RNA–Protein interactions for RNA: ENST00000635675.2

LINC00339-210, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-210ENST00000635675 TYMSOSQ8TAI1 123 aa5.72□□□□□ -1.49
LINC00339-210ENST00000635675 TRBV7-6A0A0J9YX20 115 aa5.71□□□□□ -1.5
LINC00339-210ENST00000635675 C9JAW5 83 aa5.71□□□□□ -1.5
LINC00339-210ENST00000635675 ELOF1P60002 83 aaKnown RBP5.71□□□□□ -1.5
LINC00339-210ENST00000635675 UBE2V1Q13404 147 aa5.71□□□□□ -1.5
LINC00339-210ENST00000635675 LINC00483Q53H64 154 aa5.71□□□□□ -1.5
LINC00339-210ENST00000635675 TRBV20-1A0A075B6N2 111 aa5.7□□□□□ -1.5
LINC00339-210ENST00000635675 LST1O00453 97 aa5.7□□□□□ -1.5
LINC00339-210ENST00000635675 XP32Q5T750 250 aa5.7□□□□□ -1.5
LINC00339-210ENST00000635675 H0YGX0 51 aa5.69□□□□□ -1.5
LINC00339-210ENST00000635675 GAGE2AQ6NT46 116 aa5.69□□□□□ -1.5
LINC00339-210ENST00000635675 C3orf22Q8N5N4 141 aa5.69□□□□□ -1.5
LINC00339-210ENST00000635675 DHRS4-AS1Q9P1J3 65 aa5.69□□□□□ -1.5
LINC00339-210ENST00000635675 DNAL4O96015 105 aa5.68□□□□□ -1.5
LINC00339-210ENST00000635675 ST20-AS1Q8NBB2 130 aa5.68□□□□□ -1.5
LINC00339-210ENST00000635675 LINC00575Q6W349 94 aa5.67□□□□□ -1.5
LINC00339-210ENST00000635675 HMCN2Q8NDA2 5059 aa5.67□□□□□ -1.5
LINC00339-210ENST00000635675 A0A1B0GV72 72 aa5.66□□□□□ -1.5
LINC00339-210ENST00000635675 hADV29S1A0JD25 119 aa5.66□□□□□ -1.5
LINC00339-210ENST00000635675 SLC25A20O43772 301 aa5.66□□□□□ -1.5
LINC00339-210ENST00000635675 TRACP01848 142 aa5.65□□□□□ -1.5
LINC00339-210ENST00000635675 SPRR1BP22528 89 aa5.65□□□□□ -1.5
LINC00339-210ENST00000635675 LINC00304Q8N9R0 145 aa5.65□□□□□ -1.5
LINC00339-210ENST00000635675 DEFB105AQ8NG35 78 aa5.65□□□□□ -1.51
LINC00339-210ENST00000635675 PRO0461Q9UI25 63 aa5.65□□□□□ -1.51
LINC00339-210ENST00000635675 SNCGO76070 127 aa5.64□□□□□ -1.51
LINC00339-210ENST00000635675 Q6ZQY7 126 aa5.64□□□□□ -1.51
LINC00339-210ENST00000635675 IGLV9-49A0A0B4J1Y8 123 aa5.63□□□□□ -1.51
LINC00339-210ENST00000635675 BAALC-AS2P0C853 105 aa5.63□□□□□ -1.51
LINC00339-210ENST00000635675 SSBP3-AS1Q7Z2R9 100 aa5.63□□□□□ -1.51
LINC00339-210ENST00000635675 Q8NBF4 154 aa5.63□□□□□ -1.51
LINC00339-210ENST00000635675 ORMDL1Q9P0S3 153 aa5.63□□□□□ -1.51
LINC00339-210ENST00000635675 A0A1B0GX51 115 aa5.62□□□□□ -1.51
LINC00339-210ENST00000635675 MOBPQ13875 183 aa5.62□□□□□ -1.51
LINC00339-210ENST00000635675 SPAG11AQ6PDA7 123 aa5.62□□□□□ -1.51
LINC00339-210ENST00000635675 ANKRD29Q8N6D5 301 aa5.62□□□□□ -1.51
LINC00339-210ENST00000635675 IGLV5-48A0A075B6I7 105 aa5.61□□□□□ -1.51
LINC00339-210ENST00000635675 TEX49A0A1B0GTD5 131 aa5.61□□□□□ -1.51
LINC00339-210ENST00000635675 LINC01547P58512 204 aaPredicted RBP5.61□□□□□ -1.51
LINC00339-210ENST00000635675 F8W1H4 67 aa5.6□□□□□ -1.51
LINC00339-210ENST00000635675 H3BT86 120 aa5.6□□□□□ -1.51
LINC00339-210ENST00000635675 ETDBQ3ZM63 59 aa5.6□□□□□ -1.51
LINC00339-210ENST00000635675 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.59□□□□□ -1.51
LINC00339-210ENST00000635675 SMIM29Q86T20 159 aa5.59□□□□□ -1.51
LINC00339-210ENST00000635675 LAMTOR3Q9UHA4 124 aa5.59□□□□□ -1.51
LINC00339-210ENST00000635675 SPINK1P00995 79 aa5.58□□□□□ -1.52
LINC00339-210ENST00000635675 C9orf153Q5TBE3 101 aa5.58□□□□□ -1.52
LINC00339-210ENST00000635675 Q8N377 158 aa5.58□□□□□ -1.52
LINC00339-210ENST00000635675 PRR4Q16378 134 aa5.57□□□□□ -1.52
LINC00339-210ENST00000635675 TMEM256-PLSCR3K7ERE1 68 aa5.56□□□□□ -1.52
LINC00339-210ENST00000635675 TEN1Q86WV5 123 aa5.56□□□□□ -1.52
LINC00339-210ENST00000635675 RETNLBQ9BQ08 111 aa5.56□□□□□ -1.52
LINC00339-210ENST00000635675 KRTAP4-8Q9BYQ9 185 aa5.56□□□□□ -1.52
LINC00339-210ENST00000635675 RPS29P62273 56 aaKnown RBP5.55□□□□□ -1.52
LINC00339-210ENST00000635675 OCIAD2Q56VL3 154 aa5.54□□□□□ -1.52
LINC00339-210ENST00000635675 C14orf132Q9NPU4 83 aa5.54□□□□□ -1.52
LINC00339-210ENST00000635675 UBR4Q5T4S7 5183 aa5.54□□□□□ -1.52
LINC00339-210ENST00000635675 NDUFV3P56181 108 aaKnown RBP5.53□□□□□ -1.52
LINC00339-210ENST00000635675 PPDPFLQ8WWR9 84 aa5.53□□□□□ -1.52
LINC00339-210ENST00000635675 LRP2P98164 4655 aa5.52□□□□□ -1.53
LINC00339-210ENST00000635675 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.51□□□□□ -1.53
LINC00339-210ENST00000635675 GHRHP01286 108 aa5.51□□□□□ -1.53
LINC00339-210ENST00000635675 CD164Q04900 197 aa5.51□□□□□ -1.53
LINC00339-210ENST00000635675 IGLV7-46A0A075B6I9 117 aa5.5□□□□□ -1.53
LINC00339-210ENST00000635675 A0A0G2JQZ4 141 aa5.5□□□□□ -1.53
LINC00339-210ENST00000635675 F8WEM9 126 aa5.5□□□□□ -1.53
LINC00339-210ENST00000635675 H3BQ85 93 aa5.5□□□□□ -1.53
LINC00339-210ENST00000635675 VPS25Q9BRG1 176 aa5.5□□□□□ -1.53
LINC00339-210ENST00000635675 IGLV8-61A0A075B6I0 122 aa5.49□□□□□ -1.53
LINC00339-210ENST00000635675 RBM3P98179 157 aaKnown RBP5.49□□□□□ -1.53
LINC00339-210ENST00000635675 HRCT1Q6UXD1 115 aa5.49□□□□□ -1.53
LINC00339-210ENST00000635675 FP248Q71RG6 208 aaPredicted RBP5.49□□□□□ -1.53
LINC00339-210ENST00000635675 LPAP08519 4548 aa5.49□□□□□ -1.53
LINC00339-210ENST00000635675 KRTAP9-6A0A140TA67 174 aa5.48□□□□□ -1.53
LINC00339-210ENST00000635675 JMJD7-PLA2G4BH0Y9G9 81 aa5.48□□□□□ -1.53
LINC00339-210ENST00000635675 KRTAP9-2Q9BYQ4 174 aa5.48□□□□□ -1.53
LINC00339-210ENST00000635675 TPRXLQ17RH7 258 aa5.48□□□□□ -1.53
LINC00339-210ENST00000635675 DSCR8Q96T75 97 aa5.48□□□□□ -1.53
LINC00339-210ENST00000635675 Q5XG85 94 aa5.47□□□□□ -1.53
LINC00339-210ENST00000635675 Q6JHZ5 121 aa5.47□□□□□ -1.53
LINC00339-210ENST00000635675 OBSCN-AS1Q96MR7 158 aa5.47□□□□□ -1.53
LINC00339-210ENST00000635675 LIMD2Q9BT23 127 aa5.47□□□□□ -1.53
LINC00339-210ENST00000635675 IGFL1Q6UW32 110 aa5.46□□□□□ -1.54
LINC00339-210ENST00000635675 J3QR89 54 aa5.44□□□□□ -1.54
LINC00339-210ENST00000635675 K7ERU9 68 aa5.44□□□□□ -1.54
LINC00339-210ENST00000635675 KRTAP13-3Q3SY46 172 aa5.44□□□□□ -1.54
LINC00339-210ENST00000635675 Q6ZQT0 140 aa5.44□□□□□ -1.54
LINC00339-210ENST00000635675 TRBV7-4A0A0J9YYF1 115 aa5.43□□□□□ -1.54
LINC00339-210ENST00000635675 CCKP06307 115 aa5.43□□□□□ -1.54
LINC00339-210ENST00000635675 LOC110117498A0A087WWA1 95 aa5.42□□□□□ -1.54
LINC00339-210ENST00000635675 CDIP1Q9H305 208 aa5.42□□□□□ -1.54
LINC00339-210ENST00000635675 TRBV7-7A0A0K0K1E9 115 aa5.41□□□□□ -1.54
LINC00339-210ENST00000635675 C1orf195Q5TG92 126 aa5.41□□□□□ -1.54
LINC00339-210ENST00000635675 A0A1W2PNM2 257 aa5.4□□□□□ -1.54
LINC00339-210ENST00000635675 RNF213Q63HN8 5207 aa5.4□□□□□ -1.55
LINC00339-210ENST00000635675 Q6Q795 121 aa5.4□□□□□ -1.55
LINC00339-210ENST00000635675 PDE6GP18545 87 aa5.39□□□□□ -1.55
LINC00339-210ENST00000635675 ASB16-AS1Q495Z4 193 aa5.39□□□□□ -1.55
LINC00339-210ENST00000635675 LINC00846Q9NV44 126 aa5.38□□□□□ -1.55
LINC00339-210ENST00000635675 A0A087WSZ3 146 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 141.8 ms