RNA–Protein interactions for RNA: ENST00000637490.1

SYNGAP1-221, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 132 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-221ENST00000637490 CELSR2Q9HCU4 2923 aa1.19□□□□□ -2.22
SYNGAP1-221ENST00000637490 WDFY4Q6ZS81 3184 aa1.18□□□□□ -2.22
SYNGAP1-221ENST00000637490 MKI67P46013 3256 aaKnown RBP1.18□□□□□ -2.22
SYNGAP1-221ENST00000637490 RANBP2P49792 3224 aaKnown RBP1.18□□□□□ -2.22
SYNGAP1-221ENST00000637490 FAM208BQ5VWN6 2430 aa1.18□□□□□ -2.22
SYNGAP1-221ENST00000637490 FRYLO94915 3013 aa1.18□□□□□ -2.22
SYNGAP1-221ENST00000637490 OTOGLQ3ZCN5 2332 aa1.17□□□□□ -2.22
SYNGAP1-221ENST00000637490 EP300Q09472 2414 aaPredicted RBP1.17□□□□□ -2.22
SYNGAP1-221ENST00000637490 CACNA1HO95180 2353 aa1.17□□□□□ -2.22
SYNGAP1-221ENST00000637490 LCE2AQ5TA79 106 aaPredicted RBP1.17□□□□□ -2.22
SYNGAP1-221ENST00000637490 UTRNP46939 3433 aa1.16□□□□□ -2.22
SYNGAP1-221ENST00000637490 DEFB135Q30KP9 77 aa1.16□□□□□ -2.22
SYNGAP1-221ENST00000637490 CSPG4Q6UVK1 2322 aa1.16□□□□□ -2.22
SYNGAP1-221ENST00000637490 BOD1L1Q8NFC6 3051 aa1.16□□□□□ -2.22
SYNGAP1-221ENST00000637490 DEFB4AO15263 64 aa1.15□□□□□ -2.23
SYNGAP1-221ENST00000637490 C2CD3Q4AC94 2353 aa1.15□□□□□ -2.23
SYNGAP1-221ENST00000637490 SZT2Q5T011 3432 aa1.15□□□□□ -2.23
SYNGAP1-221ENST00000637490 ROS1P08922 2347 aa1.15□□□□□ -2.23
SYNGAP1-221ENST00000637490 UNC80Q8N2C7 3258 aa1.14□□□□□ -2.23
SYNGAP1-221ENST00000637490 KALRNO60229 2985 aa1.14□□□□□ -2.23
SYNGAP1-221ENST00000637490 ZNF462Q96JM2 2506 aa1.14□□□□□ -2.23
SYNGAP1-221ENST00000637490 NCOR1O75376 2440 aa1.14□□□□□ -2.23
SYNGAP1-221ENST00000637490 DCHS1Q96JQ0 3298 aa1.14□□□□□ -2.23
SYNGAP1-221ENST00000637490 RPS29P62273 56 aaKnown RBP1.14□□□□□ -2.23
SYNGAP1-221ENST00000637490 LCE2CQ5TA81 110 aa1.14□□□□□ -2.23
SYNGAP1-221ENST00000637490 MAP1AP78559 2803 aaPredicted RBP1.14□□□□□ -2.23
SYNGAP1-221ENST00000637490 TRIOO75962 3097 aa1.14□□□□□ -2.23
SYNGAP1-221ENST00000637490 GVINP1Q7Z2Y8 2422 aa1.14□□□□□ -2.23
SYNGAP1-221ENST00000637490 DSPP15924 2871 aaKnown RBP1.14□□□□□ -2.23
SYNGAP1-221ENST00000637490 LCE2DQ5TA82 110 aaPredicted RBP1.13□□□□□ -2.23
SYNGAP1-221ENST00000637490 ITPR1Q14643 2758 aa1.13□□□□□ -2.23
SYNGAP1-221ENST00000637490 REV3LO60673 3130 aa1.12□□□□□ -2.23
SYNGAP1-221ENST00000637490 F8P00451 2351 aa1.12□□□□□ -2.23
SYNGAP1-221ENST00000637490 FBN1P35555 2871 aaKnown RBP1.12□□□□□ -2.23
SYNGAP1-221ENST00000637490 UBR5O95071 2799 aaPredicted RBP1.12□□□□□ -2.23
SYNGAP1-221ENST00000637490 KRTAP10-9P60411 292 aa1.12□□□□□ -2.23
SYNGAP1-221ENST00000637490 KRTAP10-11P60412 298 aa1.12□□□□□ -2.23
SYNGAP1-221ENST00000637490 AKAP13Q12802 2813 aa1.12□□□□□ -2.23
SYNGAP1-221ENST00000637490 RP1L1Q8IWN7 2480 aaPredicted RBP1.12□□□□□ -2.23
SYNGAP1-221ENST00000637490 DNAH12Q6ZR08 3092 aa1.12□□□□□ -2.23
SYNGAP1-221ENST00000637490 CELSR1Q9NYQ6 3014 aa1.11□□□□□ -2.23
SYNGAP1-221ENST00000637490 DMXL1Q9Y485 3027 aa1.11□□□□□ -2.23
SYNGAP1-221ENST00000637490 FRYQ5TBA9 3013 aa1.1□□□□□ -2.23
SYNGAP1-221ENST00000637490 PRRC2CQ9Y520 2896 aaKnown RBP1.1□□□□□ -2.23
SYNGAP1-221ENST00000637490 ABCA2Q9BZC7 2435 aa1.1□□□□□ -2.23
SYNGAP1-221ENST00000637490 COL12A1Q99715 3063 aa1.1□□□□□ -2.23
SYNGAP1-221ENST00000637490 COL6A5A8TX70 2615 aa1.1□□□□□ -2.23
SYNGAP1-221ENST00000637490 BAHCC1Q9P281 2608 aa1.1□□□□□ -2.23
SYNGAP1-221ENST00000637490 SPEGQ15772 3267 aa1.1□□□□□ -2.23
SYNGAP1-221ENST00000637490 HTTP42858 3142 aa1.1□□□□□ -2.23
SYNGAP1-221ENST00000637490 CRYBG3Q68DQ2 2970 aa1.1□□□□□ -2.23
SYNGAP1-221ENST00000637490 VWFP04275 2813 aa1.1□□□□□ -2.23
SYNGAP1-221ENST00000637490 NBASA2RRP1 2371 aa1.1□□□□□ -2.23
SYNGAP1-221ENST00000637490 LORP23490 312 aaPredicted RBP1.1□□□□□ -2.23
SYNGAP1-221ENST00000637490 LAMA2P24043 3122 aaKnown RBP1.1□□□□□ -2.23
SYNGAP1-221ENST00000637490 C5orf42Q9H799 3197 aa1.1□□□□□ -2.23
SYNGAP1-221ENST00000637490 NCOR2Q9Y618 2525 aa1.1□□□□□ -2.23
SYNGAP1-221ENST00000637490 TRANK1O15050 2925 aa1.09□□□□□ -2.23
SYNGAP1-221ENST00000637490 CCDC168Q8NDH2 2452 aa1.09□□□□□ -2.23
SYNGAP1-221ENST00000637490 TNP1P09430 55 aa1.09□□□□□ -2.23
SYNGAP1-221ENST00000637490 MUC6Q6W4X9 2439 aa1.09□□□□□ -2.24
SYNGAP1-221ENST00000637490 SPG11Q96JI7 2443 aa1.09□□□□□ -2.24
SYNGAP1-221ENST00000637490 LRBAP50851 2863 aa1.09□□□□□ -2.24
SYNGAP1-221ENST00000637490 JMJD1CQ15652 2540 aa1.09□□□□□ -2.24
SYNGAP1-221ENST00000637490 ANKHD1Q8IWZ3 2542 aaKnown RBP1.09□□□□□ -2.24
SYNGAP1-221ENST00000637490 CHD9Q3L8U1 2897 aa1.08□□□□□ -2.24
SYNGAP1-221ENST00000637490 KRTAP10-10P60014 251 aa1.08□□□□□ -2.24
SYNGAP1-221ENST00000637490 KRTAP1-4P0C5Y4 121 aa1.07□□□□□ -2.24
SYNGAP1-221ENST00000637490 KRTAP2-2Q9BYT5 123 aa1.07□□□□□ -2.24
SYNGAP1-221ENST00000637490 EP400Q96L91 3159 aa1.07□□□□□ -2.24
SYNGAP1-221ENST00000637490 HIVEP3Q5T1R4 2406 aa1.07□□□□□ -2.24
SYNGAP1-221ENST00000637490 NAV2Q8IVL1 2488 aa1.07□□□□□ -2.24
SYNGAP1-221ENST00000637490 DMXL2Q8TDJ6 3036 aa1.07□□□□□ -2.24
SYNGAP1-221ENST00000637490 LAMA1P25391 3075 aa1.07□□□□□ -2.24
SYNGAP1-221ENST00000637490 CREBBPQ92793 2442 aa1.06□□□□□ -2.24
SYNGAP1-221ENST00000637490 ATRXP46100 2492 aa1.06□□□□□ -2.24
SYNGAP1-221ENST00000637490 MEGF8Q7Z7M0 2845 aa1.06□□□□□ -2.24
SYNGAP1-221ENST00000637490 KRTAP1-5Q9BYS1 174 aa1.06□□□□□ -2.24
SYNGAP1-221ENST00000637490 SRRM2Q9UQ35 2752 aaKnown RBP1.06□□□□□ -2.24
SYNGAP1-221ENST00000637490 PTPN13Q12923 2485 aa1.06□□□□□ -2.24
SYNGAP1-221ENST00000637490 XIRP2A4UGR9 3374 aa1.05□□□□□ -2.24
SYNGAP1-221ENST00000637490 ATMQ13315 3056 aa1.05□□□□□ -2.24
SYNGAP1-221ENST00000637490 FREM2Q5SZK8 3169 aa1.05□□□□□ -2.24
SYNGAP1-221ENST00000637490 C9orf92A6NGG3 77 aa1.05□□□□□ -2.24
SYNGAP1-221ENST00000637490 LCE2BO14633 110 aa1.05□□□□□ -2.24
SYNGAP1-221ENST00000637490 KRTAP10-1P60331 282 aa1.05□□□□□ -2.24
SYNGAP1-221ENST00000637490 SPTBN5Q9NRC6 3674 aaKnown RBP1.05□□□□□ -2.24
SYNGAP1-221ENST00000637490 NF1P21359 2839 aa1.05□□□□□ -2.24
SYNGAP1-221ENST00000637490 KRTAP19-4Q3LI73 84 aa1.04□□□□□ -2.24
SYNGAP1-221ENST00000637490 DMDP11532 3685 aa1.04□□□□□ -2.24
SYNGAP1-221ENST00000637490 CEP290O15078 2479 aa1.04□□□□□ -2.24
SYNGAP1-221ENST00000637490 CELSR3Q9NYQ7 3312 aa1.03□□□□□ -2.24
SYNGAP1-221ENST00000637490 RIF1Q5UIP0 2472 aaKnown RBP1.03□□□□□ -2.24
SYNGAP1-221ENST00000637490 SMR3AQ99954 134 aa1.03□□□□□ -2.24
SYNGAP1-221ENST00000637490 SONP18583 2426 aaKnown RBP1.03□□□□□ -2.25
SYNGAP1-221ENST00000637490 PKD1L2Q7Z442 2459 aa1.03□□□□□ -2.25
SYNGAP1-221ENST00000637490 LOC400499M0QZD8 3231 aa1.02□□□□□ -2.25
SYNGAP1-221ENST00000637490 TACC2O95359 2948 aa1.02□□□□□ -2.25
SYNGAP1-221ENST00000637490 KRTAP10-3P60369 221 aa1.02□□□□□ -2.25
SYNGAP1-221ENST00000637490 AKAP9Q99996 3911 aa1.02□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms