RNA–Protein interactions for RNA: ENST00000631006.2

SRGAP1-207, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SRGAP1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-207ENST00000631006 H7BZZ5 65 aa4.01□□□□□ -1.77
SRGAP1-207ENST00000631006 LCE6AA0A183 80 aa4□□□□□ -1.77
SRGAP1-207ENST00000631006 PLAC8Q9NZF1 115 aa4□□□□□ -1.77
SRGAP1-207ENST00000631006 CFAP54Q96N23 3096 aa4□□□□□ -1.77
SRGAP1-207ENST00000631006 NBEAL1Q6ZS30 2694 aa4□□□□□ -1.77
SRGAP1-207ENST00000631006 KRTAP1-1Q07627 177 aa4□□□□□ -1.77
SRGAP1-207ENST00000631006 SETXQ7Z333 2677 aaKnown RBP4□□□□□ -1.77
SRGAP1-207ENST00000631006 CHD6Q8TD26 2715 aa3.99□□□□□ -1.77
SRGAP1-207ENST00000631006 A0A0A0MQY5 61 aa3.99□□□□□ -1.77
SRGAP1-207ENST00000631006 XIRP2A4UGR9 3374 aa3.99□□□□□ -1.77
SRGAP1-207ENST00000631006 M0QZ58 72 aa3.97□□□□□ -1.77
SRGAP1-207ENST00000631006 H1FX-AS1Q4G0G2 97 aa3.97□□□□□ -1.77
SRGAP1-207ENST00000631006 SPINK7P58062 85 aa3.96□□□□□ -1.77
SRGAP1-207ENST00000631006 UNC79Q9P2D8 2635 aa3.95□□□□□ -1.78
SRGAP1-207ENST00000631006 COL6A5A8TX70 2615 aa3.95□□□□□ -1.78
SRGAP1-207ENST00000631006 LAMA2P24043 3122 aaKnown RBP3.95□□□□□ -1.78
SRGAP1-207ENST00000631006 TEP1Q99973 2627 aaKnown RBP3.95□□□□□ -1.78
SRGAP1-207ENST00000631006 ZNF292O60281 2723 aa3.94□□□□□ -1.78
SRGAP1-207ENST00000631006 Q75L30 129 aa3.93□□□□□ -1.78
SRGAP1-207ENST00000631006 ASB16-AS1Q495Z4 193 aa3.93□□□□□ -1.78
SRGAP1-207ENST00000631006 TRANK1O15050 2925 aa3.93□□□□□ -1.78
SRGAP1-207ENST00000631006 FP248Q71RG6 208 aaPredicted RBP3.92□□□□□ -1.78
SRGAP1-207ENST00000631006 A0A0C4DFX4 3053 aa3.91□□□□□ -1.78
SRGAP1-207ENST00000631006 Q5W150 140 aa3.91□□□□□ -1.78
SRGAP1-207ENST00000631006 Q8N9P0 234 aaPredicted RBP3.91□□□□□ -1.78
SRGAP1-207ENST00000631006 KRTAP10-1P60331 282 aa3.91□□□□□ -1.78
SRGAP1-207ENST00000631006 GCN1Q92616 2671 aaKnown RBP3.91□□□□□ -1.78
SRGAP1-207ENST00000631006 OCR1Q9BZK8 76 aa3.9□□□□□ -1.78
SRGAP1-207ENST00000631006 ADM2Q7Z4H4 148 aa3.9□□□□□ -1.78
SRGAP1-207ENST00000631006 BAHCC1Q9P281 2608 aa3.9□□□□□ -1.79
SRGAP1-207ENST00000631006 MMP24-AS1A0A0U1RRL7 71 aa3.89□□□□□ -1.79
SRGAP1-207ENST00000631006 KRTAP10-2P60368 255 aa3.88□□□□□ -1.79
SRGAP1-207ENST00000631006 NOTCH1P46531 2555 aa3.87□□□□□ -1.79
SRGAP1-207ENST00000631006 RPL37P61927 97 aaKnown RBP3.87□□□□□ -1.79
SRGAP1-207ENST00000631006 STAB2Q8WWQ8 2551 aa3.87□□□□□ -1.79
SRGAP1-207ENST00000631006 ROMO1P60602 79 aa3.87□□□□□ -1.79
SRGAP1-207ENST00000631006 MKI67P46013 3256 aaKnown RBP3.86□□□□□ -1.79
SRGAP1-207ENST00000631006 MAP1AP78559 2803 aaPredicted RBP3.85□□□□□ -1.79
SRGAP1-207ENST00000631006 ITPR2Q14571 2701 aa3.85□□□□□ -1.79
SRGAP1-207ENST00000631006 TRIOO75962 3097 aa3.85□□□□□ -1.79
SRGAP1-207ENST00000631006 CELSR3Q9NYQ7 3312 aa3.85□□□□□ -1.79
SRGAP1-207ENST00000631006 LINC01558Q9Y6Z2 57 aa3.84□□□□□ -1.79
SRGAP1-207ENST00000631006 PRUNE2Q8WUY3 3088 aa3.83□□□□□ -1.8
SRGAP1-207ENST00000631006 CRYBG3Q68DQ2 2970 aa3.83□□□□□ -1.8
SRGAP1-207ENST00000631006 MGAQ8IWI9 3026 aa3.82□□□□□ -1.8
SRGAP1-207ENST00000631006 REV3LO60673 3130 aa3.81□□□□□ -1.8
SRGAP1-207ENST00000631006 SPRR1BP22528 89 aa3.81□□□□□ -1.8
SRGAP1-207ENST00000631006 SPRR1AP35321 89 aa3.81□□□□□ -1.8
SRGAP1-207ENST00000631006 FREM2Q5SZK8 3169 aa3.81□□□□□ -1.8
SRGAP1-207ENST00000631006 KRTAP1-5Q9BYS1 174 aa3.81□□□□□ -1.8
SRGAP1-207ENST00000631006 FRYQ5TBA9 3013 aa3.8□□□□□ -1.8
SRGAP1-207ENST00000631006 LINC00472Q9H8W2 130 aa3.8□□□□□ -1.8
SRGAP1-207ENST00000631006 PRAC1Q96KF2 57 aa3.8□□□□□ -1.8
SRGAP1-207ENST00000631006 Q6ZR54 194 aa3.79□□□□□ -1.8
SRGAP1-207ENST00000631006 C20orf166-AS1Q96NR2 134 aa3.79□□□□□ -1.8
SRGAP1-207ENST00000631006 LAMA3Q16787 3333 aa3.79□□□□□ -1.8
SRGAP1-207ENST00000631006 CHD7Q9P2D1 2997 aa3.79□□□□□ -1.8
SRGAP1-207ENST00000631006 KRTAP26-1Q6PEX3 210 aa3.78□□□□□ -1.8
SRGAP1-207ENST00000631006 VPS13AQ96RL7 3174 aa3.78□□□□□ -1.8
SRGAP1-207ENST00000631006 SPATA8Q6RVD6 105 aa3.77□□□□□ -1.81
SRGAP1-207ENST00000631006 WDFY4Q6ZS81 3184 aa3.77□□□□□ -1.81
SRGAP1-207ENST00000631006 IGSF10Q6WRI0 2623 aa3.77□□□□□ -1.81
SRGAP1-207ENST00000631006 A0A087X002 238 aa3.76□□□□□ -1.81
SRGAP1-207ENST00000631006 PANO1I0J062 215 aa3.76□□□□□ -1.81
SRGAP1-207ENST00000631006 BRCA2P51587 3418 aa3.76□□□□□ -1.81
SRGAP1-207ENST00000631006 A8MUU9 505 aa3.76□□□□□ -1.81
SRGAP1-207ENST00000631006 CHD9Q3L8U1 2897 aa3.75□□□□□ -1.81
SRGAP1-207ENST00000631006 KRTAP16-1A8MUX0 517 aa3.75□□□□□ -1.81
SRGAP1-207ENST00000631006 NSD1Q96L73 2696 aaPredicted RBP3.75□□□□□ -1.81
SRGAP1-207ENST00000631006 Q5XG85 94 aa3.75□□□□□ -1.81
SRGAP1-207ENST00000631006 Q8NDZ9 215 aa3.74□□□□□ -1.81
SRGAP1-207ENST00000631006 NOTCH2NLQ7Z3S9 236 aa3.74□□□□□ -1.81
SRGAP1-207ENST00000631006 APCP25054 2843 aa3.73□□□□□ -1.81
SRGAP1-207ENST00000631006 UNC80Q8N2C7 3258 aa3.72□□□□□ -1.81
SRGAP1-207ENST00000631006 RANBP2P49792 3224 aaKnown RBP3.72□□□□□ -1.81
SRGAP1-207ENST00000631006 Q5VV11 94 aa3.72□□□□□ -1.81
SRGAP1-207ENST00000631006 DSPP15924 2871 aaKnown RBP3.72□□□□□ -1.81
SRGAP1-207ENST00000631006 RPS29P62273 56 aaKnown RBP3.7□□□□□ -1.82
SRGAP1-207ENST00000631006 DNAH14Q0VDD8 3507 aa3.7□□□□□ -1.82
SRGAP1-207ENST00000631006 NBEAL2Q6ZNJ1 2754 aa3.69□□□□□ -1.82
SRGAP1-207ENST00000631006 TNP1P09430 55 aa3.68□□□□□ -1.82
SRGAP1-207ENST00000631006 VCANP13611 3396 aa3.68□□□□□ -1.82
SRGAP1-207ENST00000631006 FRYLO94915 3013 aa3.68□□□□□ -1.82
SRGAP1-207ENST00000631006 HTTP42858 3142 aa3.67□□□□□ -1.82
SRGAP1-207ENST00000631006 CDH23Q9H251 3354 aa3.66□□□□□ -1.82
SRGAP1-207ENST00000631006 SPEGQ15772 3267 aa3.66□□□□□ -1.82
SRGAP1-207ENST00000631006 FLNCQ14315 2725 aa3.66□□□□□ -1.82
SRGAP1-207ENST00000631006 ASH1LQ9NR48 2969 aaKnown RBP3.65□□□□□ -1.82
SRGAP1-207ENST00000631006 DMXL2Q8TDJ6 3036 aa3.65□□□□□ -1.82
SRGAP1-207ENST00000631006 KALRNO60229 2985 aa3.64□□□□□ -1.83
SRGAP1-207ENST00000631006 UTP20O75691 2785 aaKnown RBP3.63□□□□□ -1.83
SRGAP1-207ENST00000631006 ITPR1Q14643 2758 aa3.63□□□□□ -1.83
SRGAP1-207ENST00000631006 USP34Q70CQ2 3546 aa3.63□□□□□ -1.83
SRGAP1-207ENST00000631006 LAMA1P25391 3075 aa3.63□□□□□ -1.83
SRGAP1-207ENST00000631006 COL6A3P12111 3177 aa3.62□□□□□ -1.83
SRGAP1-207ENST00000631006 C10orf95Q9H7T3 257 aa3.62□□□□□ -1.83
SRGAP1-207ENST00000631006 CFAP47Q6ZTR5 3102 aa3.62□□□□□ -1.83
SRGAP1-207ENST00000631006 KRTAP10-8P60410 259 aa3.62□□□□□ -1.83
SRGAP1-207ENST00000631006 KRTAP21-3Q3LHN1 58 aa3.62□□□□□ -1.83
SRGAP1-207ENST00000631006 LRBAP50851 2863 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms