RNA–Protein interactions for RNA: ENST00000635193.1

COL11A1-211, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL11A1, Length 5,289 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-211ENST00000635193 PSORS1C2Q9UIG4 136 aa7.39□□□□□ -1.23
COL11A1-211ENST00000635193 LINC00304Q8N9R0 145 aa7.38□□□□□ -1.23
COL11A1-211ENST00000635193 MGAQ8IWI9 3026 aa7.38□□□□□ -1.23
COL11A1-211ENST00000635193 IGLV7-43P04211 117 aa7.37□□□□□ -1.23
COL11A1-211ENST00000635193 CR1P17927 2039 aa7.36□□□□□ -1.23
COL11A1-211ENST00000635193 C9orf92A6NGG3 77 aa7.36□□□□□ -1.23
COL11A1-211ENST00000635193 CSAG1Q6PB30 78 aa7.36□□□□□ -1.23
COL11A1-211ENST00000635193 HRES1P13985 223 aa7.36□□□□□ -1.23
COL11A1-211ENST00000635193 A0A1B0GU33 70 aa7.35□□□□□ -1.23
COL11A1-211ENST00000635193 SPINK7P58062 85 aa7.35□□□□□ -1.23
COL11A1-211ENST00000635193 Q8NDZ9 215 aa7.35□□□□□ -1.23
COL11A1-211ENST00000635193 COL6A3P12111 3177 aa7.34□□□□□ -1.23
COL11A1-211ENST00000635193 KRTAP1-3Q8IUG1 177 aa7.33□□□□□ -1.24
COL11A1-211ENST00000635193 MMP24-AS1A0A0U1RRL7 71 aa7.32□□□□□ -1.24
COL11A1-211ENST00000635193 DSPP15924 2871 aaKnown RBP7.31□□□□□ -1.24
COL11A1-211ENST00000635193 STAB1Q9NY15 2570 aa7.31□□□□□ -1.24
COL11A1-211ENST00000635193 VCANP13611 3396 aa7.29□□□□□ -1.24
COL11A1-211ENST00000635193 AKAP13Q12802 2813 aa7.28□□□□□ -1.24
COL11A1-211ENST00000635193 KRTAP1-1Q07627 177 aa7.28□□□□□ -1.24
COL11A1-211ENST00000635193 CFAP54Q96N23 3096 aa7.27□□□□□ -1.24
COL11A1-211ENST00000635193 MAP1AP78559 2803 aaPredicted RBP7.27□□□□□ -1.25
COL11A1-211ENST00000635193 TNRC18O15417 2968 aaPredicted RBP7.27□□□□□ -1.25
COL11A1-211ENST00000635193 DMAC1Q96GE9 116 aa7.26□□□□□ -1.25
COL11A1-211ENST00000635193 J3QL48 77 aa7.25□□□□□ -1.25
COL11A1-211ENST00000635193 SPRR1AP35321 89 aa7.25□□□□□ -1.25
COL11A1-211ENST00000635193 COX6B2Q6YFQ2 88 aa7.25□□□□□ -1.25
COL11A1-211ENST00000635193 TEX15Q9BXT5 2789 aa7.25□□□□□ -1.25
COL11A1-211ENST00000635193 COL6A5A8TX70 2615 aa7.24□□□□□ -1.25
COL11A1-211ENST00000635193 LAMA1P25391 3075 aa7.23□□□□□ -1.25
COL11A1-211ENST00000635193 VPS13AQ96RL7 3174 aa7.23□□□□□ -1.25
COL11A1-211ENST00000635193 DNAH14Q0VDD8 3507 aa7.23□□□□□ -1.25
COL11A1-211ENST00000635193 BAHCC1Q9P281 2608 aa7.23□□□□□ -1.25
COL11A1-211ENST00000635193 EYSQ5T1H1 3165 aa7.22□□□□□ -1.25
COL11A1-211ENST00000635193 SPTBN5Q9NRC6 3674 aaKnown RBP7.22□□□□□ -1.25
COL11A1-211ENST00000635193 A0A0A0MQY5 61 aa7.21□□□□□ -1.26
COL11A1-211ENST00000635193 SMR3BP02814 79 aaPredicted RBP7.21□□□□□ -1.26
COL11A1-211ENST00000635193 CHD6Q8TD26 2715 aa7.2□□□□□ -1.26
COL11A1-211ENST00000635193 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.19□□□□□ -1.26
COL11A1-211ENST00000635193 LINC00472Q9H8W2 130 aa7.19□□□□□ -1.26
COL11A1-211ENST00000635193 ASB16-AS1Q495Z4 193 aa7.17□□□□□ -1.26
COL11A1-211ENST00000635193 UNC79Q9P2D8 2635 aa7.16□□□□□ -1.26
COL11A1-211ENST00000635193 CELSR3Q9NYQ7 3312 aa7.16□□□□□ -1.26
COL11A1-211ENST00000635193 IGSF10Q6WRI0 2623 aa7.16□□□□□ -1.26
COL11A1-211ENST00000635193 Q5W150 140 aa7.16□□□□□ -1.26
COL11A1-211ENST00000635193 SPRR1BP22528 89 aa7.14□□□□□ -1.27
COL11A1-211ENST00000635193 LINC00483Q53H64 154 aa7.12□□□□□ -1.27
COL11A1-211ENST00000635193 NOTCH1P46531 2555 aa7.12□□□□□ -1.27
COL11A1-211ENST00000635193 ZCCHC13Q8WW36 166 aaKnown RBP7.11□□□□□ -1.27
COL11A1-211ENST00000635193 GCN1Q92616 2671 aaKnown RBP7.09□□□□□ -1.27
COL11A1-211ENST00000635193 TNP2Q05952 138 aa7.09□□□□□ -1.27
COL11A1-211ENST00000635193 KRTAP26-1Q6PEX3 210 aa7.08□□□□□ -1.28
COL11A1-211ENST00000635193 ROMO1P60602 79 aa7.08□□□□□ -1.28
COL11A1-211ENST00000635193 A6NN06 94 aa7.08□□□□□ -1.28
COL11A1-211ENST00000635193 REV3LO60673 3130 aa7.08□□□□□ -1.28
COL11A1-211ENST00000635193 CAMK2N1Q7Z7J9 78 aa7.08□□□□□ -1.28
COL11A1-211ENST00000635193 PLAC8Q9NZF1 115 aa7.07□□□□□ -1.28
COL11A1-211ENST00000635193 NBEAL1Q6ZS30 2694 aa7.05□□□□□ -1.28
COL11A1-211ENST00000635193 UBR5O95071 2799 aaPredicted RBP7.05□□□□□ -1.28
COL11A1-211ENST00000635193 RPL37P61927 97 aaKnown RBP7.04□□□□□ -1.28
COL11A1-211ENST00000635193 Q6ZR54 194 aa7.03□□□□□ -1.28
COL11A1-211ENST00000635193 FRYQ5TBA9 3013 aa7.03□□□□□ -1.28
COL11A1-211ENST00000635193 KRTAP29-1A8MX34 341 aaPredicted RBP7.02□□□□□ -1.29
COL11A1-211ENST00000635193 SPEGQ15772 3267 aa7.02□□□□□ -1.29
COL11A1-211ENST00000635193 FRYLO94915 3013 aa7.02□□□□□ -1.29
COL11A1-211ENST00000635193 FLNCQ14315 2725 aa7.01□□□□□ -1.29
COL11A1-211ENST00000635193 SPATA8Q6RVD6 105 aa7□□□□□ -1.29
COL11A1-211ENST00000635193 BOD1L1Q8NFC6 3051 aa7□□□□□ -1.29
COL11A1-211ENST00000635193 DMXL2Q8TDJ6 3036 aa7□□□□□ -1.29
COL11A1-211ENST00000635193 H1FX-AS1Q4G0G2 97 aa7□□□□□ -1.29
COL11A1-211ENST00000635193 KRTAP16-1A8MUX0 517 aa6.99□□□□□ -1.29
COL11A1-211ENST00000635193 KRTAP4-16G5E9R7 235 aaPredicted RBP6.99□□□□□ -1.29
COL11A1-211ENST00000635193 S4R3F8 94 aa6.99□□□□□ -1.29
COL11A1-211ENST00000635193 FREM2Q5SZK8 3169 aa6.99□□□□□ -1.29
COL11A1-211ENST00000635193 KRTAP1-5Q9BYS1 174 aa6.98□□□□□ -1.29
COL11A1-211ENST00000635193 Q6ZSA8 131 aa6.96□□□□□ -1.29
COL11A1-211ENST00000635193 ATMQ13315 3056 aa6.95□□□□□ -1.3
COL11A1-211ENST00000635193 DMXL1Q9Y485 3027 aa6.94□□□□□ -1.3
COL11A1-211ENST00000635193 KRTAP25-1Q3LHN0 102 aa6.93□□□□□ -1.3
COL11A1-211ENST00000635193 LCE6AA0A183 80 aa6.92□□□□□ -1.3
COL11A1-211ENST00000635193 TACC2O95359 2948 aa6.92□□□□□ -1.3
COL11A1-211ENST00000635193 NSD1Q96L73 2696 aaPredicted RBP6.91□□□□□ -1.3
COL11A1-211ENST00000635193 ADM2Q7Z4H4 148 aa6.91□□□□□ -1.3
COL11A1-211ENST00000635193 A8MU10 97 aa6.91□□□□□ -1.3
COL11A1-211ENST00000635193 MYO15AQ9UKN7 3530 aa6.9□□□□□ -1.3
COL11A1-211ENST00000635193 COL12A1Q99715 3063 aa6.9□□□□□ -1.31
COL11A1-211ENST00000635193 R4GN34 69 aa6.88□□□□□ -1.31
COL11A1-211ENST00000635193 ITPR2Q14571 2701 aa6.87□□□□□ -1.31
COL11A1-211ENST00000635193 ITPR1Q14643 2758 aa6.86□□□□□ -1.31
COL11A1-211ENST00000635193 USP34Q70CQ2 3546 aa6.86□□□□□ -1.31
COL11A1-211ENST00000635193 ADGRG4Q8IZF6 3080 aa6.84□□□□□ -1.31
COL11A1-211ENST00000635193 FLG2Q5D862 2391 aaPredicted RBP6.84□□□□□ -1.31
COL11A1-211ENST00000635193 PANO1I0J062 215 aa6.83□□□□□ -1.32
COL11A1-211ENST00000635193 A0A087X002 238 aa6.81□□□□□ -1.32
COL11A1-211ENST00000635193 NOTCH2NLQ7Z3S9 236 aa6.81□□□□□ -1.32
COL11A1-211ENST00000635193 NDUFAF8A1L188 74 aa6.8□□□□□ -1.32
COL11A1-211ENST00000635193 NBEAL2Q6ZNJ1 2754 aa6.8□□□□□ -1.32
COL11A1-211ENST00000635193 ZZEF1O43149 2961 aa6.78□□□□□ -1.32
COL11A1-211ENST00000635193 STAB2Q8WWQ8 2551 aa6.78□□□□□ -1.32
COL11A1-211ENST00000635193 M0QZ58 72 aa6.77□□□□□ -1.33
COL11A1-211ENST00000635193 LOC400499M0QZD8 3231 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms