RNA–Protein interactions for RNA: ENST00000641811.1

PHGDH-227, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,031 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-227ENST00000641811 BVES-AS1Q5T3Y7 98 aa9.73□□□□□ -0.85
PHGDH-227ENST00000641811 FXYD2P54710 66 aa9.72□□□□□ -0.85
PHGDH-227ENST00000641811 PCP4L1A6NKN8 68 aa9.7□□□□□ -0.86
PHGDH-227ENST00000641811 KRTAP13-3Q3SY46 172 aa9.69□□□□□ -0.86
PHGDH-227ENST00000641811 TMEM238LA0A1B0GVL6 79 aa9.68□□□□□ -0.86
PHGDH-227ENST00000641811 A6NJY4 79 aa9.68□□□□□ -0.86
PHGDH-227ENST00000641811 PRO1854Q9UHT4 67 aa9.68□□□□□ -0.86
PHGDH-227ENST00000641811 CD164Q04900 197 aa9.67□□□□□ -0.86
PHGDH-227ENST00000641811 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.67□□□□□ -0.86
PHGDH-227ENST00000641811 HSD52Q0P140 79 aa9.66□□□□□ -0.86
PHGDH-227ENST00000641811 LIMD2Q9BT23 127 aa9.66□□□□□ -0.86
PHGDH-227ENST00000641811 F8WEM9 126 aa9.65□□□□□ -0.86
PHGDH-227ENST00000641811 FAM218AQ96MZ4 157 aa9.65□□□□□ -0.86
PHGDH-227ENST00000641811 H0YGX0 51 aa9.63□□□□□ -0.87
PHGDH-227ENST00000641811 K7ERJ3 54 aa9.62□□□□□ -0.87
PHGDH-227ENST00000641811 M0R143 59 aa9.62□□□□□ -0.87
PHGDH-227ENST00000641811 MUC2Q02817 5179 aa9.61□□□□□ -0.87
PHGDH-227ENST00000641811 TRIAP1O43715 76 aa9.6□□□□□ -0.87
PHGDH-227ENST00000641811 OCIAD2Q56VL3 154 aa9.6□□□□□ -0.87
PHGDH-227ENST00000641811 IGLV8-61A0A075B6I0 122 aa9.59□□□□□ -0.87
PHGDH-227ENST00000641811 PPDPFLQ8WWR9 84 aa9.59□□□□□ -0.87
PHGDH-227ENST00000641811 SNHG12Q9BXW3 62 aa9.59□□□□□ -0.87
PHGDH-227ENST00000641811 Q5XG85 94 aa9.58□□□□□ -0.88
PHGDH-227ENST00000641811 IGFL1Q6UW32 110 aa9.58□□□□□ -0.88
PHGDH-227ENST00000641811 SNCGO76070 127 aa9.57□□□□□ -0.88
PHGDH-227ENST00000641811 Q6JHZ5 121 aa9.57□□□□□ -0.88
PHGDH-227ENST00000641811 H3BUT2 72 aa9.56□□□□□ -0.88
PHGDH-227ENST00000641811 C1orf195Q5TG92 126 aa9.56□□□□□ -0.88
PHGDH-227ENST00000641811 CLEC2BQ92478 149 aa9.56□□□□□ -0.88
PHGDH-227ENST00000641811 PSMB2P49721 201 aa9.54□□□□□ -0.88
PHGDH-227ENST00000641811 MUC17Q685J3 4493 aa9.53□□□□□ -0.88
PHGDH-227ENST00000641811 A0A1B0GX51 115 aa9.53□□□□□ -0.88
PHGDH-227ENST00000641811 C9orf92A6NGG3 77 aa9.52□□□□□ -0.89
PHGDH-227ENST00000641811 BATFQ16520 125 aa9.52□□□□□ -0.89
PHGDH-227ENST00000641811 XP32Q5T750 250 aa9.52□□□□□ -0.89
PHGDH-227ENST00000641811 TCL1BO95988 128 aa9.51□□□□□ -0.89
PHGDH-227ENST00000641811 NDUFV3P56181 108 aaKnown RBP9.51□□□□□ -0.89
PHGDH-227ENST00000641811 TRBV7-7A0A0K0K1E9 115 aa9.5□□□□□ -0.89
PHGDH-227ENST00000641811 FABP2P12104 132 aa9.5□□□□□ -0.89
PHGDH-227ENST00000641811 ASB16-AS1Q495Z4 193 aa9.5□□□□□ -0.89
PHGDH-227ENST00000641811 COX6CP09669 75 aa9.47□□□□□ -0.89
PHGDH-227ENST00000641811 COL5A1-AS1Q5SY13 56 aa9.47□□□□□ -0.89
PHGDH-227ENST00000641811 SEC61BP60468 96 aaKnown RBP9.46□□□□□ -0.9
PHGDH-227ENST00000641811 H3BMG7 143 aa9.45□□□□□ -0.9
PHGDH-227ENST00000641811 DNAL4O96015 105 aa9.44□□□□□ -0.9
PHGDH-227ENST00000641811 KRTAP4-1Q9BYQ7 146 aa9.44□□□□□ -0.9
PHGDH-227ENST00000641811 GHRHP01286 108 aa9.43□□□□□ -0.9
PHGDH-227ENST00000641811 ORMDL1Q9P0S3 153 aa9.43□□□□□ -0.9
PHGDH-227ENST00000641811 A0A0U1RQV1 116 aa9.41□□□□□ -0.9
PHGDH-227ENST00000641811 A0A1B0GV72 72 aa9.41□□□□□ -0.9
PHGDH-227ENST00000641811 SCGB1C2P0DMR2 95 aa9.41□□□□□ -0.9
PHGDH-227ENST00000641811 Q6Q795 121 aa9.4□□□□□ -0.9
PHGDH-227ENST00000641811 TEN1Q86WV5 123 aa9.39□□□□□ -0.91
PHGDH-227ENST00000641811 LST1O00453 97 aa9.37□□□□□ -0.91
PHGDH-227ENST00000641811 NAA38Q9BRA0 125 aaKnown RBP9.37□□□□□ -0.91
PHGDH-227ENST00000641811 A0A1W2PNM2 257 aa9.36□□□□□ -0.91
PHGDH-227ENST00000641811 TMEM256-PLSCR3K7ERE1 68 aa9.36□□□□□ -0.91
PHGDH-227ENST00000641811 TAX1BP3O14907 124 aa9.36□□□□□ -0.91
PHGDH-227ENST00000641811 TRACP01848 142 aa9.36□□□□□ -0.91
PHGDH-227ENST00000641811 PCOTHQ58A44 107 aa9.36□□□□□ -0.91
PHGDH-227ENST00000641811 A0A087WSZ3 146 aa9.35□□□□□ -0.91
PHGDH-227ENST00000641811 H3BQ85 93 aa9.35□□□□□ -0.91
PHGDH-227ENST00000641811 C9orf118A6NHY6 69 aa9.34□□□□□ -0.91
PHGDH-227ENST00000641811 ANKRD29Q8N6D5 301 aa9.34□□□□□ -0.91
PHGDH-227ENST00000641811 SS18L2Q9UHA2 77 aa9.34□□□□□ -0.91
PHGDH-227ENST00000641811 FAT4Q6V0I7 4981 aa9.33□□□□□ -0.92
PHGDH-227ENST00000641811 UBE2V1Q13404 147 aa9.31□□□□□ -0.92
PHGDH-227ENST00000641811 LYRM7Q5U5X0 104 aa9.3□□□□□ -0.92
PHGDH-227ENST00000641811 OBSCN-AS1Q96MR7 158 aa9.29□□□□□ -0.92
PHGDH-227ENST00000641811 A0A1W2PPM0 123 aa9.28□□□□□ -0.92
PHGDH-227ENST00000641811 BAALC-AS2P0C853 105 aa9.28□□□□□ -0.92
PHGDH-227ENST00000641811 RPL37P61927 97 aaKnown RBP9.28□□□□□ -0.92
PHGDH-227ENST00000641811 Q96NJ1 140 aa9.28□□□□□ -0.92
PHGDH-227ENST00000641811 TRBV7-4A0A0J9YYF1 115 aa9.27□□□□□ -0.93
PHGDH-227ENST00000641811 LCE2AQ5TA79 106 aaPredicted RBP9.27□□□□□ -0.93
PHGDH-227ENST00000641811 CCKP06307 115 aa9.26□□□□□ -0.93
PHGDH-227ENST00000641811 ATXN8Q156A1 80 aa9.25□□□□□ -0.93
PHGDH-227ENST00000641811 TRBV20-1A0A075B6N2 111 aa9.23□□□□□ -0.93
PHGDH-227ENST00000641811 RBM3P98179 157 aaKnown RBP9.23□□□□□ -0.93
PHGDH-227ENST00000641811 VPS25Q9BRG1 176 aa9.22□□□□□ -0.93
PHGDH-227ENST00000641811 GTF2H5Q6ZYL4 71 aa9.2□□□□□ -0.94
PHGDH-227ENST00000641811 DSCR8Q96T75 97 aa9.2□□□□□ -0.94
PHGDH-227ENST00000641811 SIGMAR1Q99720 223 aa9.2□□□□□ -0.94
PHGDH-227ENST00000641811 SPCS1Q9Y6A9 102 aa9.2□□□□□ -0.94
PHGDH-227ENST00000641811 A0A1B0GV90 55 aa9.19□□□□□ -0.94
PHGDH-227ENST00000641811 DEFB116Q30KQ4 102 aa9.19□□□□□ -0.94
PHGDH-227ENST00000641811 IGKV4-1P06312 121 aa9.18□□□□□ -0.94
PHGDH-227ENST00000641811 K7EP34 96 aa9.17□□□□□ -0.94
PHGDH-227ENST00000641811 C9JAW5 83 aa9.16□□□□□ -0.94
PHGDH-227ENST00000641811 DSCR10P59022 87 aa9.16□□□□□ -0.94
PHGDH-227ENST00000641811 Q75L30 129 aa9.16□□□□□ -0.94
PHGDH-227ENST00000641811 LINC00472Q9H8W2 130 aa9.16□□□□□ -0.94
PHGDH-227ENST00000641811 KRTAP19-2Q3LHN2 52 aa9.15□□□□□ -0.94
PHGDH-227ENST00000641811 LCE2CQ5TA81 110 aa9.14□□□□□ -0.95
PHGDH-227ENST00000641811 ATP11AUNQ6ZP68 121 aa9.12□□□□□ -0.95
PHGDH-227ENST00000641811 JMJD7-PLA2G4BH0Y9G9 81 aa9.11□□□□□ -0.95
PHGDH-227ENST00000641811 Q6ZQT0 140 aa9.1□□□□□ -0.95
PHGDH-227ENST00000641811 NOTCH2NLQ7Z3S9 236 aa9.1□□□□□ -0.95
PHGDH-227ENST00000641811 C20orf166-AS1Q96NR2 134 aa9.1□□□□□ -0.95
PHGDH-227ENST00000641811 A8MUU9 505 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms