RNA–Protein interactions for RNA: ENST00000637475.1

CACNA1A-241, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

Gene CACNA1A, Length 1,975 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-241ENST00000637475 DEFB131BA0A096LNP1 70 aa12.46□□□□□ -0.41
CACNA1A-241ENST00000637475 C1orf195Q5TG92 126 aa12.46□□□□□ -0.41
CACNA1A-241ENST00000637475 SEC61GP60059 68 aa12.45□□□□□ -0.42
CACNA1A-241ENST00000637475 PSCAO43653 123 aa12.45□□□□□ -0.42
CACNA1A-241ENST00000637475 REG3GQ6UW15 175 aa12.44□□□□□ -0.42
CACNA1A-241ENST00000637475 COL7A1Q02388 2944 aa12.44□□□□□ -0.42
CACNA1A-241ENST00000637475 DNAH9Q9NYC9 4486 aa12.43□□□□□ -0.42
CACNA1A-241ENST00000637475 UBE2BP63146 152 aa12.43□□□□□ -0.42
CACNA1A-241ENST00000637475 H3BPC8 53 aa12.42□□□□□ -0.42
CACNA1A-241ENST00000637475 IGFL1Q6UW32 110 aa12.41□□□□□ -0.42
CACNA1A-241ENST00000637475 V9GYY9 64 aa12.4□□□□□ -0.42
CACNA1A-241ENST00000637475 KRTAP29-1A8MX34 341 aaPredicted RBP12.39□□□□□ -0.43
CACNA1A-241ENST00000637475 SPANXA2-OT1Q8N9U9 137 aa12.39□□□□□ -0.43
CACNA1A-241ENST00000637475 C11orf45Q8TAV5 145 aa12.39□□□□□ -0.43
CACNA1A-241ENST00000637475 LINC00588Q9Y4M8 146 aa12.39□□□□□ -0.43
CACNA1A-241ENST00000637475 TRAV22A0A0B4J277 110 aa12.39□□□□□ -0.43
CACNA1A-241ENST00000637475 MP68P56378 58 aa12.38□□□□□ -0.43
CACNA1A-241ENST00000637475 CASC10Q5T4H9 136 aa12.35□□□□□ -0.43
CACNA1A-241ENST00000637475 B9D2Q9BPU9 175 aa12.35□□□□□ -0.43
CACNA1A-241ENST00000637475 SPRR1BP22528 89 aa12.32□□□□□ -0.44
CACNA1A-241ENST00000637475 A0A087WSZ3 146 aa12.29□□□□□ -0.44
CACNA1A-241ENST00000637475 DNAH1Q9P2D7 4330 aa12.28□□□□□ -0.44
CACNA1A-241ENST00000637475 LRCOL1A6NCL2 159 aa12.27□□□□□ -0.44
CACNA1A-241ENST00000637475 H0Y9J4 135 aa12.27□□□□□ -0.45
CACNA1A-241ENST00000637475 C16orf90A8MZG2 172 aa12.26□□□□□ -0.45
CACNA1A-241ENST00000637475 WFDC13Q8IUB5 93 aa12.26□□□□□ -0.45
CACNA1A-241ENST00000637475 TENM3Q9P273 2699 aa12.25□□□□□ -0.45
CACNA1A-241ENST00000637475 CNBPP62633 177 aaKnown RBP12.25□□□□□ -0.45
CACNA1A-241ENST00000637475 LINC00208Q96KT6 92 aa12.25□□□□□ -0.45
CACNA1A-241ENST00000637475 WWC2-AS2Q96NR7 200 aa12.25□□□□□ -0.45
CACNA1A-241ENST00000637475 KMT2CQ8NEZ4 4911 aaKnown RBP12.25□□□□□ -0.45
CACNA1A-241ENST00000637475 A8MWP4 228 aa12.23□□□□□ -0.45
CACNA1A-241ENST00000637475 CASC2Q6XLA1 102 aa12.23□□□□□ -0.45
CACNA1A-241ENST00000637475 H0Y9P7 68 aa12.23□□□□□ -0.45
CACNA1A-241ENST00000637475 LINC00472Q9H8W2 130 aa12.23□□□□□ -0.45
CACNA1A-241ENST00000637475 HUWE1Q7Z6Z7 4374 aaKnown RBP12.23□□□□□ -0.45
CACNA1A-241ENST00000637475 C9orf163Q8N9P6 203 aa12.22□□□□□ -0.45
CACNA1A-241ENST00000637475 A0A0G2JQZ4 141 aa12.21□□□□□ -0.46
CACNA1A-241ENST00000637475 A0A1W2PNN7 141 aa12.21□□□□□ -0.46
CACNA1A-241ENST00000637475 PSPHP1O15172 72 aa12.2□□□□□ -0.46
CACNA1A-241ENST00000637475 LIMD2Q9BT23 127 aa12.2□□□□□ -0.46
CACNA1A-241ENST00000637475 UBE2AP49459 152 aa12.19□□□□□ -0.46
CACNA1A-241ENST00000637475 PRLHP81277 87 aa12.19□□□□□ -0.46
CACNA1A-241ENST00000637475 PRR4Q16378 134 aa12.19□□□□□ -0.46
CACNA1A-241ENST00000637475 A0A096LNI7 61 aa12.19□□□□□ -0.46
CACNA1A-241ENST00000637475 DEFB116Q30KQ4 102 aa12.19□□□□□ -0.46
CACNA1A-241ENST00000637475 Q5VV11 94 aa12.18□□□□□ -0.46
CACNA1A-241ENST00000637475 STAB2Q8WWQ8 2551 aa12.17□□□□□ -0.46
CACNA1A-241ENST00000637475 A8MUN3 132 aa12.17□□□□□ -0.46
CACNA1A-241ENST00000637475 PMAIP1Q13794 54 aa12.17□□□□□ -0.46
CACNA1A-241ENST00000637475 Q8N9P0 234 aaPredicted RBP12.16□□□□□ -0.46
CACNA1A-241ENST00000637475 RPL37AP61513 92 aaKnown RBP12.16□□□□□ -0.46
CACNA1A-241ENST00000637475 RYR3Q15413 4870 aa12.13□□□□□ -0.47
CACNA1A-241ENST00000637475 ASB16-AS1Q495Z4 193 aa12.11□□□□□ -0.47
CACNA1A-241ENST00000637475 MMP24-AS1A0A0U1RRL7 71 aa12.1□□□□□ -0.47
CACNA1A-241ENST00000637475 IGLV7-46A0A075B6I9 117 aa12.1□□□□□ -0.47
CACNA1A-241ENST00000637475 LOC101927531A0A1B0GV80 90 aa12.09□□□□□ -0.47
CACNA1A-241ENST00000637475 C14orf177Q52M58 125 aa12.07□□□□□ -0.48
CACNA1A-241ENST00000637475 DNAH7Q8WXX0 4024 aa12.06□□□□□ -0.48
CACNA1A-241ENST00000637475 Q75L30 129 aa12.06□□□□□ -0.48
CACNA1A-241ENST00000637475 IGKV2-24A0A0C4DH68 120 aa12.05□□□□□ -0.48
CACNA1A-241ENST00000637475 TP53AIP1Q9HCN2 124 aa12.05□□□□□ -0.48
CACNA1A-241ENST00000637475 KRTAP11-1Q8IUC1 163 aa12.03□□□□□ -0.48
CACNA1A-241ENST00000637475 MOBPQ13875 183 aa12.02□□□□□ -0.49
CACNA1A-241ENST00000637475 KRTAP13-1Q8IUC0 172 aa12.02□□□□□ -0.49
CACNA1A-241ENST00000637475 PHF5AQ7RTV0 110 aaKnown RBP12.01□□□□□ -0.49
CACNA1A-241ENST00000637475 COA5Q86WW8 74 aa12.01□□□□□ -0.49
CACNA1A-241ENST00000637475 KRTAP1-5Q9BYS1 174 aa12.01□□□□□ -0.49
CACNA1A-241ENST00000637475 DYNC2H1Q8NCM8 4307 aaKnown RBP12□□□□□ -0.49
CACNA1A-241ENST00000637475 Q6ZR54 194 aa12□□□□□ -0.49
CACNA1A-241ENST00000637475 CHKB-CPT1BH3BT56 60 aa11.98□□□□□ -0.49
CACNA1A-241ENST00000637475 PRR15LQ9BU68 103 aa11.98□□□□□ -0.49
CACNA1A-241ENST00000637475 Q96NJ1 140 aa11.98□□□□□ -0.49
CACNA1A-241ENST00000637475 CSMD3Q7Z407 3707 aa11.97□□□□□ -0.49
CACNA1A-241ENST00000637475 TENM2Q9NT68 2774 aa11.97□□□□□ -0.49
CACNA1A-241ENST00000637475 PLAC8Q9NZF1 115 aa11.96□□□□□ -0.49
CACNA1A-241ENST00000637475 SACSQ9NZJ4 4579 aa11.96□□□□□ -0.5
CACNA1A-241ENST00000637475 STARD9Q9P2P6 4700 aa11.94□□□□□ -0.5
CACNA1A-241ENST00000637475 ATP11AUNQ6ZP68 121 aa11.94□□□□□ -0.5
CACNA1A-241ENST00000637475 LINC01558Q9Y6Z2 57 aa11.92□□□□□ -0.5
CACNA1A-241ENST00000637475 CHTF8P0CG12 524 aa11.91□□□□□ -0.5
CACNA1A-241ENST00000637475 A8MU10 97 aa11.9□□□□□ -0.5
CACNA1A-241ENST00000637475 LINC00483Q53H64 154 aa11.9□□□□□ -0.5
CACNA1A-241ENST00000637475 RYR2Q92736 4967 aa11.9□□□□□ -0.5
CACNA1A-241ENST00000637475 CD164Q04900 197 aa11.9□□□□□ -0.5
CACNA1A-241ENST00000637475 C8orf17Q9NRJ1 99 aa11.9□□□□□ -0.5
CACNA1A-241ENST00000637475 LYSTQ99698 3801 aa11.88□□□□□ -0.51
CACNA1A-241ENST00000637475 LCA10Q71F78 164 aa11.88□□□□□ -0.51
CACNA1A-241ENST00000637475 CDC42SE1Q9NRR8 79 aa11.87□□□□□ -0.51
CACNA1A-241ENST00000637475 KTN1-AS1Q86SY8 53 aa11.86□□□□□ -0.51
CACNA1A-241ENST00000637475 A0A1B0GVX0 72 aa11.83□□□□□ -0.52
CACNA1A-241ENST00000637475 A6NED7 52 aa11.81□□□□□ -0.52
CACNA1A-241ENST00000637475 APLNQ9ULZ1 77 aa11.81□□□□□ -0.52
CACNA1A-241ENST00000637475 A6NN06 94 aa11.8□□□□□ -0.52
CACNA1A-241ENST00000637475 PCOTHQ58A44 107 aa11.79□□□□□ -0.52
CACNA1A-241ENST00000637475 NDUFS5O43920 106 aa11.79□□□□□ -0.52
CACNA1A-241ENST00000637475 MRPL34Q9BQ48 92 aaKnown RBP11.79□□□□□ -0.52
CACNA1A-241ENST00000637475 ZNF706Q9Y5V0 76 aaPredicted RBP11.78□□□□□ -0.52
CACNA1A-241ENST00000637475 HYDINQ4G0P3 5121 aa11.77□□□□□ -0.53
CACNA1A-241ENST00000637475 UBE2DNLQ8IWF7 75 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms