RNA–Protein interactions for RNA: ENSMUST00000027404.11

Ptprn-201, Transcript of Receptor-type tyrosine-protein phosphatase-like N, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptprn, Length 3,554 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptprn-201ENSMUST00000027404 Sh3bgrl2Q8BG73 107 aa12.69□□□□□ -0.38
Ptprn-201ENSMUST00000027404 Aqp6Q8C4A0 293 aa12.69□□□□□ -0.38
Ptprn-201ENSMUST00000027404 Errfi1Q99JZ7 461 aa12.69□□□□□ -0.38
Ptprn-201ENSMUST00000027404 Cnn3Q9DAW9 330 aaKnown RBP12.69□□□□□ -0.38
Ptprn-201ENSMUST00000027404 Nkx3-1P97436 237 aa12.68□□□□□ -0.38
Ptprn-201ENSMUST00000027404 PdpnQ62011 172 aa12.68□□□□□ -0.38
Ptprn-201ENSMUST00000027404 Gm15294V9GXA7 121 aa12.68□□□□□ -0.38
Ptprn-201ENSMUST00000027404 Gm45521A0A1B0GRK0 198 aa12.68□□□□□ -0.38
Ptprn-201ENSMUST00000027404 Ighv3-6P18531 116 aa12.68□□□□□ -0.38
Ptprn-201ENSMUST00000027404 Olfr976Q8VF15 326 aa12.68□□□□□ -0.38
Ptprn-201ENSMUST00000027404 PpdpfQ9CR37 115 aa12.68□□□□□ -0.38
Ptprn-201ENSMUST00000027404 Ccdc71lE9Q4T4 218 aa12.68□□□□□ -0.38
Ptprn-201ENSMUST00000027404 Rbfox3Q8BIF2 374 aa12.68□□□□□ -0.38
Ptprn-201ENSMUST00000027404 Necap2Q9D1J1 266 aa12.68□□□□□ -0.38
Ptprn-201ENSMUST00000027404 KprpB2RUR4 657 aa12.67□□□□□ -0.38
Ptprn-201ENSMUST00000027404 Zfp119aQ9JIC0 545 aa12.67□□□□□ -0.38
Ptprn-201ENSMUST00000027404 Sec11aQ9R0P6 179 aa12.67□□□□□ -0.38
Ptprn-201ENSMUST00000027404 Tmem141A2AJB2 108 aa12.67□□□□□ -0.38
Ptprn-201ENSMUST00000027404 Mrpl33Q9CQP0 65 aa12.67□□□□□ -0.38
Ptprn-201ENSMUST00000027404 8030423J24RikQ9CX45 142 aa12.67□□□□□ -0.38
Ptprn-201ENSMUST00000027404 Rtl10D3YWW5 146 aa12.66□□□□□ -0.38
Ptprn-201ENSMUST00000027404 P04943 107 aa12.66□□□□□ -0.38
Ptprn-201ENSMUST00000027404 Spsb3Q571F5 354 aa12.66□□□□□ -0.38
Ptprn-201ENSMUST00000027404 Olfr810Q8VFH9 312 aa12.66□□□□□ -0.38
Ptprn-201ENSMUST00000027404 4930412O13RikQ9D5M9 106 aa12.66□□□□□ -0.38
Ptprn-201ENSMUST00000027404 Vmn1r63Q9EPT1 300 aa12.66□□□□□ -0.38
Ptprn-201ENSMUST00000027404 Slc25a20Q9Z2Z6 301 aaKnown RBP12.66□□□□□ -0.38
Ptprn-201ENSMUST00000027404 Trav16nA0A075B634 117 aa12.66□□□□□ -0.38
Ptprn-201ENSMUST00000027404 Gm29289A0A087WPY7 166 aa12.66□□□□□ -0.38
Ptprn-201ENSMUST00000027404 Gm4064A0A087WR82 380 aa12.66□□□□□ -0.38
Ptprn-201ENSMUST00000027404 Gm10352B2RWR6 380 aa12.66□□□□□ -0.38
Ptprn-201ENSMUST00000027404 Zfp493E9Q1L8 384 aa12.66□□□□□ -0.38
Ptprn-201ENSMUST00000027404 Olfr235E9Q9Z6 312 aa12.66□□□□□ -0.38
Ptprn-201ENSMUST00000027404 Gm21693J3QK27 380 aa12.66□□□□□ -0.38
Ptprn-201ENSMUST00000027404 Itgb1bp1O35671 200 aa12.66□□□□□ -0.38
Ptprn-201ENSMUST00000027404 Rbmy1a1O35698 380 aa12.66□□□□□ -0.38
Ptprn-201ENSMUST00000027404 Defa24Q5G865 93 aa12.66□□□□□ -0.38
Ptprn-201ENSMUST00000027404 Ccsmst1Q6RUT7 136 aa12.66□□□□□ -0.38
Ptprn-201ENSMUST00000027404 Hif1anQ8BLR9 349 aa12.66□□□□□ -0.38
Ptprn-201ENSMUST00000027404 Spink6Q8BT20 105 aa12.66□□□□□ -0.38
Ptprn-201ENSMUST00000027404 Gm26566Q8CAC1 153 aa12.66□□□□□ -0.38
Ptprn-201ENSMUST00000027404 Tspo2Q9CRZ8 162 aa12.66□□□□□ -0.38
Ptprn-201ENSMUST00000027404 Dido1Q8C9B9 2256 aaKnown RBP12.66□□□□□ -0.38
Ptprn-201ENSMUST00000027404 NbeaQ9EPN1 2936 aa12.66□□□□□ -0.38
Ptprn-201ENSMUST00000027404 YrdcQ3U5F4 280 aa12.66□□□□□ -0.38
Ptprn-201ENSMUST00000027404 Mrpl16Q99N93 251 aa12.66□□□□□ -0.38
Ptprn-201ENSMUST00000027404 Cks1brtQ3UNC9 96 aa12.65□□□□□ -0.38
Ptprn-201ENSMUST00000027404 Vmn1r62Q8R2C0 300 aa12.65□□□□□ -0.38
Ptprn-201ENSMUST00000027404 Defa37K9J724 93 aa12.65□□□□□ -0.38
Ptprn-201ENSMUST00000027404 CntfrO88507 372 aa12.65□□□□□ -0.38
Ptprn-201ENSMUST00000027404 Gosr1O88630 250 aa12.65□□□□□ -0.38
Ptprn-201ENSMUST00000027404 Tmem95P0DJF3 176 aa12.65□□□□□ -0.38
Ptprn-201ENSMUST00000027404 Defa5P28312 93 aa12.65□□□□□ -0.38
Ptprn-201ENSMUST00000027404 Ighv14-3A0A075B5R9 117 aa12.65□□□□□ -0.38
Ptprn-201ENSMUST00000027404 Trav6d-7A0A075B6B0 112 aa12.65□□□□□ -0.38
Ptprn-201ENSMUST00000027404 Ighv8-4A0A0A6YW26 117 aa12.65□□□□□ -0.38
Ptprn-201ENSMUST00000027404 Smad7O35253 426 aa12.65□□□□□ -0.38
Ptprn-201ENSMUST00000027404 CrxO54751 299 aa12.65□□□□□ -0.38
Ptprn-201ENSMUST00000027404 Dnajc30P59041 219 aa12.65□□□□□ -0.38
Ptprn-201ENSMUST00000027404 Mrpl53Q9D1H8 118 aaKnown RBP12.65□□□□□ -0.38
Ptprn-201ENSMUST00000027404 Gnb1lQ9EQ15 326 aa12.65□□□□□ -0.38
Ptprn-201ENSMUST00000027404 Cend1Q9JKC6 149 aa12.65□□□□□ -0.38
Ptprn-201ENSMUST00000027404 Tmem116A0A0G2JGD3 401 aa12.64□□□□□ -0.39
Ptprn-201ENSMUST00000027404 TbpP29037 316 aa12.64□□□□□ -0.39
Ptprn-201ENSMUST00000027404 Tcf15Q60756 195 aa12.64□□□□□ -0.39
Ptprn-201ENSMUST00000027404 Insig2Q91WG1 225 aa12.64□□□□□ -0.39
Ptprn-201ENSMUST00000027404 Srd5a2Q99N99 254 aa12.64□□□□□ -0.39
Ptprn-201ENSMUST00000027404 Wfdc2Q9DAU7 174 aa12.64□□□□□ -0.39
Ptprn-201ENSMUST00000027404 Rnf114Q9ET26 229 aa12.64□□□□□ -0.39
Ptprn-201ENSMUST00000027404 AcanQ61282 2132 aaKnown RBP12.64□□□□□ -0.39
Ptprn-201ENSMUST00000027404 Ighv1-81A0A075B5Y4 117 aa12.64□□□□□ -0.39
Ptprn-201ENSMUST00000027404 Q9D727 114 aa12.64□□□□□ -0.39
Ptprn-201ENSMUST00000027404 Ramp1Q9WTJ5 148 aa12.64□□□□□ -0.39
Ptprn-201ENSMUST00000027404 Cox8bP48772 70 aa12.64□□□□□ -0.39
Ptprn-201ENSMUST00000027404 Rasl11aQ6IMB1 242 aa12.64□□□□□ -0.39
Ptprn-201ENSMUST00000027404 Dkk4Q8VEJ3 221 aa12.64□□□□□ -0.39
Ptprn-201ENSMUST00000027404 CklfQ9DAS1 152 aa12.64□□□□□ -0.39
Ptprn-201ENSMUST00000027404 Rabac1Q9Z0S9 185 aa12.64□□□□□ -0.39
Ptprn-201ENSMUST00000027404 Ighv1-69A0A0G2JFS5 117 aa12.63□□□□□ -0.39
Ptprn-201ENSMUST00000027404 Trav7-5A0A0G2JFX6 112 aa12.63□□□□□ -0.39
Ptprn-201ENSMUST00000027404 P0C913 63 aa12.63□□□□□ -0.39
Ptprn-201ENSMUST00000027404 Defa3P28310 93 aa12.63□□□□□ -0.39
Ptprn-201ENSMUST00000027404 Defa10P50708 93 aa12.63□□□□□ -0.39
Ptprn-201ENSMUST00000027404 Defa15P50713 93 aa12.63□□□□□ -0.39
Ptprn-201ENSMUST00000027404 Dlx6P70397 175 aa12.63□□□□□ -0.39
Ptprn-201ENSMUST00000027404 AcacbE9Q4Z2 2448 aa12.63□□□□□ -0.39
Ptprn-201ENSMUST00000027404 Gm45753A0A1C7CYU8 86 aa12.63□□□□□ -0.39
Ptprn-201ENSMUST00000027404 Muc15Q8C6Z1 331 aa12.63□□□□□ -0.39
Ptprn-201ENSMUST00000027404 Sorl1O88307 2215 aaKnown RBP12.63□□□□□ -0.39
Ptprn-201ENSMUST00000027404 NbasE9Q411 2356 aa12.63□□□□□ -0.39
Ptprn-201ENSMUST00000027404 Trav14n-2A0A0G2JDF5 121 aa12.63□□□□□ -0.39
Ptprn-201ENSMUST00000027404 Gm1968Q3T9I3 115 aa12.63□□□□□ -0.39
Ptprn-201ENSMUST00000027404 Gm12888Q3UW77 119 aa12.63□□□□□ -0.39
Ptprn-201ENSMUST00000027404 Olfr1199Q8VF94 310 aa12.63□□□□□ -0.39
Ptprn-201ENSMUST00000027404 Rchy1Q9CR50 261 aa12.63□□□□□ -0.39
Ptprn-201ENSMUST00000027404 Tnfrsf23Q9ER63 176 aa12.63□□□□□ -0.39
Ptprn-201ENSMUST00000027404 Gm28778A0A087WSK7 233 aa12.62□□□□□ -0.39
Ptprn-201ENSMUST00000027404 Tmem238A9JSM3 176 aa12.62□□□□□ -0.39
Ptprn-201ENSMUST00000027404 Tmem8bB1AWJ5 472 aa12.62□□□□□ -0.39
Ptprn-201ENSMUST00000027404 SbpP15501 199 aa12.62□□□□□ -0.39
Retrieved 100 of 22,080 RNA–protein pairs in 46 ms