RNA–Protein interactions for RNA: ENST00000630866.1

SPTAN1-223, Transcript of spectrin alpha, non-erythrocytic 1, human

TSL 5 BASIC

Gene SPTAN1, Length 7,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPTAN1-223	ENST00000630866		H3BS24	57 aa		5.47	□□□□□ -1.53
SPTAN1-223	ENST00000630866	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	5.47	□□□□□ -1.53
SPTAN1-223	ENST00000630866	KRTAP21-3	Q3LHN1	58 aa		5.46	□□□□□ -1.54
SPTAN1-223	ENST00000630866	MGA	Q8IWI9	3026 aa		5.45	□□□□□ -1.54
SPTAN1-223	ENST00000630866	SPANXA2-OT1	Q8N9U9	137 aa		5.44	□□□□□ -1.54
SPTAN1-223	ENST00000630866	COL6A5	A8TX70	2615 aa		5.44	□□□□□ -1.54
SPTAN1-223	ENST00000630866	HTT	P42858	3142 aa		5.44	□□□□□ -1.54
SPTAN1-223	ENST00000630866	CDH23	Q9H251	3354 aa		5.44	□□□□□ -1.54
SPTAN1-223	ENST00000630866	UNC80	Q8N2C7	3258 aa		5.44	□□□□□ -1.54
SPTAN1-223	ENST00000630866	EIF4EBP3	O60516	100 aa	Predicted RBP	5.44	□□□□□ -1.54
SPTAN1-223	ENST00000630866	KMT2B	Q9UMN6	2715 aa	Predicted RBP	5.44	□□□□□ -1.54
SPTAN1-223	ENST00000630866	ZNF292	O60281	2723 aa		5.43	□□□□□ -1.54
SPTAN1-223	ENST00000630866		A0A1B0GU33	70 aa		5.43	□□□□□ -1.54
SPTAN1-223	ENST00000630866	HRES1	P13985	223 aa		5.43	□□□□□ -1.54
SPTAN1-223	ENST00000630866	CHD6	Q8TD26	2715 aa		5.42	□□□□□ -1.54
SPTAN1-223	ENST00000630866		H7BZZ5	65 aa		5.41	□□□□□ -1.54
SPTAN1-223	ENST00000630866	FAM229B	Q4G0N7	80 aa		5.41	□□□□□ -1.54
SPTAN1-223	ENST00000630866	TNRC18	O15417	2968 aa	Predicted RBP	5.41	□□□□□ -1.54
SPTAN1-223	ENST00000630866	CHD9	Q3L8U1	2897 aa		5.41	□□□□□ -1.54
SPTAN1-223	ENST00000630866	DMAC1	Q96GE9	116 aa		5.41	□□□□□ -1.54
SPTAN1-223	ENST00000630866	SPINK7	P58062	85 aa		5.4	□□□□□ -1.54
SPTAN1-223	ENST00000630866	PLAC8	Q9NZF1	115 aa		5.4	□□□□□ -1.54
SPTAN1-223	ENST00000630866	SEC61B	P60468	96 aa	Known RBP	5.4	□□□□□ -1.55
SPTAN1-223	ENST00000630866	OXT	P01178	125 aa		5.4	□□□□□ -1.55
SPTAN1-223	ENST00000630866	VCAN	P13611	3396 aa		5.39	□□□□□ -1.55
SPTAN1-223	ENST00000630866	UNC79	Q9P2D8	2635 aa		5.39	□□□□□ -1.55
SPTAN1-223	ENST00000630866	CFAP54	Q96N23	3096 aa		5.39	□□□□□ -1.55
SPTAN1-223	ENST00000630866		A0A1W2PNM2	257 aa		5.36	□□□□□ -1.55
SPTAN1-223	ENST00000630866	TRANK1	O15050	2925 aa		5.36	□□□□□ -1.55
SPTAN1-223	ENST00000630866	TRIO	O75962	3097 aa		5.35	□□□□□ -1.55
SPTAN1-223	ENST00000630866	WDFY4	Q6ZS81	3184 aa		5.35	□□□□□ -1.55
SPTAN1-223	ENST00000630866	NBEAL1	Q6ZS30	2694 aa		5.34	□□□□□ -1.55
SPTAN1-223	ENST00000630866	DSP	P15924	2871 aa	Known RBP	5.34	□□□□□ -1.55
SPTAN1-223	ENST00000630866	H1FX-AS1	Q4G0G2	97 aa		5.34	□□□□□ -1.56
SPTAN1-223	ENST00000630866	ITPR2	Q14571	2701 aa		5.34	□□□□□ -1.56
SPTAN1-223	ENST00000630866	CSAG1	Q6PB30	78 aa		5.32	□□□□□ -1.56
SPTAN1-223	ENST00000630866	IGSF10	Q6WRI0	2623 aa		5.31	□□□□□ -1.56
SPTAN1-223	ENST00000630866	KRTAP10-1	P60331	282 aa		5.31	□□□□□ -1.56
SPTAN1-223	ENST00000630866	DMBT1	Q9UGM3	2413 aa	Predicted RBP	5.3	□□□□□ -1.56
SPTAN1-223	ENST00000630866		S4R3F8	94 aa		5.3	□□□□□ -1.56
SPTAN1-223	ENST00000630866		Q75L30	129 aa		5.3	□□□□□ -1.56
SPTAN1-223	ENST00000630866		R4GN34	69 aa		5.3	□□□□□ -1.56
SPTAN1-223	ENST00000630866	NOTCH1	P46531	2555 aa		5.29	□□□□□ -1.56
SPTAN1-223	ENST00000630866	KRTAP10-2	P60368	255 aa		5.29	□□□□□ -1.56
SPTAN1-223	ENST00000630866	GCN1	Q92616	2671 aa	Known RBP	5.29	□□□□□ -1.56
SPTAN1-223	ENST00000630866	KRTAP1-5	Q9BYS1	174 aa		5.29	□□□□□ -1.56
SPTAN1-223	ENST00000630866	PRAC1	Q96KF2	57 aa		5.27	□□□□□ -1.57
SPTAN1-223	ENST00000630866	VPS13A	Q96RL7	3174 aa		5.27	□□□□□ -1.57
SPTAN1-223	ENST00000630866	EYS	Q5T1H1	3165 aa		5.26	□□□□□ -1.57
SPTAN1-223	ENST00000630866	ZCCHC13	Q8WW36	166 aa	Known RBP	5.26	□□□□□ -1.57
SPTAN1-223	ENST00000630866	MAP1A	P78559	2803 aa	Predicted RBP	5.24	□□□□□ -1.57
SPTAN1-223	ENST00000630866	FRY	Q5TBA9	3013 aa		5.23	□□□□□ -1.57
SPTAN1-223	ENST00000630866		Q8N9P0	234 aa	Predicted RBP	5.23	□□□□□ -1.57
SPTAN1-223	ENST00000630866	KRTAP16-1	A8MUX0	517 aa		5.23	□□□□□ -1.57
SPTAN1-223	ENST00000630866	LINC01558	Q9Y6Z2	57 aa		5.22	□□□□□ -1.57
SPTAN1-223	ENST00000630866	ROMO1	P60602	79 aa		5.22	□□□□□ -1.57
SPTAN1-223	ENST00000630866	FRYL	O94915	3013 aa		5.22	□□□□□ -1.57
SPTAN1-223	ENST00000630866	SPRR1A	P35321	89 aa		5.21	□□□□□ -1.58
SPTAN1-223	ENST00000630866	OCR1	Q9BZK8	76 aa		5.2	□□□□□ -1.58
SPTAN1-223	ENST00000630866	UBR5	O95071	2799 aa	Predicted RBP	5.2	□□□□□ -1.58
SPTAN1-223	ENST00000630866	STAB2	Q8WWQ8	2551 aa		5.19	□□□□□ -1.58
SPTAN1-223	ENST00000630866	RPL37	P61927	97 aa	Known RBP	5.19	□□□□□ -1.58
SPTAN1-223	ENST00000630866		Q6ZR54	194 aa		5.19	□□□□□ -1.58
SPTAN1-223	ENST00000630866	FP248	Q71RG6	208 aa	Predicted RBP	5.19	□□□□□ -1.58
SPTAN1-223	ENST00000630866	SPRR1B	P22528	89 aa		5.16	□□□□□ -1.58
SPTAN1-223	ENST00000630866	NSD1	Q96L73	2696 aa	Predicted RBP	5.15	□□□□□ -1.58
SPTAN1-223	ENST00000630866		M0QZ58	72 aa		5.15	□□□□□ -1.59
SPTAN1-223	ENST00000630866	KRTAP26-1	Q6PEX3	210 aa		5.14	□□□□□ -1.59
SPTAN1-223	ENST00000630866	MMP24-AS1	A0A0U1RRL7	71 aa		5.14	□□□□□ -1.59
SPTAN1-223	ENST00000630866		Q8NDZ9	215 aa		5.14	□□□□□ -1.59
SPTAN1-223	ENST00000630866	REV3L	O60673	3130 aa		5.13	□□□□□ -1.59
SPTAN1-223	ENST00000630866	CELSR3	Q9NYQ7	3312 aa		5.13	□□□□□ -1.59
SPTAN1-223	ENST00000630866	NBEAL2	Q6ZNJ1	2754 aa		5.12	□□□□□ -1.59
SPTAN1-223	ENST00000630866	CRYBG3	Q68DQ2	2970 aa		5.12	□□□□□ -1.59
SPTAN1-223	ENST00000630866		Q5W150	140 aa		5.11	□□□□□ -1.59
SPTAN1-223	ENST00000630866	SPTBN5	Q9NRC6	3674 aa	Known RBP	5.11	□□□□□ -1.59
SPTAN1-223	ENST00000630866		Q5XG85	94 aa		5.11	□□□□□ -1.59
SPTAN1-223	ENST00000630866	C20orf166-AS1	Q96NR2	134 aa		5.11	□□□□□ -1.59
SPTAN1-223	ENST00000630866	LAMA1	P25391	3075 aa		5.1	□□□□□ -1.59
SPTAN1-223	ENST00000630866		Q5VV11	94 aa		5.1	□□□□□ -1.59
SPTAN1-223	ENST00000630866	LINC00472	Q9H8W2	130 aa		5.1	□□□□□ -1.59
SPTAN1-223	ENST00000630866	PANO1	I0J062	215 aa		5.1	□□□□□ -1.59
SPTAN1-223	ENST00000630866	USP34	Q70CQ2	3546 aa		5.09	□□□□□ -1.59
SPTAN1-223	ENST00000630866	ITPR1	Q14643	2758 aa		5.09	□□□□□ -1.59
SPTAN1-223	ENST00000630866		P0C880	135 aa		5.07	□□□□□ -1.6
SPTAN1-223	ENST00000630866		A0A087X002	238 aa		5.06	□□□□□ -1.6
SPTAN1-223	ENST00000630866	FREM2	Q5SZK8	3169 aa		5.06	□□□□□ -1.6
SPTAN1-223	ENST00000630866	DMXL1	Q9Y485	3027 aa		5.05	□□□□□ -1.6
SPTAN1-223	ENST00000630866	DNAH14	Q0VDD8	3507 aa		5.04	□□□□□ -1.6
SPTAN1-223	ENST00000630866	TACC2	O95359	2948 aa		5.04	□□□□□ -1.6
SPTAN1-223	ENST00000630866	COL12A1	Q99715	3063 aa		5.04	□□□□□ -1.6
SPTAN1-223	ENST00000630866	ADM2	Q7Z4H4	148 aa		5.03	□□□□□ -1.6
SPTAN1-223	ENST00000630866	HIVEP1	P15822	2718 aa		5.03	□□□□□ -1.6
SPTAN1-223	ENST00000630866	FLNC	Q14315	2725 aa		5.03	□□□□□ -1.6
SPTAN1-223	ENST00000630866	DMXL2	Q8TDJ6	3036 aa		5.02	□□□□□ -1.61
SPTAN1-223	ENST00000630866	UTP20	O75691	2785 aa	Known RBP	5.02	□□□□□ -1.61
SPTAN1-223	ENST00000630866	ASB16-AS1	Q495Z4	193 aa		5.02	□□□□□ -1.61
SPTAN1-223	ENST00000630866		Q6ZRN7	208 aa	Predicted RBP	5.01	□□□□□ -1.61
SPTAN1-223	ENST00000630866	TENM4	Q6N022	2769 aa		5.01	□□□□□ -1.61
SPTAN1-223	ENST00000630866	CFAP47	Q6ZTR5	3102 aa		5.01	□□□□□ -1.61

Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms