RNA–Protein interactions for RNA: ENST00000636120.1

PDE4D-228, Transcript of phosphodiesterase 4D, humanhuman

TSL 5 BASIC

Gene PDE4D, Length 6,659 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-228ENST00000636120 ASB16-AS1Q495Z4 193 aa3.84□□□□□ -1.79
PDE4D-228ENST00000636120 A0A1B0GU33 70 aa3.84□□□□□ -1.8
PDE4D-228ENST00000636120 RPS29P62273 56 aaKnown RBP3.84□□□□□ -1.8
PDE4D-228ENST00000636120 Q8N9P0 234 aaPredicted RBP3.83□□□□□ -1.8
PDE4D-228ENST00000636120 Q6ZRN7 208 aaPredicted RBP3.83□□□□□ -1.8
PDE4D-228ENST00000636120 KRTAP21-3Q3LHN1 58 aa3.83□□□□□ -1.8
PDE4D-228ENST00000636120 PCNTO95613 3336 aa3.83□□□□□ -1.8
PDE4D-228ENST00000636120 HECTD1Q9ULT8 2610 aa3.82□□□□□ -1.8
PDE4D-228ENST00000636120 AKAP13Q12802 2813 aa3.82□□□□□ -1.8
PDE4D-228ENST00000636120 Q5XG85 94 aa3.82□□□□□ -1.8
PDE4D-228ENST00000636120 DMAC1Q96GE9 116 aa3.82□□□□□ -1.8
PDE4D-228ENST00000636120 PANO1I0J062 215 aa3.81□□□□□ -1.8
PDE4D-228ENST00000636120 SEC61BP60468 96 aaKnown RBP3.81□□□□□ -1.8
PDE4D-228ENST00000636120 KRTAP29-1A8MX34 341 aaPredicted RBP3.81□□□□□ -1.8
PDE4D-228ENST00000636120 A0A0D9SG42 100 aa3.81□□□□□ -1.8
PDE4D-228ENST00000636120 CSAG1Q6PB30 78 aa3.81□□□□□ -1.8
PDE4D-228ENST00000636120 CYSTM1Q9H1C7 97 aa3.81□□□□□ -1.8
PDE4D-228ENST00000636120 SPINK7P58062 85 aa3.8□□□□□ -1.8
PDE4D-228ENST00000636120 HELZ2Q9BYK8 2649 aaKnown RBP3.8□□□□□ -1.8
PDE4D-228ENST00000636120 LUZP6Q538Z0 58 aa3.79□□□□□ -1.8
PDE4D-228ENST00000636120 BRCA2P51587 3418 aa3.79□□□□□ -1.8
PDE4D-228ENST00000636120 USP24Q9UPU5 2620 aa3.78□□□□□ -1.8
PDE4D-228ENST00000636120 OXTP01178 125 aa3.78□□□□□ -1.8
PDE4D-228ENST00000636120 RANBP2P49792 3224 aaKnown RBP3.78□□□□□ -1.8
PDE4D-228ENST00000636120 KRTAP16-1A8MUX0 517 aa3.77□□□□□ -1.81
PDE4D-228ENST00000636120 Q5VV11 94 aa3.77□□□□□ -1.81
PDE4D-228ENST00000636120 KRTAP13-1Q8IUC0 172 aa3.77□□□□□ -1.81
PDE4D-228ENST00000636120 KRTAP7-1Q8IUC3 87 aa3.77□□□□□ -1.81
PDE4D-228ENST00000636120 A0A087X002 238 aa3.75□□□□□ -1.81
PDE4D-228ENST00000636120 MGAQ8IWI9 3026 aa3.75□□□□□ -1.81
PDE4D-228ENST00000636120 CFAP46Q8IYW2 2715 aa3.75□□□□□ -1.81
PDE4D-228ENST00000636120 KRTAP11-1Q8IUC1 163 aa3.75□□□□□ -1.81
PDE4D-228ENST00000636120 LAMA3Q16787 3333 aa3.75□□□□□ -1.81
PDE4D-228ENST00000636120 KMT2BQ9UMN6 2715 aaPredicted RBP3.74□□□□□ -1.81
PDE4D-228ENST00000636120 ATRQ13535 2644 aa3.73□□□□□ -1.81
PDE4D-228ENST00000636120 CAMK2N1Q7Z7J9 78 aa3.72□□□□□ -1.81
PDE4D-228ENST00000636120 IGSF10Q6WRI0 2623 aa3.72□□□□□ -1.81
PDE4D-228ENST00000636120 M0R2T5 61 aa3.72□□□□□ -1.81
PDE4D-228ENST00000636120 H1FX-AS1Q4G0G2 97 aa3.71□□□□□ -1.82
PDE4D-228ENST00000636120 CDH23Q9H251 3354 aa3.7□□□□□ -1.82
PDE4D-228ENST00000636120 TNRC18O15417 2968 aaPredicted RBP3.69□□□□□ -1.82
PDE4D-228ENST00000636120 KRTAP13-2Q52LG2 175 aa3.68□□□□□ -1.82
PDE4D-228ENST00000636120 R4GN34 69 aa3.68□□□□□ -1.82
PDE4D-228ENST00000636120 RPL37P61927 97 aaKnown RBP3.68□□□□□ -1.82
PDE4D-228ENST00000636120 NOTCH2NLQ7Z3S9 236 aa3.67□□□□□ -1.82
PDE4D-228ENST00000636120 MAST4O15021 2626 aa3.65□□□□□ -1.82
PDE4D-228ENST00000636120 ROMO1P60602 79 aa3.65□□□□□ -1.83
PDE4D-228ENST00000636120 TRIOO75962 3097 aa3.64□□□□□ -1.83
PDE4D-228ENST00000636120 PRAC1Q96KF2 57 aa3.64□□□□□ -1.83
PDE4D-228ENST00000636120 FLNBO75369 2602 aaKnown RBP3.64□□□□□ -1.83
PDE4D-228ENST00000636120 CFAP54Q96N23 3096 aa3.64□□□□□ -1.83
PDE4D-228ENST00000636120 UNC79Q9P2D8 2635 aa3.64□□□□□ -1.83
PDE4D-228ENST00000636120 CHD6Q8TD26 2715 aa3.64□□□□□ -1.83
PDE4D-228ENST00000636120 SZT2Q5T011 3432 aa3.63□□□□□ -1.83
PDE4D-228ENST00000636120 SPTBN5Q9NRC6 3674 aaKnown RBP3.63□□□□□ -1.83
PDE4D-228ENST00000636120 TEP1Q99973 2627 aaKnown RBP3.63□□□□□ -1.83
PDE4D-228ENST00000636120 ADM2Q7Z4H4 148 aa3.63□□□□□ -1.83
PDE4D-228ENST00000636120 PRUNE2Q8WUY3 3088 aa3.63□□□□□ -1.83
PDE4D-228ENST00000636120 A0A0C4DFX4 3053 aa3.63□□□□□ -1.83
PDE4D-228ENST00000636120 TEX15Q9BXT5 2789 aa3.63□□□□□ -1.83
PDE4D-228ENST00000636120 MGAM2Q2M2H8 2515 aa3.62□□□□□ -1.83
PDE4D-228ENST00000636120 M0QZ58 72 aa3.62□□□□□ -1.83
PDE4D-228ENST00000636120 SPATA8Q6RVD6 105 aa3.62□□□□□ -1.83
PDE4D-228ENST00000636120 UNC80Q8N2C7 3258 aa3.62□□□□□ -1.83
PDE4D-228ENST00000636120 XIRP2A4UGR9 3374 aa3.61□□□□□ -1.83
PDE4D-228ENST00000636120 LAMA2P24043 3122 aaKnown RBP3.61□□□□□ -1.83
PDE4D-228ENST00000636120 DSPP15924 2871 aaKnown RBP3.6□□□□□ -1.83
PDE4D-228ENST00000636120 WDFY4Q6ZS81 3184 aa3.6□□□□□ -1.83
PDE4D-228ENST00000636120 SETXQ7Z333 2677 aaKnown RBP3.6□□□□□ -1.83
PDE4D-228ENST00000636120 A8MUU9 505 aa3.6□□□□□ -1.83
PDE4D-228ENST00000636120 C20orf166-AS1Q96NR2 134 aa3.59□□□□□ -1.83
PDE4D-228ENST00000636120 DNAH14Q0VDD8 3507 aa3.59□□□□□ -1.84
PDE4D-228ENST00000636120 LAMA1P25391 3075 aa3.58□□□□□ -1.84
PDE4D-228ENST00000636120 ITPR2Q14571 2701 aa3.58□□□□□ -1.84
PDE4D-228ENST00000636120 PLAC4Q8WY50 150 aa3.58□□□□□ -1.84
PDE4D-228ENST00000636120 GCN1Q92616 2671 aaKnown RBP3.58□□□□□ -1.84
PDE4D-228ENST00000636120 VPS13AQ96RL7 3174 aa3.56□□□□□ -1.84
PDE4D-228ENST00000636120 FRYQ5TBA9 3013 aa3.56□□□□□ -1.84
PDE4D-228ENST00000636120 CENPEQ02224 2701 aa3.56□□□□□ -1.84
PDE4D-228ENST00000636120 KRTAP1-4P0C5Y4 121 aa3.55□□□□□ -1.84
PDE4D-228ENST00000636120 UTP20O75691 2785 aaKnown RBP3.55□□□□□ -1.84
PDE4D-228ENST00000636120 LRBAP50851 2863 aa3.54□□□□□ -1.84
PDE4D-228ENST00000636120 COL6A3P12111 3177 aa3.54□□□□□ -1.84
PDE4D-228ENST00000636120 UBR5O95071 2799 aaPredicted RBP3.52□□□□□ -1.85
PDE4D-228ENST00000636120 A6NN06 94 aa3.52□□□□□ -1.85
PDE4D-228ENST00000636120 BAHCC1Q9P281 2608 aa3.52□□□□□ -1.85
PDE4D-228ENST00000636120 VCANP13611 3396 aa3.52□□□□□ -1.85
PDE4D-228ENST00000636120 REV3LO60673 3130 aa3.5□□□□□ -1.85
PDE4D-228ENST00000636120 USP34Q70CQ2 3546 aa3.5□□□□□ -1.85
PDE4D-228ENST00000636120 EYSQ5T1H1 3165 aa3.5□□□□□ -1.85
PDE4D-228ENST00000636120 MAP1AP78559 2803 aaPredicted RBP3.5□□□□□ -1.85
PDE4D-228ENST00000636120 CELSR3Q9NYQ7 3312 aa3.49□□□□□ -1.85
PDE4D-228ENST00000636120 HRNRQ86YZ3 2850 aaPredicted RBP3.49□□□□□ -1.85
PDE4D-228ENST00000636120 COL6A5A8TX70 2615 aa3.49□□□□□ -1.85
PDE4D-228ENST00000636120 APCP25054 2843 aa3.49□□□□□ -1.85
PDE4D-228ENST00000636120 NSD1Q96L73 2696 aaPredicted RBP3.49□□□□□ -1.85
PDE4D-228ENST00000636120 NBEAL2Q6ZNJ1 2754 aa3.48□□□□□ -1.85
PDE4D-228ENST00000636120 XP32Q5T750 250 aa3.48□□□□□ -1.85
PDE4D-228ENST00000636120 ITPR1Q14643 2758 aa3.47□□□□□ -1.85
PDE4D-228ENST00000636120 KRTAP25-1Q3LHN0 102 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms