RNA–Protein interactions for RNA: ENST00000637736.1

CACNA1A-246, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 8,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-246ENST00000637736 KMT2BQ9UMN6 2715 aaPredicted RBP11.9□□□□□ -0.5
CACNA1A-246ENST00000637736 DMBT1Q9UGM3 2413 aaPredicted RBP11.85□□□□□ -0.51
CACNA1A-246ENST00000637736 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.84□□□□□ -0.51
CACNA1A-246ENST00000637736 PCNTO95613 3336 aa11.84□□□□□ -0.51
CACNA1A-246ENST00000637736 SEC61BP60468 96 aaKnown RBP11.83□□□□□ -0.51
CACNA1A-246ENST00000637736 PRAC1Q96KF2 57 aa11.83□□□□□ -0.51
CACNA1A-246ENST00000637736 UNC79Q9P2D8 2635 aa11.78□□□□□ -0.52
CACNA1A-246ENST00000637736 CFAP54Q96N23 3096 aa11.78□□□□□ -0.52
CACNA1A-246ENST00000637736 Q8N9P0 234 aaPredicted RBP11.77□□□□□ -0.53
CACNA1A-246ENST00000637736 ROMO1P60602 79 aa11.75□□□□□ -0.53
CACNA1A-246ENST00000637736 M0QZ58 72 aa11.75□□□□□ -0.53
CACNA1A-246ENST00000637736 LINC01558Q9Y6Z2 57 aa11.74□□□□□ -0.53
CACNA1A-246ENST00000637736 PLAC8Q9NZF1 115 aa11.73□□□□□ -0.53
CACNA1A-246ENST00000637736 COL6A5A8TX70 2615 aa11.72□□□□□ -0.53
CACNA1A-246ENST00000637736 KRTAP1-3Q8IUG1 177 aa11.71□□□□□ -0.53
CACNA1A-246ENST00000637736 RPL37P61927 97 aaKnown RBP11.69□□□□□ -0.54
CACNA1A-246ENST00000637736 Q5W150 140 aa11.68□□□□□ -0.54
CACNA1A-246ENST00000637736 Q5VSD8 79 aa11.66□□□□□ -0.54
CACNA1A-246ENST00000637736 GCN1Q92616 2671 aaKnown RBP11.65□□□□□ -0.54
CACNA1A-246ENST00000637736 MMP24-AS1A0A0U1RRL7 71 aa11.65□□□□□ -0.55
CACNA1A-246ENST00000637736 KRTAP1-1Q07627 177 aa11.61□□□□□ -0.55
CACNA1A-246ENST00000637736 NOTCH1P46531 2555 aa11.59□□□□□ -0.55
CACNA1A-246ENST00000637736 ADM2Q7Z4H4 148 aa11.58□□□□□ -0.56
CACNA1A-246ENST00000637736 ITPR2Q14571 2701 aa11.57□□□□□ -0.56
CACNA1A-246ENST00000637736 Q5VV11 94 aa11.55□□□□□ -0.56
CACNA1A-246ENST00000637736 LAMA2P24043 3122 aaKnown RBP11.55□□□□□ -0.56
CACNA1A-246ENST00000637736 SPRR1AP35321 89 aa11.53□□□□□ -0.56
CACNA1A-246ENST00000637736 TEP1Q99973 2627 aaKnown RBP11.51□□□□□ -0.57
CACNA1A-246ENST00000637736 LINC00472Q9H8W2 130 aa11.5□□□□□ -0.57
CACNA1A-246ENST00000637736 A0A0C4DFX4 3053 aa11.5□□□□□ -0.57
CACNA1A-246ENST00000637736 FP248Q71RG6 208 aaPredicted RBP11.49□□□□□ -0.57
CACNA1A-246ENST00000637736 STAB2Q8WWQ8 2551 aa11.48□□□□□ -0.57
CACNA1A-246ENST00000637736 C20orf166-AS1Q96NR2 134 aa11.47□□□□□ -0.57
CACNA1A-246ENST00000637736 SPRR1BP22528 89 aa11.44□□□□□ -0.58
CACNA1A-246ENST00000637736 SPATA8Q6RVD6 105 aa11.43□□□□□ -0.58
CACNA1A-246ENST00000637736 KRTAP16-1A8MUX0 517 aa11.42□□□□□ -0.58
CACNA1A-246ENST00000637736 Q5XG85 94 aa11.4□□□□□ -0.58
CACNA1A-246ENST00000637736 OXTP01178 125 aa11.4□□□□□ -0.58
CACNA1A-246ENST00000637736 Q8NDZ9 215 aa11.37□□□□□ -0.59
CACNA1A-246ENST00000637736 SETXQ7Z333 2677 aaKnown RBP11.36□□□□□ -0.59
CACNA1A-246ENST00000637736 APCP25054 2843 aa11.35□□□□□ -0.59
CACNA1A-246ENST00000637736 MGAQ8IWI9 3026 aa11.34□□□□□ -0.59
CACNA1A-246ENST00000637736 MAP1AP78559 2803 aaPredicted RBP11.33□□□□□ -0.6
CACNA1A-246ENST00000637736 ZNF292O60281 2723 aa11.31□□□□□ -0.6
CACNA1A-246ENST00000637736 XIRP2A4UGR9 3374 aa11.3□□□□□ -0.6
CACNA1A-246ENST00000637736 ASB16-AS1Q495Z4 193 aa11.29□□□□□ -0.6
CACNA1A-246ENST00000637736 KRTAP26-1Q6PEX3 210 aa11.28□□□□□ -0.6
CACNA1A-246ENST00000637736 CHD7Q9P2D1 2997 aa11.25□□□□□ -0.61
CACNA1A-246ENST00000637736 LCE6AA0A183 80 aa11.25□□□□□ -0.61
CACNA1A-246ENST00000637736 Q6ZR54 194 aa11.25□□□□□ -0.61
CACNA1A-246ENST00000637736 CYSTM1Q9H1C7 97 aa11.25□□□□□ -0.61
CACNA1A-246ENST00000637736 MKI67P46013 3256 aaKnown RBP11.24□□□□□ -0.61
CACNA1A-246ENST00000637736 KRTAP10-1P60331 282 aa11.23□□□□□ -0.61
CACNA1A-246ENST00000637736 PANO1I0J062 215 aa11.22□□□□□ -0.61
CACNA1A-246ENST00000637736 BAHCC1Q9P281 2608 aa11.18□□□□□ -0.62
CACNA1A-246ENST00000637736 NBEAL2Q6ZNJ1 2754 aa11.18□□□□□ -0.62
CACNA1A-246ENST00000637736 KRTAP10-2P60368 255 aa11.17□□□□□ -0.62
CACNA1A-246ENST00000637736 TRIOO75962 3097 aa11.16□□□□□ -0.62
CACNA1A-246ENST00000637736 A8MUU9 505 aa11.16□□□□□ -0.62
CACNA1A-246ENST00000637736 VPS13AQ96RL7 3174 aa11.16□□□□□ -0.62
CACNA1A-246ENST00000637736 KRTAP1-5Q9BYS1 174 aa11.15□□□□□ -0.62
CACNA1A-246ENST00000637736 TRANK1O15050 2925 aa11.1□□□□□ -0.63
CACNA1A-246ENST00000637736 FRYQ5TBA9 3013 aa11.1□□□□□ -0.63
CACNA1A-246ENST00000637736 WDFY4Q6ZS81 3184 aa11.07□□□□□ -0.64
CACNA1A-246ENST00000637736 NSD1Q96L73 2696 aaPredicted RBP11.06□□□□□ -0.64
CACNA1A-246ENST00000637736 CELSR3Q9NYQ7 3312 aa11.04□□□□□ -0.64
CACNA1A-246ENST00000637736 PRUNE2Q8WUY3 3088 aa11.03□□□□□ -0.64
CACNA1A-246ENST00000637736 RPS29P62273 56 aaKnown RBP11.03□□□□□ -0.64
CACNA1A-246ENST00000637736 KRTAP25-1Q3LHN0 102 aa11.02□□□□□ -0.65
CACNA1A-246ENST00000637736 IGSF10Q6WRI0 2623 aa11.01□□□□□ -0.65
CACNA1A-246ENST00000637736 C10orf95Q9H7T3 257 aa11.01□□□□□ -0.65
CACNA1A-246ENST00000637736 REV3LO60673 3130 aa11□□□□□ -0.65
CACNA1A-246ENST00000637736 NDUFAF8A1L188 74 aa10.98□□□□□ -0.65
CACNA1A-246ENST00000637736 A8MU10 97 aa10.98□□□□□ -0.65
CACNA1A-246ENST00000637736 A0A087X002 238 aa10.98□□□□□ -0.65
CACNA1A-246ENST00000637736 TNP1P09430 55 aa10.97□□□□□ -0.65
CACNA1A-246ENST00000637736 KRTAP4-16G5E9R7 235 aaPredicted RBP10.96□□□□□ -0.66
CACNA1A-246ENST00000637736 UTP20O75691 2785 aaKnown RBP10.95□□□□□ -0.66
CACNA1A-246ENST00000637736 FREM2Q5SZK8 3169 aa10.95□□□□□ -0.66
CACNA1A-246ENST00000637736 DSPP15924 2871 aaKnown RBP10.94□□□□□ -0.66
CACNA1A-246ENST00000637736 KALRNO60229 2985 aa10.92□□□□□ -0.66
CACNA1A-246ENST00000637736 KRTAP29-1A8MX34 341 aaPredicted RBP10.9□□□□□ -0.66
CACNA1A-246ENST00000637736 RANBP2P49792 3224 aaKnown RBP10.87□□□□□ -0.67
CACNA1A-246ENST00000637736 LAMA3Q16787 3333 aa10.86□□□□□ -0.67
CACNA1A-246ENST00000637736 FRYLO94915 3013 aa10.85□□□□□ -0.67
CACNA1A-246ENST00000637736 CRYBG3Q68DQ2 2970 aa10.85□□□□□ -0.67
CACNA1A-246ENST00000637736 UBR5O95071 2799 aaPredicted RBP10.84□□□□□ -0.67
CACNA1A-246ENST00000637736 LRBAP50851 2863 aa10.83□□□□□ -0.68
CACNA1A-246ENST00000637736 ITPR1Q14643 2758 aa10.83□□□□□ -0.68
CACNA1A-246ENST00000637736 NOTCH2NLQ7Z3S9 236 aa10.8□□□□□ -0.68
CACNA1A-246ENST00000637736 DNAH14Q0VDD8 3507 aa10.75□□□□□ -0.69
CACNA1A-246ENST00000637736 UNC80Q8N2C7 3258 aa10.75□□□□□ -0.69
CACNA1A-246ENST00000637736 BRCA2P51587 3418 aa10.72□□□□□ -0.69
CACNA1A-246ENST00000637736 CHD9Q3L8U1 2897 aa10.71□□□□□ -0.69
CACNA1A-246ENST00000637736 KRTAP10-8P60410 259 aa10.68□□□□□ -0.7
CACNA1A-246ENST00000637736 ASH1LQ9NR48 2969 aaKnown RBP10.68□□□□□ -0.7
CACNA1A-246ENST00000637736 USP34Q70CQ2 3546 aa10.67□□□□□ -0.7
CACNA1A-246ENST00000637736 A6NN06 94 aa10.66□□□□□ -0.7
CACNA1A-246ENST00000637736 DMXL2Q8TDJ6 3036 aa10.62□□□□□ -0.71
CACNA1A-246ENST00000637736 CDH23Q9H251 3354 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms