RNA–Protein interactions for RNA: ENST00000637285.1

SCN1A-215, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 100 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-215ENST00000637285 ABCC2Q92887 1545 aa-3.91□□□□□ -3.04
SCN1A-215ENST00000637285 FOCADQ5VW36 1801 aa-3.92□□□□□ -3.04
SCN1A-215ENST00000637285 hADV29S1A0JD25 119 aa-3.92□□□□□ -3.04
SCN1A-215ENST00000637285 LEPROTL1O95214 131 aa-3.92□□□□□ -3.04
SCN1A-215ENST00000637285 UQCRHP07919 91 aa-3.92□□□□□ -3.04
SCN1A-215ENST00000637285 ALKAL2Q6UX46 152 aa-3.92□□□□□ -3.04
SCN1A-215ENST00000637285 TOGARAM1Q9Y4F4 1720 aa-3.92□□□□□ -3.04
SCN1A-215ENST00000637285 ARHGAP5Q13017 1502 aa-3.93□□□□□ -3.04
SCN1A-215ENST00000637285 AKAIN1P0CW23 69 aa-3.93□□□□□ -3.04
SCN1A-215ENST00000637285 NESP48681 1621 aa-3.93□□□□□ -3.04
SCN1A-215ENST00000637285 CRYBG1Q9Y4K1 1723 aa-3.93□□□□□ -3.04
SCN1A-215ENST00000637285 PYDC1Q8WXC3 89 aa-3.94□□□□□ -3.04
SCN1A-215ENST00000637285 TEX14Q8IWB6 1497 aa-3.94□□□□□ -3.04
SCN1A-215ENST00000637285 PAIP2BQ9ULR5 123 aaKnown RBP-3.95□□□□□ -3.04
SCN1A-215ENST00000637285 ANKRD36BQ8N2N9 1353 aa-3.95□□□□□ -3.04
SCN1A-215ENST00000637285 MLH3Q9UHC1 1453 aa-3.96□□□□□ -3.04
SCN1A-215ENST00000637285 IQCF6A8MYZ5 107 aa-3.96□□□□□ -3.04
SCN1A-215ENST00000637285 HMGN3Q15651 99 aa-3.96□□□□□ -3.04
SCN1A-215ENST00000637285 CHD1O14646 1710 aa-3.96□□□□□ -3.04
SCN1A-215ENST00000637285 H3BQ15 152 aa-3.97□□□□□ -3.04
SCN1A-215ENST00000637285 SVBPQ8N300 66 aa-3.97□□□□□ -3.04
SCN1A-215ENST00000637285 FREM2Q5SZK8 3169 aa-3.97□□□□□ -3.05
SCN1A-215ENST00000637285 RAPGEF2Q9Y4G8 1499 aa-3.98□□□□□ -3.05
SCN1A-215ENST00000637285 NDUFC1O43677 76 aa-3.98□□□□□ -3.05
SCN1A-215ENST00000637285 ETDBQ3ZM63 59 aa-3.98□□□□□ -3.05
SCN1A-215ENST00000637285 NWD1Q149M9 1564 aa-3.98□□□□□ -3.05
SCN1A-215ENST00000637285 MPC2O95563 127 aa-3.99□□□□□ -3.05
SCN1A-215ENST00000637285 NRXN1Q9ULB1 1477 aa-3.99□□□□□ -3.05
SCN1A-215ENST00000637285 LINC01546A6NGU7 62 aa-4□□□□□ -3.05
SCN1A-215ENST00000637285 SNAPC5O75971 98 aa-4□□□□□ -3.05
SCN1A-215ENST00000637285 PRUNE2Q8WUY3 3088 aa-4.01□□□□□ -3.05
SCN1A-215ENST00000637285 RGPD1P0DJD0 1748 aa-4.01□□□□□ -3.05
SCN1A-215ENST00000637285 PARP4Q9UKK3 1724 aaKnown RBP-4.01□□□□□ -3.05
SCN1A-215ENST00000637285 KRTAP19-6Q3LI70 58 aa-4.01□□□□□ -3.05
SCN1A-215ENST00000637285 CC2D2AQ9P2K1 1620 aa-4.02□□□□□ -3.05
SCN1A-215ENST00000637285 PRDM15P57071 1507 aaPredicted RBP-4.03□□□□□ -3.05
SCN1A-215ENST00000637285 LCE6AA0A183 80 aa-4.03□□□□□ -3.05
SCN1A-215ENST00000637285 A0A1B0GUT8 65 aa-4.03□□□□□ -3.05
SCN1A-215ENST00000637285 BAZ1AQ9NRL2 1556 aaPredicted RBP-4.04□□□□□ -3.06
SCN1A-215ENST00000637285 ZNF720Q7Z2F6 126 aa-4.04□□□□□ -3.06
SCN1A-215ENST00000637285 WT1-ASQ06250 92 aa-4.05□□□□□ -3.06
SCN1A-215ENST00000637285 LY75O60449 1722 aa-4.05□□□□□ -3.06
SCN1A-215ENST00000637285 SUPT6HQ7KZ85 1726 aaKnown RBP-4.05□□□□□ -3.06
SCN1A-215ENST00000637285 MYOM2P54296 1465 aa-4.05□□□□□ -3.06
SCN1A-215ENST00000637285 TRAV21A0A0B4J279 112 aa-4.07□□□□□ -3.06
SCN1A-215ENST00000637285 MYH4Q9Y623 1939 aa-4.07□□□□□ -3.06
SCN1A-215ENST00000637285 POLR1AO95602 1720 aaPredicted RBP-4.08□□□□□ -3.06
SCN1A-215ENST00000637285 SPHKAPQ2M3C7 1700 aa-4.08□□□□□ -3.06
SCN1A-215ENST00000637285 MAST1Q9Y2H9 1570 aa-4.08□□□□□ -3.06
SCN1A-215ENST00000637285 IER3IP1Q9Y5U9 82 aa-4.08□□□□□ -3.06
SCN1A-215ENST00000637285 EIF4G3O43432 1585 aaKnown RBP-4.1□□□□□ -3.07
SCN1A-215ENST00000637285 PLIN4Q96Q06 1357 aa-4.1□□□□□ -3.07
SCN1A-215ENST00000637285 GNGT2O14610 69 aa-4.1□□□□□ -3.07
SCN1A-215ENST00000637285 ACYP1P07311 99 aa-4.1□□□□□ -3.07
SCN1A-215ENST00000637285 ZFHX4Q86UP3 3567 aa-4.1□□□□□ -3.07
SCN1A-215ENST00000637285 PLGLAQ15195 96 aa-4.12□□□□□ -3.07
SCN1A-215ENST00000637285 NRKQ7Z2Y5 1582 aa-4.12□□□□□ -3.07
SCN1A-215ENST00000637285 DOT1LQ8TEK3 1739 aa-4.12□□□□□ -3.07
SCN1A-215ENST00000637285 CYB5AP00167 134 aa-4.13□□□□□ -3.07
SCN1A-215ENST00000637285 NOP10Q9NPE3 64 aaKnown RBP-4.13□□□□□ -3.07
SCN1A-215ENST00000637285 S100PP25815 95 aa-4.14□□□□□ -3.07
SCN1A-215ENST00000637285 CCDC58Q4VC31 144 aa-4.14□□□□□ -3.07
SCN1A-215ENST00000637285 CRYBG3Q68DQ2 2970 aa-4.14□□□□□ -3.07
SCN1A-215ENST00000637285 ABCA3Q99758 1704 aa-4.15□□□□□ -3.07
SCN1A-215ENST00000637285 ITSN2Q9NZM3 1697 aa-4.16□□□□□ -3.07
SCN1A-215ENST00000637285 LTN1O94822 1766 aa-4.16□□□□□ -3.08
SCN1A-215ENST00000637285 PPP3R1P63098 170 aa-4.17□□□□□ -3.08
SCN1A-215ENST00000637285 CFAP54Q96N23 3096 aa-4.18□□□□□ -3.08
SCN1A-215ENST00000637285 PMCHL2Q9BQD1 86 aa-4.18□□□□□ -3.08
SCN1A-215ENST00000637285 SMARCA2P51531 1590 aa-4.19□□□□□ -3.08
SCN1A-215ENST00000637285 UQCRHLA0A096LP55 91 aa-4.19□□□□□ -3.08
SCN1A-215ENST00000637285 GNG4P50150 75 aa-4.19□□□□□ -3.08
SCN1A-215ENST00000637285 DDX60LQ5H9U9 1706 aaKnown RBP-4.2□□□□□ -3.08
SCN1A-215ENST00000637285 ATOX1O00244 68 aa-4.2□□□□□ -3.08
SCN1A-215ENST00000637285 MT-ATP8P03928 68 aa-4.2□□□□□ -3.08
SCN1A-215ENST00000637285 KIF1AQ12756 1690 aa-4.21□□□□□ -3.08
SCN1A-215ENST00000637285 MT1FP04733 61 aa-4.21□□□□□ -3.08
SCN1A-215ENST00000637285 SPART-AS1P0CW21 52 aa-4.21□□□□□ -3.08
SCN1A-215ENST00000637285 RPS27P42677 84 aaKnown RBP-4.21□□□□□ -3.08
SCN1A-215ENST00000637285 BVES-AS1Q5T3Y7 98 aa-4.21□□□□□ -3.08
SCN1A-215ENST00000637285 RPS27LQ71UM5 84 aaKnown RBP-4.21□□□□□ -3.08
SCN1A-215ENST00000637285 KIAA0586Q9BVV6 1533 aa-4.21□□□□□ -3.08
SCN1A-215ENST00000637285 ROCK2O75116 1388 aaKnown RBP-4.22□□□□□ -3.08
SCN1A-215ENST00000637285 CCNB3Q8WWL7 1395 aa-4.22□□□□□ -3.08
SCN1A-215ENST00000637285 TMEM131LA2VDJ0 1609 aa-4.22□□□□□ -3.09
SCN1A-215ENST00000637285 PZPP20742 1482 aa-4.23□□□□□ -3.09
SCN1A-215ENST00000637285 H3BUA1 57 aa-4.23□□□□□ -3.09
SCN1A-215ENST00000637285 NDUFA2O43678 99 aa-4.23□□□□□ -3.09
SCN1A-215ENST00000637285 RPS29P62273 56 aaKnown RBP-4.23□□□□□ -3.09
SCN1A-215ENST00000637285 M0QZ58 72 aa-4.24□□□□□ -3.09
SCN1A-215ENST00000637285 COL5A1-AS1Q5SY13 56 aa-4.25□□□□□ -3.09
SCN1A-215ENST00000637285 MYO15AQ9UKN7 3530 aa-4.26□□□□□ -3.09
SCN1A-215ENST00000637285 A8MTW9 85 aa-4.26□□□□□ -3.09
SCN1A-215ENST00000637285 NDUFB1O75438 58 aa-4.26□□□□□ -3.09
SCN1A-215ENST00000637285 HMGN2P05204 90 aaKnown RBP-4.26□□□□□ -3.09
SCN1A-215ENST00000637285 ITSN1Q15811 1721 aa-4.26□□□□□ -3.09
SCN1A-215ENST00000637285 DIP2BQ9P265 1576 aa-4.27□□□□□ -3.09
SCN1A-215ENST00000637285 M0QY20 66 aa-4.27□□□□□ -3.09
SCN1A-215ENST00000637285 IFI27P40305 119 aaPredicted RBP-4.27□□□□□ -3.09
SCN1A-215ENST00000637285 RPL13AP3Q6NVV1 102 aa-4.27□□□□□ -3.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms