RNA–Protein interactions for RNA: ENST00000639092.1

ARHGEF9-238, Transcript of Cdc42 guanine nucleotide exchange factor 9, human

TSL 5

Gene ARHGEF9, Length 4,657 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGEF9-238	ENST00000639092	UNC80	Q8N2C7	3258 aa		5.4	□□□□□ -1.55
ARHGEF9-238	ENST00000639092	RBM12B-AS1	Q9P1G2	102 aa		5.39	□□□□□ -1.55
ARHGEF9-238	ENST00000639092	REV3L	O60673	3130 aa		5.39	□□□□□ -1.55
ARHGEF9-238	ENST00000639092	FAM229B	Q4G0N7	80 aa		5.39	□□□□□ -1.55
ARHGEF9-238	ENST00000639092	MAP1A	P78559	2803 aa	Predicted RBP	5.39	□□□□□ -1.55
ARHGEF9-238	ENST00000639092	ZFHX3	Q15911	3703 aa		5.38	□□□□□ -1.55
ARHGEF9-238	ENST00000639092	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	5.38	□□□□□ -1.55
ARHGEF9-238	ENST00000639092	FLG2	Q5D862	2391 aa	Predicted RBP	5.38	□□□□□ -1.55
ARHGEF9-238	ENST00000639092	PRUNE2	Q8WUY3	3088 aa		5.36	□□□□□ -1.55
ARHGEF9-238	ENST00000639092		A8MUN3	132 aa		5.36	□□□□□ -1.55
ARHGEF9-238	ENST00000639092	PLAC8	Q9NZF1	115 aa		5.36	□□□□□ -1.55
ARHGEF9-238	ENST00000639092	SPANXA2-OT1	Q8N9U9	137 aa		5.36	□□□□□ -1.55
ARHGEF9-238	ENST00000639092	CFAP54	Q96N23	3096 aa		5.36	□□□□□ -1.55
ARHGEF9-238	ENST00000639092		H7BZZ5	65 aa		5.35	□□□□□ -1.55
ARHGEF9-238	ENST00000639092	NSD1	Q96L73	2696 aa	Predicted RBP	5.35	□□□□□ -1.55
ARHGEF9-238	ENST00000639092	WDFY4	Q6ZS81	3184 aa		5.35	□□□□□ -1.55
ARHGEF9-238	ENST00000639092	SPTBN5	Q9NRC6	3674 aa	Known RBP	5.35	□□□□□ -1.55
ARHGEF9-238	ENST00000639092	SPRR1A	P35321	89 aa		5.34	□□□□□ -1.55
ARHGEF9-238	ENST00000639092	COL6A3	P12111	3177 aa		5.33	□□□□□ -1.56
ARHGEF9-238	ENST00000639092	STAB2	Q8WWQ8	2551 aa		5.33	□□□□□ -1.56
ARHGEF9-238	ENST00000639092	KRTAP21-3	Q3LHN1	58 aa		5.32	□□□□□ -1.56
ARHGEF9-238	ENST00000639092	PRR26	Q8N8Z3	221 aa		5.32	□□□□□ -1.56
ARHGEF9-238	ENST00000639092	IGLV7-46	A0A075B6I9	117 aa		5.31	□□□□□ -1.56
ARHGEF9-238	ENST00000639092	MIR22HG	Q0VDD5	57 aa		5.3	□□□□□ -1.56
ARHGEF9-238	ENST00000639092	SPRR1B	P22528	89 aa		5.3	□□□□□ -1.56
ARHGEF9-238	ENST00000639092	KRTAP26-1	Q6PEX3	210 aa		5.3	□□□□□ -1.56
ARHGEF9-238	ENST00000639092	OCR1	Q9BZK8	76 aa		5.29	□□□□□ -1.56
ARHGEF9-238	ENST00000639092		Q6ZSA8	131 aa		5.29	□□□□□ -1.56
ARHGEF9-238	ENST00000639092	TRIO	O75962	3097 aa		5.29	□□□□□ -1.56
ARHGEF9-238	ENST00000639092	FLNC	Q14315	2725 aa		5.28	□□□□□ -1.56
ARHGEF9-238	ENST00000639092	ITPR2	Q14571	2701 aa		5.28	□□□□□ -1.56
ARHGEF9-238	ENST00000639092		Q8N1X5	172 aa		5.27	□□□□□ -1.57
ARHGEF9-238	ENST00000639092	NBEAL2	Q6ZNJ1	2754 aa		5.27	□□□□□ -1.57
ARHGEF9-238	ENST00000639092	KRTAP1-5	Q9BYS1	174 aa		5.27	□□□□□ -1.57
ARHGEF9-238	ENST00000639092	DMBT1	Q9UGM3	2413 aa	Predicted RBP	5.26	□□□□□ -1.57
ARHGEF9-238	ENST00000639092	KMT2B	Q9UMN6	2715 aa	Predicted RBP	5.26	□□□□□ -1.57
ARHGEF9-238	ENST00000639092	ITPR1	Q14643	2758 aa		5.25	□□□□□ -1.57
ARHGEF9-238	ENST00000639092	LCE6A	A0A183	80 aa		5.25	□□□□□ -1.57
ARHGEF9-238	ENST00000639092		Q8NDZ9	215 aa		5.25	□□□□□ -1.57
ARHGEF9-238	ENST00000639092	CRIPT	Q9P021	101 aa		5.25	□□□□□ -1.57
ARHGEF9-238	ENST00000639092	SPEG	Q15772	3267 aa		5.25	□□□□□ -1.57
ARHGEF9-238	ENST00000639092	MMP24-AS1	A0A0U1RRL7	71 aa		5.23	□□□□□ -1.57
ARHGEF9-238	ENST00000639092	ZCCHC13	Q8WW36	166 aa	Known RBP	5.21	□□□□□ -1.58
ARHGEF9-238	ENST00000639092	SPINT4	Q6UDR6	99 aa		5.2	□□□□□ -1.58
ARHGEF9-238	ENST00000639092	HRES1	P13985	223 aa		5.2	□□□□□ -1.58
ARHGEF9-238	ENST00000639092	LINC00472	Q9H8W2	130 aa		5.2	□□□□□ -1.58
ARHGEF9-238	ENST00000639092	TNRC18	O15417	2968 aa	Predicted RBP	5.2	□□□□□ -1.58
ARHGEF9-238	ENST00000639092	FRY	Q5TBA9	3013 aa		5.19	□□□□□ -1.58
ARHGEF9-238	ENST00000639092	LINC01554	Q52M75	96 aa		5.19	□□□□□ -1.58
ARHGEF9-238	ENST00000639092		Q6ZR54	194 aa		5.19	□□□□□ -1.58
ARHGEF9-238	ENST00000639092	ASPM	Q8IZT6	3477 aa		5.18	□□□□□ -1.58
ARHGEF9-238	ENST00000639092	VPS13A	Q96RL7	3174 aa		5.18	□□□□□ -1.58
ARHGEF9-238	ENST00000639092	CDC42SE1	Q9NRR8	79 aa		5.18	□□□□□ -1.58
ARHGEF9-238	ENST00000639092	KRTAP10-1	P60331	282 aa		5.17	□□□□□ -1.58
ARHGEF9-238	ENST00000639092	ZFHX4	Q86UP3	3567 aa		5.17	□□□□□ -1.58
ARHGEF9-238	ENST00000639092	HIVEP1	P15822	2718 aa		5.17	□□□□□ -1.58
ARHGEF9-238	ENST00000639092		A0A0D9SG42	100 aa		5.16	□□□□□ -1.58
ARHGEF9-238	ENST00000639092		Q5VSD8	79 aa		5.16	□□□□□ -1.58
ARHGEF9-238	ENST00000639092	TACC2	O95359	2948 aa		5.15	□□□□□ -1.58
ARHGEF9-238	ENST00000639092	KRTAP10-2	P60368	255 aa		5.15	□□□□□ -1.58
ARHGEF9-238	ENST00000639092	SEC61B	P60468	96 aa	Known RBP	5.15	□□□□□ -1.59
ARHGEF9-238	ENST00000639092	CSAG1	Q6PB30	78 aa		5.15	□□□□□ -1.59
ARHGEF9-238	ENST00000639092		Q1T7F1	81 aa		5.14	□□□□□ -1.59
ARHGEF9-238	ENST00000639092	NIPBL	Q6KC79	2804 aa	eCLIP	5.13	□□□□□ -1.59
ARHGEF9-238	ENST00000639092	LINC00483	Q53H64	154 aa		5.13	□□□□□ -1.59
ARHGEF9-238	ENST00000639092		Q8N9P0	234 aa	Predicted RBP	5.13	□□□□□ -1.59
ARHGEF9-238	ENST00000639092	TENM4	Q6N022	2769 aa		5.13	□□□□□ -1.59
ARHGEF9-238	ENST00000639092		A0A1B0GU33	70 aa		5.13	□□□□□ -1.59
ARHGEF9-238	ENST00000639092		Q5W150	140 aa		5.12	□□□□□ -1.59
ARHGEF9-238	ENST00000639092	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	5.12	□□□□□ -1.59
ARHGEF9-238	ENST00000639092		M0R2T5	61 aa		5.12	□□□□□ -1.59
ARHGEF9-238	ENST00000639092	CYSTM1	Q9H1C7	97 aa		5.12	□□□□□ -1.59
ARHGEF9-238	ENST00000639092	SPINK7	P58062	85 aa		5.12	□□□□□ -1.59
ARHGEF9-238	ENST00000639092	FREM2	Q5SZK8	3169 aa		5.11	□□□□□ -1.59
ARHGEF9-238	ENST00000639092	FP248	Q71RG6	208 aa	Predicted RBP	5.11	□□□□□ -1.59
ARHGEF9-238	ENST00000639092	CAMK2N1	Q7Z7J9	78 aa		5.1	□□□□□ -1.59
ARHGEF9-238	ENST00000639092	KTN1-AS1	Q86SY8	53 aa		5.1	□□□□□ -1.59
ARHGEF9-238	ENST00000639092	FRYL	O94915	3013 aa		5.1	□□□□□ -1.59
ARHGEF9-238	ENST00000639092	ATM	Q13315	3056 aa		5.1	□□□□□ -1.59
ARHGEF9-238	ENST00000639092	COL12A1	Q99715	3063 aa		5.1	□□□□□ -1.59
ARHGEF9-238	ENST00000639092		Q5XG85	94 aa		5.09	□□□□□ -1.59
ARHGEF9-238	ENST00000639092	UTP20	O75691	2785 aa	Known RBP	5.09	□□□□□ -1.59
ARHGEF9-238	ENST00000639092	LINC01558	Q9Y6Z2	57 aa		5.08	□□□□□ -1.6
ARHGEF9-238	ENST00000639092		Q6ZRN7	208 aa	Predicted RBP	5.08	□□□□□ -1.6
ARHGEF9-238	ENST00000639092	LCA10	Q71F78	164 aa		5.08	□□□□□ -1.6
ARHGEF9-238	ENST00000639092		S4R3F8	94 aa		5.08	□□□□□ -1.6
ARHGEF9-238	ENST00000639092	PANO1	I0J062	215 aa		5.07	□□□□□ -1.6
ARHGEF9-238	ENST00000639092		Q75L30	129 aa		5.07	□□□□□ -1.6
ARHGEF9-238	ENST00000639092	DMAC1	Q96GE9	116 aa		5.05	□□□□□ -1.6
ARHGEF9-238	ENST00000639092	LOC400499	M0QZD8	3231 aa		5.05	□□□□□ -1.6
ARHGEF9-238	ENST00000639092	APC	P25054	2843 aa		5.03	□□□□□ -1.6
ARHGEF9-238	ENST00000639092	RPS29	P62273	56 aa	Known RBP	5.03	□□□□□ -1.6
ARHGEF9-238	ENST00000639092	DMXL2	Q8TDJ6	3036 aa		5.03	□□□□□ -1.6
ARHGEF9-238	ENST00000639092	OXT	P01178	125 aa		5.03	□□□□□ -1.6
ARHGEF9-238	ENST00000639092	ASB16-AS1	Q495Z4	193 aa		5.03	□□□□□ -1.6
ARHGEF9-238	ENST00000639092		R4GN34	69 aa		5.01	□□□□□ -1.61
ARHGEF9-238	ENST00000639092		A0A087X002	238 aa		5.01	□□□□□ -1.61
ARHGEF9-238	ENST00000639092	KALRN	O60229	2985 aa		5	□□□□□ -1.61
ARHGEF9-238	ENST00000639092	NBEA	Q8NFP9	2946 aa		5	□□□□□ -1.61
ARHGEF9-238	ENST00000639092	ZZEF1	O43149	2961 aa		4.99	□□□□□ -1.61

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