 MT1HP80294 61 aa13.57□□□□□ -0.24
CHMP4B-201ENST00000217402 SNURFQ9Y675 71 aa13.53□□□□□ -0.24
CHMP4B-201ENST00000217402 C20orf197Q8N268 126 aa13.52□□□□□ -0.25
CHMP4B-201ENST00000217402 LCE2AQ5TA79 106 aaPredicted RBP13.51□□□□□ -0.25
CHMP4B-201ENST00000217402 FLGP20930 4061 aaPredicted RBP13.51□□□□□ -0.25
CHMP4B-201ENST00000217402 ANAPC13Q9BS18 74 aa13.5□□□□□ -0.25
CHMP4B-201ENST00000217402 COX7CP15954 63 aa13.49□□□□□ -0.25
CHMP4B-201ENST00000217402 KRTAP3-1Q9BYR8 98 aa13.49□□□□□ -0.25
CHMP4B-201ENST00000217402 H1FX-AS1Q4G0G2 97 aa13.48□□□□□ -0.25
CHMP4B-201ENST00000217402 M0R2T5 61 aa13.43□□□□□ -0.26
CHMP4B-201ENST00000217402 A8MUN3 132 aa13.27□□□□□ -0.29
CHMP4B-201ENST00000217402 S4R3F8 94 aa13.25□□□□□ -0.29
CHMP4B-201ENST00000217402 DMAC1Q96GE9 116 aa13.21□□□□□ -0.29
CHMP4B-201ENST00000217402 CYSTM1Q9H1C7 97 aa13.21□□□□□ -0.29
CHMP4B-201ENST00000217402 CCDC179H3BU77 68 aa13.21□□□□□ -0.3
CHMP4B-201ENST00000217402 KRTAP10-6P60371 365 aaPredicted RBP13.18□□□□□ -0.3
CHMP4B-201ENST00000217402 LCA10Q71F78 164 aa13.18□□□□□ -0.3
CHMP4B-201ENST00000217402 NDUFC1O43677 76 aa13.13□□□□□ -0.31
CHMP4B-201ENST00000217402 SPANXA2-OT1Q8N9U9 137 aa13.13□□□□□ -0.31
CHMP4B-201ENST00000217402 LORP23490 312 aaPredicted RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 171.6 ms