RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 TRIOO75962 3097 aa7.21□□□□□ -1.26
SHPRH-211ENST00000629427 Q5VSD8 79 aa7.2□□□□□ -1.26
SHPRH-211ENST00000629427 DMAC1Q96GE9 116 aa7.2□□□□□ -1.26
SHPRH-211ENST00000629427 PRUNE2Q8WUY3 3088 aa7.2□□□□□ -1.26
SHPRH-211ENST00000629427 R4GN34 69 aa7.19□□□□□ -1.26
SHPRH-211ENST00000629427 SEC61BP60468 96 aaKnown RBP7.19□□□□□ -1.26
SHPRH-211ENST00000629427 Q8N9P0 234 aaPredicted RBP7.18□□□□□ -1.26
SHPRH-211ENST00000629427 MGAQ8IWI9 3026 aa7.18□□□□□ -1.26
SHPRH-211ENST00000629427 MMP24-AS1A0A0U1RRL7 71 aa7.17□□□□□ -1.26
SHPRH-211ENST00000629427 LAMA3Q16787 3333 aa7.17□□□□□ -1.26
SHPRH-211ENST00000629427 SPINK7P58062 85 aa7.16□□□□□ -1.26
SHPRH-211ENST00000629427 CENPEQ02224 2701 aa7.15□□□□□ -1.26
SHPRH-211ENST00000629427 WIPF1O43516 503 aa7.15□□□□□ -1.26
SHPRH-211ENST00000629427 Q75L30 129 aa7.15□□□□□ -1.27
SHPRH-211ENST00000629427 Q5W150 140 aa7.14□□□□□ -1.27
SHPRH-211ENST00000629427 BRCA2P51587 3418 aa7.13□□□□□ -1.27
SHPRH-211ENST00000629427 NBEAL1Q6ZS30 2694 aa7.13□□□□□ -1.27
SHPRH-211ENST00000629427 STAB1Q9NY15 2570 aa7.13□□□□□ -1.27
SHPRH-211ENST00000629427 Q8NDZ9 215 aa7.11□□□□□ -1.27
SHPRH-211ENST00000629427 SPRR1AP35321 89 aa7.1□□□□□ -1.27
SHPRH-211ENST00000629427 FREM2Q5SZK8 3169 aa7.08□□□□□ -1.28
SHPRH-211ENST00000629427 WDFY4Q6ZS81 3184 aa7.08□□□□□ -1.28
SHPRH-211ENST00000629427 KRTAP10-1P60331 282 aa7.08□□□□□ -1.28
SHPRH-211ENST00000629427 LINC00472Q9H8W2 130 aa7.07□□□□□ -1.28
SHPRH-211ENST00000629427 RANBP2P49792 3224 aaKnown RBP7.07□□□□□ -1.28
SHPRH-211ENST00000629427 LINC01558Q9Y6Z2 57 aa7.07□□□□□ -1.28
SHPRH-211ENST00000629427 VPS13AQ96RL7 3174 aa7.07□□□□□ -1.28
SHPRH-211ENST00000629427 KRTAP10-2P60368 255 aa7.07□□□□□ -1.28
SHPRH-211ENST00000629427 KRTAP1-5Q9BYS1 174 aa7.07□□□□□ -1.28
SHPRH-211ENST00000629427 REV3LO60673 3130 aa7.06□□□□□ -1.28
SHPRH-211ENST00000629427 LCE6AA0A183 80 aa7.06□□□□□ -1.28
SHPRH-211ENST00000629427 UNC79Q9P2D8 2635 aa7.04□□□□□ -1.28
SHPRH-211ENST00000629427 M0QZ58 72 aa7.03□□□□□ -1.28
SHPRH-211ENST00000629427 DNAH14Q0VDD8 3507 aa7.03□□□□□ -1.28
SHPRH-211ENST00000629427 PLAC4Q8WY50 150 aa7.03□□□□□ -1.28
SHPRH-211ENST00000629427 DMBT1Q9UGM3 2413 aaPredicted RBP7.02□□□□□ -1.29
SHPRH-211ENST00000629427 SPRR1BP22528 89 aa7.01□□□□□ -1.29
SHPRH-211ENST00000629427 CDH23Q9H251 3354 aa7.01□□□□□ -1.29
SHPRH-211ENST00000629427 TEP1Q99973 2627 aaKnown RBP7.01□□□□□ -1.29
SHPRH-211ENST00000629427 HTTP42858 3142 aa7□□□□□ -1.29
SHPRH-211ENST00000629427 PRAC1Q96KF2 57 aa7□□□□□ -1.29
SHPRH-211ENST00000629427 UNC80Q8N2C7 3258 aa7□□□□□ -1.29
SHPRH-211ENST00000629427 COL6A5A8TX70 2615 aa6.99□□□□□ -1.29
SHPRH-211ENST00000629427 KRTAP26-1Q6PEX3 210 aa6.98□□□□□ -1.29
SHPRH-211ENST00000629427 RPL37P61927 97 aaKnown RBP6.98□□□□□ -1.29
SHPRH-211ENST00000629427 OXTP01178 125 aa6.97□□□□□ -1.29
SHPRH-211ENST00000629427 ADM2Q7Z4H4 148 aa6.97□□□□□ -1.29
SHPRH-211ENST00000629427 FRYQ5TBA9 3013 aa6.97□□□□□ -1.29
SHPRH-211ENST00000629427 Q5VV11 94 aa6.96□□□□□ -1.29
SHPRH-211ENST00000629427 A0A0A0MQY5 61 aa6.96□□□□□ -1.3
SHPRH-211ENST00000629427 ROMO1P60602 79 aa6.96□□□□□ -1.3
SHPRH-211ENST00000629427 KMT2BQ9UMN6 2715 aaPredicted RBP6.94□□□□□ -1.3
SHPRH-211ENST00000629427 FP248Q71RG6 208 aaPredicted RBP6.94□□□□□ -1.3
SHPRH-211ENST00000629427 GCN1Q92616 2671 aaKnown RBP6.94□□□□□ -1.3
SHPRH-211ENST00000629427 H1FX-AS1Q4G0G2 97 aa6.94□□□□□ -1.3
SHPRH-211ENST00000629427 CYSTM1Q9H1C7 97 aa6.93□□□□□ -1.3
SHPRH-211ENST00000629427 TRANK1O15050 2925 aa6.92□□□□□ -1.3
SHPRH-211ENST00000629427 ITPR2Q14571 2701 aa6.92□□□□□ -1.3
SHPRH-211ENST00000629427 SETXQ7Z333 2677 aaKnown RBP6.91□□□□□ -1.3
SHPRH-211ENST00000629427 Q6ZR54 194 aa6.9□□□□□ -1.3
SHPRH-211ENST00000629427 CHD9Q3L8U1 2897 aa6.9□□□□□ -1.3
SHPRH-211ENST00000629427 Q5XG85 94 aa6.9□□□□□ -1.3
SHPRH-211ENST00000629427 MAP1AP78559 2803 aaPredicted RBP6.9□□□□□ -1.31
SHPRH-211ENST00000629427 COL6A3P12111 3177 aa6.89□□□□□ -1.31
SHPRH-211ENST00000629427 A0A087X002 238 aa6.88□□□□□ -1.31
SHPRH-211ENST00000629427 PANO1I0J062 215 aa6.88□□□□□ -1.31
SHPRH-211ENST00000629427 SPATA8Q6RVD6 105 aa6.88□□□□□ -1.31
SHPRH-211ENST00000629427 NOTCH1P46531 2555 aa6.86□□□□□ -1.31
SHPRH-211ENST00000629427 BAHCC1Q9P281 2608 aa6.86□□□□□ -1.31
SHPRH-211ENST00000629427 KALRNO60229 2985 aa6.85□□□□□ -1.31
SHPRH-211ENST00000629427 NBEAL2Q6ZNJ1 2754 aa6.85□□□□□ -1.31
SHPRH-211ENST00000629427 LAMA1P25391 3075 aa6.84□□□□□ -1.31
SHPRH-211ENST00000629427 CRYBG3Q68DQ2 2970 aa6.82□□□□□ -1.32
SHPRH-211ENST00000629427 SZT2Q5T011 3432 aa6.81□□□□□ -1.32
SHPRH-211ENST00000629427 H3BS24 57 aa6.81□□□□□ -1.32
SHPRH-211ENST00000629427 ZNF292O60281 2723 aa6.81□□□□□ -1.32
SHPRH-211ENST00000629427 DSPP15924 2871 aaKnown RBP6.81□□□□□ -1.32
SHPRH-211ENST00000629427 STAB2Q8WWQ8 2551 aa6.79□□□□□ -1.32
SHPRH-211ENST00000629427 KRTAP4-16G5E9R7 235 aaPredicted RBP6.78□□□□□ -1.32
SHPRH-211ENST00000629427 SPEGQ15772 3267 aa6.78□□□□□ -1.32
SHPRH-211ENST00000629427 VCANP13611 3396 aa6.78□□□□□ -1.32
SHPRH-211ENST00000629427 APCP25054 2843 aa6.77□□□□□ -1.33
SHPRH-211ENST00000629427 CFAP47Q6ZTR5 3102 aa6.76□□□□□ -1.33
SHPRH-211ENST00000629427 LRBAP50851 2863 aa6.76□□□□□ -1.33
SHPRH-211ENST00000629427 A8MUU9 505 aa6.74□□□□□ -1.33
SHPRH-211ENST00000629427 NOTCH2NLQ7Z3S9 236 aa6.74□□□□□ -1.33
SHPRH-211ENST00000629427 DMXL2Q8TDJ6 3036 aa6.71□□□□□ -1.33
SHPRH-211ENST00000629427 KRTAP29-1A8MX34 341 aaPredicted RBP6.7□□□□□ -1.34
SHPRH-211ENST00000629427 FRYLO94915 3013 aa6.7□□□□□ -1.34
SHPRH-211ENST00000629427 USP34Q70CQ2 3546 aa6.69□□□□□ -1.34
SHPRH-211ENST00000629427 KRTAP11-1Q8IUC1 163 aa6.69□□□□□ -1.34
SHPRH-211ENST00000629427 C20orf166-AS1Q96NR2 134 aa6.68□□□□□ -1.34
SHPRH-211ENST00000629427 RPS29P62273 56 aaKnown RBP6.67□□□□□ -1.34
SHPRH-211ENST00000629427 ASB16-AS1Q495Z4 193 aa6.67□□□□□ -1.34
SHPRH-211ENST00000629427 ASH1LQ9NR48 2969 aaKnown RBP6.67□□□□□ -1.34
SHPRH-211ENST00000629427 BOD1L1Q8NFC6 3051 aa6.65□□□□□ -1.34
SHPRH-211ENST00000629427 A8MU10 97 aa6.64□□□□□ -1.35
SHPRH-211ENST00000629427 IGSF10Q6WRI0 2623 aa6.63□□□□□ -1.35
SHPRH-211ENST00000629427 UBR5O95071 2799 aaPredicted RBP6.63□□□□□ -1.35
SHPRH-211ENST00000629427 NSD1Q96L73 2696 aaPredicted RBP6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms