RNA–Protein interactions for RNA: ENST00000636662.2

SCN2A-212, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

TSL 5

Gene SCN2A, Length 9,456 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-212ENST00000636662 A0A087WTM6 91 aa3.37□□□□□ -1.87
SCN2A-212ENST00000636662 CASC10Q5T4H9 136 aa3.37□□□□□ -1.87
SCN2A-212ENST00000636662 P0C880 135 aa3.36□□□□□ -1.87
SCN2A-212ENST00000636662 A8MUU9 505 aa3.36□□□□□ -1.87
SCN2A-212ENST00000636662 SPTBN4Q9H254 2564 aa3.36□□□□□ -1.87
SCN2A-212ENST00000636662 SRCAPQ6ZRS2 3230 aa3.36□□□□□ -1.87
SCN2A-212ENST00000636662 KRTAP10-9P60411 292 aa3.35□□□□□ -1.87
SCN2A-212ENST00000636662 PANO1I0J062 215 aa3.35□□□□□ -1.87
SCN2A-212ENST00000636662 PRRC2CQ9Y520 2896 aaKnown RBP3.35□□□□□ -1.87
SCN2A-212ENST00000636662 ANKRD11Q6UB99 2663 aaPredicted RBP3.34□□□□□ -1.87
SCN2A-212ENST00000636662 ZFHX2Q9C0A1 2572 aaPredicted RBP3.33□□□□□ -1.88
SCN2A-212ENST00000636662 PP632Q6XCG6 107 aa3.33□□□□□ -1.88
SCN2A-212ENST00000636662 K7EIL1 84 aa3.32□□□□□ -1.88
SCN2A-212ENST00000636662 WWC2-AS2Q96NR7 200 aa3.32□□□□□ -1.88
SCN2A-212ENST00000636662 Q5VSD8 79 aa3.31□□□□□ -1.88
SCN2A-212ENST00000636662 CENPEQ02224 2701 aa3.3□□□□□ -1.88
SCN2A-212ENST00000636662 TNP1P09430 55 aa3.3□□□□□ -1.88
SCN2A-212ENST00000636662 KRTAP11-1Q8IUC1 163 aa3.3□□□□□ -1.88
SCN2A-212ENST00000636662 IGF2RP11717 2491 aa3.29□□□□□ -1.88
SCN2A-212ENST00000636662 FASNP49327 2511 aaKnown RBP3.28□□□□□ -1.88
SCN2A-212ENST00000636662 BDP1A6H8Y1 2624 aa3.28□□□□□ -1.88
SCN2A-212ENST00000636662 KMT2BQ9UMN6 2715 aaPredicted RBP3.26□□□□□ -1.89
SCN2A-212ENST00000636662 RPS29P62273 56 aaKnown RBP3.26□□□□□ -1.89
SCN2A-212ENST00000636662 KRTAP24-1Q3LI83 254 aa3.24□□□□□ -1.89
SCN2A-212ENST00000636662 USP24Q9UPU5 2620 aa3.23□□□□□ -1.89
SCN2A-212ENST00000636662 A0A0C4DFX4 3053 aa3.22□□□□□ -1.89
SCN2A-212ENST00000636662 KRTAP10-8P60410 259 aa3.22□□□□□ -1.89
SCN2A-212ENST00000636662 KRTAP10-11P60412 298 aa3.21□□□□□ -1.9
SCN2A-212ENST00000636662 CENPFP49454 3210 aa3.19□□□□□ -1.9
SCN2A-212ENST00000636662 HECTD1Q9ULT8 2610 aa3.19□□□□□ -1.9
SCN2A-212ENST00000636662 GCN1Q92616 2671 aaKnown RBP3.18□□□□□ -1.9
SCN2A-212ENST00000636662 EP400Q96L91 3159 aa3.16□□□□□ -1.9
SCN2A-212ENST00000636662 HELZ2Q9BYK8 2649 aaKnown RBP3.15□□□□□ -1.91
SCN2A-212ENST00000636662 REV3LO60673 3130 aa3.14□□□□□ -1.91
SCN2A-212ENST00000636662 STAB1Q9NY15 2570 aa3.14□□□□□ -1.91
SCN2A-212ENST00000636662 KRTAP13-1Q8IUC0 172 aa3.14□□□□□ -1.91
SCN2A-212ENST00000636662 NOTCH1P46531 2555 aa3.14□□□□□ -1.91
SCN2A-212ENST00000636662 ITPR1Q14643 2758 aa3.14□□□□□ -1.91
SCN2A-212ENST00000636662 UNC79Q9P2D8 2635 aa3.14□□□□□ -1.91
SCN2A-212ENST00000636662 NBEAL1Q6ZS30 2694 aa3.13□□□□□ -1.91
SCN2A-212ENST00000636662 H0YAA0 97 aa3.13□□□□□ -1.91
SCN2A-212ENST00000636662 CHD6Q8TD26 2715 aa3.12□□□□□ -1.91
SCN2A-212ENST00000636662 DNAH12Q6ZR08 3092 aa3.12□□□□□ -1.91
SCN2A-212ENST00000636662 AKAP13Q12802 2813 aa3.11□□□□□ -1.91
SCN2A-212ENST00000636662 MAP1AP78559 2803 aaPredicted RBP3.1□□□□□ -1.91
SCN2A-212ENST00000636662 FLNAP21333 2647 aaKnown RBP3.09□□□□□ -1.91
SCN2A-212ENST00000636662 BAHCC1Q9P281 2608 aa3.09□□□□□ -1.91
SCN2A-212ENST00000636662 STAB2Q8WWQ8 2551 aa3.08□□□□□ -1.92
SCN2A-212ENST00000636662 KRTAP10-3P60369 221 aa3.08□□□□□ -1.92
SCN2A-212ENST00000636662 TRANK1O15050 2925 aa3.08□□□□□ -1.92
SCN2A-212ENST00000636662 KRTAP13-3Q3SY46 172 aa3.05□□□□□ -1.92
SCN2A-212ENST00000636662 KRTAP1-3Q8IUG1 177 aa3.05□□□□□ -1.92
SCN2A-212ENST00000636662 MGAM2Q2M2H8 2515 aa3.04□□□□□ -1.92
SCN2A-212ENST00000636662 APCP25054 2843 aa3.04□□□□□ -1.92
SCN2A-212ENST00000636662 KRTAP7-1Q8IUC3 87 aa3.04□□□□□ -1.92
SCN2A-212ENST00000636662 NSD1Q96L73 2696 aaPredicted RBP3.04□□□□□ -1.92
SCN2A-212ENST00000636662 CFAP46Q8IYW2 2715 aa3.04□□□□□ -1.92
SCN2A-212ENST00000636662 FREM2Q5SZK8 3169 aa3.04□□□□□ -1.92
SCN2A-212ENST00000636662 ITPR3Q14573 2671 aa3.02□□□□□ -1.93
SCN2A-212ENST00000636662 ZFHX3Q15911 3703 aa3.02□□□□□ -1.93
SCN2A-212ENST00000636662 INE1O15225 51 aa3.02□□□□□ -1.93
SCN2A-212ENST00000636662 KRTAP1-1Q07627 177 aa3.02□□□□□ -1.93
SCN2A-212ENST00000636662 ATRQ13535 2644 aa3.01□□□□□ -1.93
SCN2A-212ENST00000636662 Q6ZRN7 208 aaPredicted RBP3□□□□□ -1.93
SCN2A-212ENST00000636662 KRTAP15-1Q3LI76 137 aa2.99□□□□□ -1.93
SCN2A-212ENST00000636662 PCNTO95613 3336 aa2.98□□□□□ -1.93
SCN2A-212ENST00000636662 KRTAP10-1P60331 282 aa2.97□□□□□ -1.93
SCN2A-212ENST00000636662 C5orf42Q9H799 3197 aa2.97□□□□□ -1.93
SCN2A-212ENST00000636662 A0A1B0GVY2 172 aa2.97□□□□□ -1.93
SCN2A-212ENST00000636662 GOLGB1Q14789 3259 aaKnown RBP2.97□□□□□ -1.93
SCN2A-212ENST00000636662 CFAP54Q96N23 3096 aa2.97□□□□□ -1.93
SCN2A-212ENST00000636662 KRTAP1-5Q9BYS1 174 aa2.97□□□□□ -1.93
SCN2A-212ENST00000636662 CEP350Q5VT06 3117 aa2.96□□□□□ -1.94
SCN2A-212ENST00000636662 KRTAP12-2P59991 146 aa2.96□□□□□ -1.94
SCN2A-212ENST00000636662 COL6A5A8TX70 2615 aa2.96□□□□□ -1.94
SCN2A-212ENST00000636662 NBEAL2Q6ZNJ1 2754 aa2.95□□□□□ -1.94
SCN2A-212ENST00000636662 MGAQ8IWI9 3026 aa2.94□□□□□ -1.94
SCN2A-212ENST00000636662 KRTAP10-2P60368 255 aa2.94□□□□□ -1.94
SCN2A-212ENST00000636662 TEP1Q99973 2627 aaKnown RBP2.94□□□□□ -1.94
SCN2A-212ENST00000636662 CHD7Q9P2D1 2997 aa2.93□□□□□ -1.94
SCN2A-212ENST00000636662 DSPP15924 2871 aaKnown RBP2.93□□□□□ -1.94
SCN2A-212ENST00000636662 UBR5O95071 2799 aaPredicted RBP2.93□□□□□ -1.94
SCN2A-212ENST00000636662 PRO2289Q9P1D8 64 aa2.93□□□□□ -1.94
SCN2A-212ENST00000636662 LRBAP50851 2863 aa2.93□□□□□ -1.94
SCN2A-212ENST00000636662 TEX15Q9BXT5 2789 aa2.93□□□□□ -1.94
SCN2A-212ENST00000636662 UTP20O75691 2785 aaKnown RBP2.93□□□□□ -1.94
SCN2A-212ENST00000636662 IGSF10Q6WRI0 2623 aa2.92□□□□□ -1.94
SCN2A-212ENST00000636662 SETXQ7Z333 2677 aaKnown RBP2.92□□□□□ -1.94
SCN2A-212ENST00000636662 FRYQ5TBA9 3013 aa2.92□□□□□ -1.94
SCN2A-212ENST00000636662 TNRC18O15417 2968 aaPredicted RBP2.91□□□□□ -1.94
SCN2A-212ENST00000636662 LAMA2P24043 3122 aaKnown RBP2.91□□□□□ -1.94
SCN2A-212ENST00000636662 KRTAP13-2Q52LG2 175 aa2.91□□□□□ -1.94
SCN2A-212ENST00000636662 NBEAQ8NFP9 2946 aa2.91□□□□□ -1.94
SCN2A-212ENST00000636662 CHD9Q3L8U1 2897 aa2.89□□□□□ -1.95
SCN2A-212ENST00000636662 TPRXLQ17RH7 258 aa2.89□□□□□ -1.95
SCN2A-212ENST00000636662 KALRNO60229 2985 aa2.89□□□□□ -1.95
SCN2A-212ENST00000636662 MAST4O15021 2626 aa2.88□□□□□ -1.95
SCN2A-212ENST00000636662 UTRNP46939 3433 aa2.88□□□□□ -1.95
SCN2A-212ENST00000636662 ZZEF1O43149 2961 aa2.88□□□□□ -1.95
SCN2A-212ENST00000636662 ITPR2Q14571 2701 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms