RNA–Protein interactions for RNA: ENST00000636769.1

SCN2A-213, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

TSL 5

Gene SCN2A, Length 8,573 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-213ENST00000636769 WWC2-AS2Q96NR7 200 aa3.72□□□□□ -1.81
SCN2A-213ENST00000636769 ANKRD17O75179 2603 aaKnown RBP3.72□□□□□ -1.81
SCN2A-213ENST00000636769 K7EIL1 84 aa3.71□□□□□ -1.82
SCN2A-213ENST00000636769 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.7□□□□□ -1.82
SCN2A-213ENST00000636769 PLAC8Q9NZF1 115 aa3.7□□□□□ -1.82
SCN2A-213ENST00000636769 KRTAP1-3Q8IUG1 177 aa3.69□□□□□ -1.82
SCN2A-213ENST00000636769 S4R3F8 94 aa3.69□□□□□ -1.82
SCN2A-213ENST00000636769 FLNBO75369 2602 aaKnown RBP3.69□□□□□ -1.82
SCN2A-213ENST00000636769 RANBP2P49792 3224 aaKnown RBP3.69□□□□□ -1.82
SCN2A-213ENST00000636769 KRTAP1-1Q07627 177 aa3.68□□□□□ -1.82
SCN2A-213ENST00000636769 HECTD1Q9ULT8 2610 aa3.68□□□□□ -1.82
SCN2A-213ENST00000636769 KRTAP4-16G5E9R7 235 aaPredicted RBP3.68□□□□□ -1.82
SCN2A-213ENST00000636769 KRTAP10-3P60369 221 aa3.68□□□□□ -1.82
SCN2A-213ENST00000636769 CHD9Q3L8U1 2897 aa3.67□□□□□ -1.82
SCN2A-213ENST00000636769 TNRC18O15417 2968 aaPredicted RBP3.67□□□□□ -1.82
SCN2A-213ENST00000636769 Q6ZSA8 131 aa3.66□□□□□ -1.82
SCN2A-213ENST00000636769 LAMA3Q16787 3333 aa3.66□□□□□ -1.82
SCN2A-213ENST00000636769 CHD7Q9P2D1 2997 aa3.65□□□□□ -1.82
SCN2A-213ENST00000636769 R4GN34 69 aa3.64□□□□□ -1.83
SCN2A-213ENST00000636769 BRCA2P51587 3418 aa3.63□□□□□ -1.83
SCN2A-213ENST00000636769 PANO1I0J062 215 aa3.63□□□□□ -1.83
SCN2A-213ENST00000636769 J3QL48 77 aa3.62□□□□□ -1.83
SCN2A-213ENST00000636769 PRUNE2Q8WUY3 3088 aa3.61□□□□□ -1.83
SCN2A-213ENST00000636769 PRRC2CQ9Y520 2896 aaKnown RBP3.6□□□□□ -1.83
SCN2A-213ENST00000636769 NDUFAF8A1L188 74 aa3.6□□□□□ -1.83
SCN2A-213ENST00000636769 A0A0C4DFX4 3053 aa3.6□□□□□ -1.83
SCN2A-213ENST00000636769 C5orf42Q9H799 3197 aa3.6□□□□□ -1.83
SCN2A-213ENST00000636769 USP24Q9UPU5 2620 aa3.59□□□□□ -1.83
SCN2A-213ENST00000636769 ADM2Q7Z4H4 148 aa3.59□□□□□ -1.83
SCN2A-213ENST00000636769 MGAM2Q2M2H8 2515 aa3.58□□□□□ -1.84
SCN2A-213ENST00000636769 SMR3BP02814 79 aaPredicted RBP3.58□□□□□ -1.84
SCN2A-213ENST00000636769 ATRQ13535 2644 aa3.57□□□□□ -1.84
SCN2A-213ENST00000636769 BAHCC1Q9P281 2608 aa3.57□□□□□ -1.84
SCN2A-213ENST00000636769 COL6A3P12111 3177 aa3.56□□□□□ -1.84
SCN2A-213ENST00000636769 TRANK1O15050 2925 aa3.56□□□□□ -1.84
SCN2A-213ENST00000636769 SEC61BP60468 96 aaKnown RBP3.56□□□□□ -1.84
SCN2A-213ENST00000636769 M0QZ58 72 aa3.56□□□□□ -1.84
SCN2A-213ENST00000636769 A8MU10 97 aa3.56□□□□□ -1.84
SCN2A-213ENST00000636769 SZT2Q5T011 3432 aa3.56□□□□□ -1.84
SCN2A-213ENST00000636769 ZNF292O60281 2723 aa3.55□□□□□ -1.84
SCN2A-213ENST00000636769 FLNAP21333 2647 aaKnown RBP3.55□□□□□ -1.84
SCN2A-213ENST00000636769 KRTAP11-1Q8IUC1 163 aa3.55□□□□□ -1.84
SCN2A-213ENST00000636769 RPS29P62273 56 aaKnown RBP3.54□□□□□ -1.84
SCN2A-213ENST00000636769 HELZ2Q9BYK8 2649 aaKnown RBP3.54□□□□□ -1.84
SCN2A-213ENST00000636769 A8MUU9 505 aa3.54□□□□□ -1.84
SCN2A-213ENST00000636769 PLAC4Q8WY50 150 aa3.53□□□□□ -1.84
SCN2A-213ENST00000636769 DMBT1Q9UGM3 2413 aaPredicted RBP3.53□□□□□ -1.84
SCN2A-213ENST00000636769 NOTCH2NLQ7Z3S9 236 aa3.52□□□□□ -1.85
SCN2A-213ENST00000636769 C20orf166-AS1Q96NR2 134 aa3.52□□□□□ -1.85
SCN2A-213ENST00000636769 CDH23Q9H251 3354 aa3.51□□□□□ -1.85
SCN2A-213ENST00000636769 ITPR3Q14573 2671 aa3.51□□□□□ -1.85
SCN2A-213ENST00000636769 KRTAP1-5Q9BYS1 174 aa3.5□□□□□ -1.85
SCN2A-213ENST00000636769 UNC80Q8N2C7 3258 aa3.49□□□□□ -1.85
SCN2A-213ENST00000636769 UNC79Q9P2D8 2635 aa3.49□□□□□ -1.85
SCN2A-213ENST00000636769 MAST4O15021 2626 aa3.49□□□□□ -1.85
SCN2A-213ENST00000636769 STAB1Q9NY15 2570 aa3.48□□□□□ -1.85
SCN2A-213ENST00000636769 CENPEQ02224 2701 aa3.47□□□□□ -1.85
SCN2A-213ENST00000636769 PP632Q6XCG6 107 aa3.47□□□□□ -1.85
SCN2A-213ENST00000636769 LAMA2P24043 3122 aaKnown RBP3.47□□□□□ -1.85
SCN2A-213ENST00000636769 KRTAP21-3Q3LHN1 58 aa3.46□□□□□ -1.85
SCN2A-213ENST00000636769 NBEAL1Q6ZS30 2694 aa3.46□□□□□ -1.86
SCN2A-213ENST00000636769 KRTAP13-1Q8IUC0 172 aa3.45□□□□□ -1.86
SCN2A-213ENST00000636769 BPTFQ12830 3046 aa3.45□□□□□ -1.86
SCN2A-213ENST00000636769 CFAP46Q8IYW2 2715 aa3.44□□□□□ -1.86
SCN2A-213ENST00000636769 CFAP54Q96N23 3096 aa3.43□□□□□ -1.86
SCN2A-213ENST00000636769 M0R2T5 61 aa3.43□□□□□ -1.86
SCN2A-213ENST00000636769 KRTAP7-1Q8IUC3 87 aa3.42□□□□□ -1.86
SCN2A-213ENST00000636769 VCANP13611 3396 aa3.4□□□□□ -1.86
SCN2A-213ENST00000636769 XIRP2A4UGR9 3374 aa3.4□□□□□ -1.87
SCN2A-213ENST00000636769 P0C880 135 aa3.4□□□□□ -1.87
SCN2A-213ENST00000636769 KRTAP10-1P60331 282 aa3.4□□□□□ -1.87
SCN2A-213ENST00000636769 IGSF10Q6WRI0 2623 aa3.39□□□□□ -1.87
SCN2A-213ENST00000636769 MGAQ8IWI9 3026 aa3.39□□□□□ -1.87
SCN2A-213ENST00000636769 TNP1P09430 55 aa3.39□□□□□ -1.87
SCN2A-213ENST00000636769 AKAP13Q12802 2813 aa3.38□□□□□ -1.87
SCN2A-213ENST00000636769 STAB2Q8WWQ8 2551 aa3.38□□□□□ -1.87
SCN2A-213ENST00000636769 GCN1Q92616 2671 aaKnown RBP3.38□□□□□ -1.87
SCN2A-213ENST00000636769 TRIOO75962 3097 aa3.38□□□□□ -1.87
SCN2A-213ENST00000636769 COL6A5A8TX70 2615 aa3.38□□□□□ -1.87
SCN2A-213ENST00000636769 CHD6Q8TD26 2715 aa3.37□□□□□ -1.87
SCN2A-213ENST00000636769 NOTCH1P46531 2555 aa3.37□□□□□ -1.87
SCN2A-213ENST00000636769 EYSQ5T1H1 3165 aa3.37□□□□□ -1.87
SCN2A-213ENST00000636769 TEP1Q99973 2627 aaKnown RBP3.37□□□□□ -1.87
SCN2A-213ENST00000636769 Q6ZRN7 208 aaPredicted RBP3.36□□□□□ -1.87
SCN2A-213ENST00000636769 H0YAA0 97 aa3.36□□□□□ -1.87
SCN2A-213ENST00000636769 KRTAP10-2P60368 255 aa3.35□□□□□ -1.87
SCN2A-213ENST00000636769 WDFY4Q6ZS81 3184 aa3.35□□□□□ -1.87
SCN2A-213ENST00000636769 C10orf95Q9H7T3 257 aa3.35□□□□□ -1.87
SCN2A-213ENST00000636769 KRTAP13-2Q52LG2 175 aa3.35□□□□□ -1.87
SCN2A-213ENST00000636769 DSPP15924 2871 aaKnown RBP3.35□□□□□ -1.87
SCN2A-213ENST00000636769 UBR5O95071 2799 aaPredicted RBP3.34□□□□□ -1.87
SCN2A-213ENST00000636769 SPTBN5Q9NRC6 3674 aaKnown RBP3.33□□□□□ -1.88
SCN2A-213ENST00000636769 Q5VSD8 79 aa3.33□□□□□ -1.88
SCN2A-213ENST00000636769 SETXQ7Z333 2677 aaKnown RBP3.31□□□□□ -1.88
SCN2A-213ENST00000636769 FLNCQ14315 2725 aa3.31□□□□□ -1.88
SCN2A-213ENST00000636769 VPS13AQ96RL7 3174 aa3.3□□□□□ -1.88
SCN2A-213ENST00000636769 NSD1Q96L73 2696 aaPredicted RBP3.29□□□□□ -1.88
SCN2A-213ENST00000636769 TEX15Q9BXT5 2789 aa3.29□□□□□ -1.88
SCN2A-213ENST00000636769 DMXL1Q9Y485 3027 aa3.29□□□□□ -1.88
SCN2A-213ENST00000636769 REV3LO60673 3130 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms