RNA–Protein interactions for RNA: ENST00000640765.1

TRPS1-212, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 2 BASIC

Gene TRPS1, Length 9,514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-212ENST00000640765 KRTAP10-9P60411 292 aa5.36□□□□□ -1.55
TRPS1-212ENST00000640765 PCNTO95613 3336 aa5.36□□□□□ -1.55
TRPS1-212ENST00000640765 ZCCHC13Q8WW36 166 aaKnown RBP5.34□□□□□ -1.55
TRPS1-212ENST00000640765 CEP350Q5VT06 3117 aa5.33□□□□□ -1.56
TRPS1-212ENST00000640765 A0A087WTM6 91 aa5.32□□□□□ -1.56
TRPS1-212ENST00000640765 CYSTM1Q9H1C7 97 aa5.32□□□□□ -1.56
TRPS1-212ENST00000640765 A0A1W2PPR1 153 aa5.32□□□□□ -1.56
TRPS1-212ENST00000640765 NDUFAF8A1L188 74 aa5.32□□□□□ -1.56
TRPS1-212ENST00000640765 APCP25054 2843 aa5.32□□□□□ -1.56
TRPS1-212ENST00000640765 WWC2-AS2Q96NR7 200 aa5.32□□□□□ -1.56
TRPS1-212ENST00000640765 TEX15Q9BXT5 2789 aa5.31□□□□□ -1.56
TRPS1-212ENST00000640765 KRTAP25-1Q3LHN0 102 aa5.31□□□□□ -1.56
TRPS1-212ENST00000640765 TEP1Q99973 2627 aaKnown RBP5.31□□□□□ -1.56
TRPS1-212ENST00000640765 GOLGB1Q14789 3259 aaKnown RBP5.3□□□□□ -1.56
TRPS1-212ENST00000640765 UTP20O75691 2785 aaKnown RBP5.29□□□□□ -1.56
TRPS1-212ENST00000640765 GIG44P09565 113 aaPredicted RBP5.29□□□□□ -1.56
TRPS1-212ENST00000640765 Q5W150 140 aa5.29□□□□□ -1.56
TRPS1-212ENST00000640765 MMP24-AS1A0A0U1RRL7 71 aa5.29□□□□□ -1.56
TRPS1-212ENST00000640765 C20orf166-AS1Q96NR2 134 aa5.29□□□□□ -1.56
TRPS1-212ENST00000640765 LINC00612Q8N6U2 182 aa5.27□□□□□ -1.57
TRPS1-212ENST00000640765 M0QZ58 72 aa5.26□□□□□ -1.57
TRPS1-212ENST00000640765 SPATA8Q6RVD6 105 aa5.24□□□□□ -1.57
TRPS1-212ENST00000640765 ITPR2Q14571 2701 aa5.24□□□□□ -1.57
TRPS1-212ENST00000640765 OXTP01178 125 aa5.24□□□□□ -1.57
TRPS1-212ENST00000640765 SMR3BP02814 79 aaPredicted RBP5.24□□□□□ -1.57
TRPS1-212ENST00000640765 CFAP54Q96N23 3096 aa5.23□□□□□ -1.57
TRPS1-212ENST00000640765 A6NN06 94 aa5.23□□□□□ -1.57
TRPS1-212ENST00000640765 Q8NDZ9 215 aa5.22□□□□□ -1.57
TRPS1-212ENST00000640765 IGSF10Q6WRI0 2623 aa5.22□□□□□ -1.57
TRPS1-212ENST00000640765 FLNBO75369 2602 aaKnown RBP5.22□□□□□ -1.57
TRPS1-212ENST00000640765 LINC00472Q9H8W2 130 aa5.2□□□□□ -1.58
TRPS1-212ENST00000640765 Q6ZR54 194 aa5.19□□□□□ -1.58
TRPS1-212ENST00000640765 MAP1AP78559 2803 aaPredicted RBP5.18□□□□□ -1.58
TRPS1-212ENST00000640765 DSPP15924 2871 aaKnown RBP5.18□□□□□ -1.58
TRPS1-212ENST00000640765 A0A096LNT2 108 aa5.17□□□□□ -1.58
TRPS1-212ENST00000640765 ADM2Q7Z4H4 148 aa5.17□□□□□ -1.58
TRPS1-212ENST00000640765 DNAH12Q6ZR08 3092 aa5.17□□□□□ -1.58
TRPS1-212ENST00000640765 A0A087X002 238 aa5.16□□□□□ -1.58
TRPS1-212ENST00000640765 KRTAP10-11P60412 298 aa5.16□□□□□ -1.58
TRPS1-212ENST00000640765 ITPR1Q14643 2758 aa5.16□□□□□ -1.58
TRPS1-212ENST00000640765 LAMA2P24043 3122 aaKnown RBP5.15□□□□□ -1.59
TRPS1-212ENST00000640765 UTRNP46939 3433 aa5.15□□□□□ -1.59
TRPS1-212ENST00000640765 SETXQ7Z333 2677 aaKnown RBP5.14□□□□□ -1.59
TRPS1-212ENST00000640765 PANO1I0J062 215 aa5.14□□□□□ -1.59
TRPS1-212ENST00000640765 KRTAP24-1Q3LI83 254 aa5.14□□□□□ -1.59
TRPS1-212ENST00000640765 A0A0C4DFX4 3053 aa5.13□□□□□ -1.59
TRPS1-212ENST00000640765 UBR5O95071 2799 aaPredicted RBP5.13□□□□□ -1.59
TRPS1-212ENST00000640765 ZNF292O60281 2723 aa5.13□□□□□ -1.59
TRPS1-212ENST00000640765 K7EIL1 84 aa5.12□□□□□ -1.59
TRPS1-212ENST00000640765 CASC10Q5T4H9 136 aa5.12□□□□□ -1.59
TRPS1-212ENST00000640765 C5orf42Q9H799 3197 aa5.11□□□□□ -1.59
TRPS1-212ENST00000640765 SPRR1AP35321 89 aa5.09□□□□□ -1.59
TRPS1-212ENST00000640765 LRBAP50851 2863 aa5.09□□□□□ -1.59
TRPS1-212ENST00000640765 C10orf95Q9H7T3 257 aa5.09□□□□□ -1.59
TRPS1-212ENST00000640765 CHD9Q3L8U1 2897 aa5.07□□□□□ -1.6
TRPS1-212ENST00000640765 KRTAP26-1Q6PEX3 210 aa5.07□□□□□ -1.6
TRPS1-212ENST00000640765 SPRR1BP22528 89 aa5.06□□□□□ -1.6
TRPS1-212ENST00000640765 NBEAL2Q6ZNJ1 2754 aa5.06□□□□□ -1.6
TRPS1-212ENST00000640765 PLAC8Q9NZF1 115 aa5.05□□□□□ -1.6
TRPS1-212ENST00000640765 PP632Q6XCG6 107 aa5.04□□□□□ -1.6
TRPS1-212ENST00000640765 A8MUU9 505 aa5.04□□□□□ -1.6
TRPS1-212ENST00000640765 REV3LO60673 3130 aa5.04□□□□□ -1.6
TRPS1-212ENST00000640765 TRANK1O15050 2925 aa5.02□□□□□ -1.61
TRPS1-212ENST00000640765 TNP1P09430 55 aa5□□□□□ -1.61
TRPS1-212ENST00000640765 TRIOO75962 3097 aa4.97□□□□□ -1.61
TRPS1-212ENST00000640765 MGAQ8IWI9 3026 aa4.97□□□□□ -1.61
TRPS1-212ENST00000640765 FREM2Q5SZK8 3169 aa4.97□□□□□ -1.61
TRPS1-212ENST00000640765 CHD7Q9P2D1 2997 aa4.97□□□□□ -1.61
TRPS1-212ENST00000640765 KRTAP11-1Q8IUC1 163 aa4.97□□□□□ -1.61
TRPS1-212ENST00000640765 A8MU10 97 aa4.97□□□□□ -1.61
TRPS1-212ENST00000640765 KRTAP29-1A8MX34 341 aaPredicted RBP4.96□□□□□ -1.61
TRPS1-212ENST00000640765 KRTAP10-3P60369 221 aa4.96□□□□□ -1.61
TRPS1-212ENST00000640765 FRYLO94915 3013 aa4.96□□□□□ -1.62
TRPS1-212ENST00000640765 KALRNO60229 2985 aa4.93□□□□□ -1.62
TRPS1-212ENST00000640765 HTTP42858 3142 aa4.91□□□□□ -1.62
TRPS1-212ENST00000640765 LCE6AA0A183 80 aa4.91□□□□□ -1.62
TRPS1-212ENST00000640765 KRTAP4-16G5E9R7 235 aaPredicted RBP4.91□□□□□ -1.62
TRPS1-212ENST00000640765 FRYQ5TBA9 3013 aa4.89□□□□□ -1.63
TRPS1-212ENST00000640765 ASH1LQ9NR48 2969 aaKnown RBP4.88□□□□□ -1.63
TRPS1-212ENST00000640765 RANBP2P49792 3224 aaKnown RBP4.87□□□□□ -1.63
TRPS1-212ENST00000640765 TENM3Q9P273 2699 aa4.86□□□□□ -1.63
TRPS1-212ENST00000640765 VPS13AQ96RL7 3174 aa4.85□□□□□ -1.63
TRPS1-212ENST00000640765 COL12A1Q99715 3063 aa4.85□□□□□ -1.63
TRPS1-212ENST00000640765 RPS29P62273 56 aaKnown RBP4.84□□□□□ -1.63
TRPS1-212ENST00000640765 Q5VSD8 79 aa4.84□□□□□ -1.63
TRPS1-212ENST00000640765 P0C880 135 aa4.83□□□□□ -1.64
TRPS1-212ENST00000640765 SRRM2Q9UQ35 2752 aaKnown RBP4.83□□□□□ -1.64
TRPS1-212ENST00000640765 XIRP2A4UGR9 3374 aa4.82□□□□□ -1.64
TRPS1-212ENST00000640765 NOTCH2NLQ7Z3S9 236 aa4.82□□□□□ -1.64
TRPS1-212ENST00000640765 WDFY4Q6ZS81 3184 aa4.8□□□□□ -1.64
TRPS1-212ENST00000640765 PRUNE2Q8WUY3 3088 aa4.78□□□□□ -1.64
TRPS1-212ENST00000640765 BRCA2P51587 3418 aa4.77□□□□□ -1.65
TRPS1-212ENST00000640765 CRYBG3Q68DQ2 2970 aa4.76□□□□□ -1.65
TRPS1-212ENST00000640765 TGP01266 2768 aa4.76□□□□□ -1.65
TRPS1-212ENST00000640765 NIPBLQ6KC79 2804 aaeCLIP4.76□□□□□ -1.65
TRPS1-212ENST00000640765 NF1P21359 2839 aa4.75□□□□□ -1.65
TRPS1-212ENST00000640765 UNC80Q8N2C7 3258 aa4.75□□□□□ -1.65
TRPS1-212ENST00000640765 TENM1Q9UKZ4 2725 aa4.73□□□□□ -1.65
TRPS1-212ENST00000640765 FLNCQ14315 2725 aa4.73□□□□□ -1.65
TRPS1-212ENST00000640765 PDZD2O15018 2839 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms