RNA–Protein interactions for RNA: ENST00000182527.3

TRAM2-201, Transcript of translocation associated membrane protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM2, Length 6,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM2-201ENST00000182527 NIPBLQ6KC79 2804 aaeCLIP4.29□□□□□ -1.72
TRAM2-201ENST00000182527 KMT2BQ9UMN6 2715 aaPredicted RBP4.29□□□□□ -1.72
TRAM2-201ENST00000182527 MXRA5Q9NR99 2828 aa4.28□□□□□ -1.72
TRAM2-201ENST00000182527 KRTAP10-8P60410 259 aa4.28□□□□□ -1.72
TRAM2-201ENST00000182527 CENPEQ02224 2701 aa4.26□□□□□ -1.73
TRAM2-201ENST00000182527 Q75L30 129 aa4.26□□□□□ -1.73
TRAM2-201ENST00000182527 AKAP13Q12802 2813 aa4.24□□□□□ -1.73
TRAM2-201ENST00000182527 NF1P21359 2839 aa4.24□□□□□ -1.73
TRAM2-201ENST00000182527 STAB2Q8WWQ8 2551 aa4.24□□□□□ -1.73
TRAM2-201ENST00000182527 LINC01558Q9Y6Z2 57 aa4.24□□□□□ -1.73
TRAM2-201ENST00000182527 ZANQ9Y493 2812 aa4.24□□□□□ -1.73
TRAM2-201ENST00000182527 A8MUU9 505 aa4.23□□□□□ -1.73
TRAM2-201ENST00000182527 TENM4Q6N022 2769 aa4.23□□□□□ -1.73
TRAM2-201ENST00000182527 ZFHX4Q86UP3 3567 aa4.23□□□□□ -1.73
TRAM2-201ENST00000182527 ITPR2Q14571 2701 aa4.22□□□□□ -1.73
TRAM2-201ENST00000182527 C10orf95Q9H7T3 257 aa4.21□□□□□ -1.74
TRAM2-201ENST00000182527 SPRR1AP35321 89 aa4.21□□□□□ -1.74
TRAM2-201ENST00000182527 HRNRQ86YZ3 2850 aaPredicted RBP4.2□□□□□ -1.74
TRAM2-201ENST00000182527 EIF4EBP3O60516 100 aaPredicted RBP4.2□□□□□ -1.74
TRAM2-201ENST00000182527 MMP24-AS1A0A0U1RRL7 71 aa4.2□□□□□ -1.74
TRAM2-201ENST00000182527 CSMD1Q96PZ7 3565 aa4.18□□□□□ -1.74
TRAM2-201ENST00000182527 OCR1Q9BZK8 76 aa4.18□□□□□ -1.74
TRAM2-201ENST00000182527 ASPMQ8IZT6 3477 aa4.17□□□□□ -1.74
TRAM2-201ENST00000182527 CYSTM1Q9H1C7 97 aa4.16□□□□□ -1.74
TRAM2-201ENST00000182527 LRBAP50851 2863 aa4.15□□□□□ -1.74
TRAM2-201ENST00000182527 Q5XG85 94 aa4.15□□□□□ -1.74
TRAM2-201ENST00000182527 ASB16-AS1Q495Z4 193 aa4.14□□□□□ -1.75
TRAM2-201ENST00000182527 LINC00472Q9H8W2 130 aa4.14□□□□□ -1.75
TRAM2-201ENST00000182527 Q5VV11 94 aa4.14□□□□□ -1.75
TRAM2-201ENST00000182527 CRYBG3Q68DQ2 2970 aa4.13□□□□□ -1.75
TRAM2-201ENST00000182527 HIVEP1P15822 2718 aa4.12□□□□□ -1.75
TRAM2-201ENST00000182527 COL12A1Q99715 3063 aa4.12□□□□□ -1.75
TRAM2-201ENST00000182527 XP32Q5T750 250 aa4.11□□□□□ -1.75
TRAM2-201ENST00000182527 LAMA5O15230 3695 aa4.11□□□□□ -1.75
TRAM2-201ENST00000182527 A6NN06 94 aa4.1□□□□□ -1.75
TRAM2-201ENST00000182527 TNP1P09430 55 aa4.1□□□□□ -1.75
TRAM2-201ENST00000182527 SPENQ96T58 3664 aaKnown RBP4.09□□□□□ -1.75
TRAM2-201ENST00000182527 KRTAP26-1Q6PEX3 210 aa4.09□□□□□ -1.75
TRAM2-201ENST00000182527 CELSR1Q9NYQ6 3014 aa4.08□□□□□ -1.76
TRAM2-201ENST00000182527 NSD1Q96L73 2696 aaPredicted RBP4.08□□□□□ -1.76
TRAM2-201ENST00000182527 ZFHX3Q15911 3703 aa4.08□□□□□ -1.76
TRAM2-201ENST00000182527 SMG1Q96Q15 3661 aaKnown RBP4.08□□□□□ -1.76
TRAM2-201ENST00000182527 KRTAP13-2Q52LG2 175 aa4.06□□□□□ -1.76
TRAM2-201ENST00000182527 PP632Q6XCG6 107 aa4.06□□□□□ -1.76
TRAM2-201ENST00000182527 VWFP04275 2813 aa4.03□□□□□ -1.76
TRAM2-201ENST00000182527 RELNP78509 3460 aa4.02□□□□□ -1.77
TRAM2-201ENST00000182527 KRTAP11-1Q8IUC1 163 aa4.02□□□□□ -1.77
TRAM2-201ENST00000182527 UBR5O95071 2799 aaPredicted RBP4.01□□□□□ -1.77
TRAM2-201ENST00000182527 KRTAP25-1Q3LHN0 102 aa4.01□□□□□ -1.77
TRAM2-201ENST00000182527 KRTAP13-3Q3SY46 172 aa4□□□□□ -1.77
TRAM2-201ENST00000182527 APCP25054 2843 aa3.98□□□□□ -1.77
TRAM2-201ENST00000182527 UTP20O75691 2785 aaKnown RBP3.97□□□□□ -1.77
TRAM2-201ENST00000182527 OTOGQ6ZRI0 2925 aa3.96□□□□□ -1.77
TRAM2-201ENST00000182527 FBN2P35556 2912 aa3.96□□□□□ -1.78
TRAM2-201ENST00000182527 LORP23490 312 aaPredicted RBP3.95□□□□□ -1.78
TRAM2-201ENST00000182527 SVEP1Q4LDE5 3571 aa3.95□□□□□ -1.78
TRAM2-201ENST00000182527 NOTCH2NLQ7Z3S9 236 aa3.93□□□□□ -1.78
TRAM2-201ENST00000182527 A8MU10 97 aa3.93□□□□□ -1.78
TRAM2-201ENST00000182527 PKD1L1Q8TDX9 2849 aa3.93□□□□□ -1.78
TRAM2-201ENST00000182527 KRTAP4-16G5E9R7 235 aaPredicted RBP3.91□□□□□ -1.78
TRAM2-201ENST00000182527 TENM1Q9UKZ4 2725 aa3.91□□□□□ -1.78
TRAM2-201ENST00000182527 KRTAP1-4P0C5Y4 121 aa3.9□□□□□ -1.78
TRAM2-201ENST00000182527 BSNQ9UPA5 3926 aa3.9□□□□□ -1.79
TRAM2-201ENST00000182527 KRTAP4-5Q9BYR2 181 aa3.89□□□□□ -1.79
TRAM2-201ENST00000182527 TENM2Q9NT68 2774 aa3.87□□□□□ -1.79
TRAM2-201ENST00000182527 FBN3Q75N90 2809 aa3.85□□□□□ -1.79
TRAM2-201ENST00000182527 KRTAP13-1Q8IUC0 172 aa3.83□□□□□ -1.8
TRAM2-201ENST00000182527 PDZD2O15018 2839 aa3.82□□□□□ -1.8
TRAM2-201ENST00000182527 VPS13CQ709C8 3753 aa3.8□□□□□ -1.8
TRAM2-201ENST00000182527 H0YAA0 97 aa3.78□□□□□ -1.8
TRAM2-201ENST00000182527 CSMD2Q7Z408 3487 aa3.78□□□□□ -1.81
TRAM2-201ENST00000182527 CUBNO60494 3623 aa3.73□□□□□ -1.81
TRAM2-201ENST00000182527 CRCT1Q9UGL9 99 aa3.72□□□□□ -1.81
TRAM2-201ENST00000182527 MT1HL1P0DM35 61 aa3.7□□□□□ -1.82
TRAM2-201ENST00000182527 COL7A1Q02388 2944 aa3.68□□□□□ -1.82
TRAM2-201ENST00000182527 AKAP9Q99996 3911 aa3.67□□□□□ -1.82
TRAM2-201ENST00000182527 KRTAP17-1Q9BYP8 105 aa3.67□□□□□ -1.82
TRAM2-201ENST00000182527 KRTAP8-1Q8IUC2 63 aa3.66□□□□□ -1.82
TRAM2-201ENST00000182527 KRTAP7-1Q8IUC3 87 aa3.66□□□□□ -1.82
TRAM2-201ENST00000182527 TENM3Q9P273 2699 aa3.66□□□□□ -1.82
TRAM2-201ENST00000182527 NBEAL2Q6ZNJ1 2754 aa3.63□□□□□ -1.83
TRAM2-201ENST00000182527 FBN1P35555 2871 aaKnown RBP3.63□□□□□ -1.83
TRAM2-201ENST00000182527 ALMS1Q8TCU4 4167 aa3.62□□□□□ -1.83
TRAM2-201ENST00000182527 NBPF19A0A087WUL8 3843 aa3.62□□□□□ -1.83
TRAM2-201ENST00000182527 KRTAP9-6A0A140TA67 174 aa3.61□□□□□ -1.83
TRAM2-201ENST00000182527 KRTAP12-2P59991 146 aa3.58□□□□□ -1.84
TRAM2-201ENST00000182527 ZNF469Q96JG9 3925 aaPredicted RBP3.58□□□□□ -1.84
TRAM2-201ENST00000182527 SPRR2EP22531 72 aa3.52□□□□□ -1.85
TRAM2-201ENST00000182527 SPRR2BP35325 72 aa3.52□□□□□ -1.85
TRAM2-201ENST00000182527 SPRR2AP35326 72 aa3.52□□□□□ -1.85
TRAM2-201ENST00000182527 KRTAP15-1Q3LI76 137 aa3.51□□□□□ -1.85
TRAM2-201ENST00000182527 KRTAP10-6P60371 365 aaPredicted RBP3.51□□□□□ -1.85
TRAM2-201ENST00000182527 KRTAP9-2Q9BYQ4 174 aa3.49□□□□□ -1.85
TRAM2-201ENST00000182527 SRRM2Q9UQ35 2752 aaKnown RBP3.49□□□□□ -1.85
TRAM2-201ENST00000182527 SPRR2FQ96RM1 72 aa3.49□□□□□ -1.85
TRAM2-201ENST00000182527 SPRR5A0A1B0GTR4 108 aa3.47□□□□□ -1.85
TRAM2-201ENST00000182527 KRTAP10-4P60372 401 aaPredicted RBP3.45□□□□□ -1.86
TRAM2-201ENST00000182527 KRTAP13-4Q3LI77 160 aa3.44□□□□□ -1.86
TRAM2-201ENST00000182527 SPRR2DP22532 72 aa3.44□□□□□ -1.86
TRAM2-201ENST00000182527 KRTAP10-7P60409 375 aaPredicted RBP3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms