RNA–Protein interactions for RNA: ENST00000626874.2

CHD2-208, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene CHD2, Length 7,764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-208ENST00000626874 H1FX-AS1Q4G0G2 97 aa4.23□□□□□ -1.73
CHD2-208ENST00000626874 M0QZ58 72 aa4.23□□□□□ -1.73
CHD2-208ENST00000626874 CENPFP49454 3210 aa4.22□□□□□ -1.73
CHD2-208ENST00000626874 SPRR1AP35321 89 aa4.22□□□□□ -1.73
CHD2-208ENST00000626874 LINC01558Q9Y6Z2 57 aa4.22□□□□□ -1.73
CHD2-208ENST00000626874 ROMO1P60602 79 aa4.21□□□□□ -1.74
CHD2-208ENST00000626874 Q5W150 140 aa4.21□□□□□ -1.74
CHD2-208ENST00000626874 CENPEQ02224 2701 aa4.2□□□□□ -1.74
CHD2-208ENST00000626874 MMP24-AS1A0A0U1RRL7 71 aa4.2□□□□□ -1.74
CHD2-208ENST00000626874 RPS29P62273 56 aaKnown RBP4.2□□□□□ -1.74
CHD2-208ENST00000626874 UNC79Q9P2D8 2635 aa4.2□□□□□ -1.74
CHD2-208ENST00000626874 SETXQ7Z333 2677 aaKnown RBP4.2□□□□□ -1.74
CHD2-208ENST00000626874 TEX15Q9BXT5 2789 aa4.2□□□□□ -1.74
CHD2-208ENST00000626874 EIF4EBP3O60516 100 aaPredicted RBP4.19□□□□□ -1.74
CHD2-208ENST00000626874 Q8N9P0 234 aaPredicted RBP4.17□□□□□ -1.74
CHD2-208ENST00000626874 TEP1Q99973 2627 aaKnown RBP4.17□□□□□ -1.74
CHD2-208ENST00000626874 LINC00472Q9H8W2 130 aa4.17□□□□□ -1.74
CHD2-208ENST00000626874 ASB16-AS1Q495Z4 193 aa4.17□□□□□ -1.74
CHD2-208ENST00000626874 STAB2Q8WWQ8 2551 aa4.16□□□□□ -1.74
CHD2-208ENST00000626874 KRTAP21-3Q3LHN1 58 aa4.14□□□□□ -1.75
CHD2-208ENST00000626874 ADM2Q7Z4H4 148 aa4.13□□□□□ -1.75
CHD2-208ENST00000626874 BAHCC1Q9P281 2608 aa4.13□□□□□ -1.75
CHD2-208ENST00000626874 PANO1I0J062 215 aa4.12□□□□□ -1.75
CHD2-208ENST00000626874 KRTAP10-1P60331 282 aa4.12□□□□□ -1.75
CHD2-208ENST00000626874 NOTCH1P46531 2555 aa4.12□□□□□ -1.75
CHD2-208ENST00000626874 SRCAPQ6ZRS2 3230 aa4.11□□□□□ -1.75
CHD2-208ENST00000626874 CHD6Q8TD26 2715 aa4.09□□□□□ -1.75
CHD2-208ENST00000626874 COL6A5A8TX70 2615 aa4.09□□□□□ -1.75
CHD2-208ENST00000626874 Q6ZR54 194 aa4.08□□□□□ -1.76
CHD2-208ENST00000626874 ITPR2Q14571 2701 aa4.07□□□□□ -1.76
CHD2-208ENST00000626874 KRTAP10-2P60368 255 aa4.06□□□□□ -1.76
CHD2-208ENST00000626874 KRTAP26-1Q6PEX3 210 aa4.06□□□□□ -1.76
CHD2-208ENST00000626874 A8MUU9 505 aa4.05□□□□□ -1.76
CHD2-208ENST00000626874 Q5XG85 94 aa4.03□□□□□ -1.76
CHD2-208ENST00000626874 TNP1P09430 55 aa4.03□□□□□ -1.76
CHD2-208ENST00000626874 C20orf166-AS1Q96NR2 134 aa4.03□□□□□ -1.76
CHD2-208ENST00000626874 NSD1Q96L73 2696 aaPredicted RBP4.02□□□□□ -1.77
CHD2-208ENST00000626874 Q5VV11 94 aa4.02□□□□□ -1.77
CHD2-208ENST00000626874 KRTAP1-5Q9BYS1 174 aa4.02□□□□□ -1.77
CHD2-208ENST00000626874 Q8NDZ9 215 aa3.99□□□□□ -1.77
CHD2-208ENST00000626874 ZNF292O60281 2723 aa3.99□□□□□ -1.77
CHD2-208ENST00000626874 IGSF10Q6WRI0 2623 aa3.99□□□□□ -1.77
CHD2-208ENST00000626874 GCN1Q92616 2671 aaKnown RBP3.98□□□□□ -1.77
CHD2-208ENST00000626874 SPATA8Q6RVD6 105 aa3.97□□□□□ -1.77
CHD2-208ENST00000626874 PP632Q6XCG6 107 aa3.97□□□□□ -1.77
CHD2-208ENST00000626874 MAP1AP78559 2803 aaPredicted RBP3.96□□□□□ -1.77
CHD2-208ENST00000626874 PRO2289Q9P1D8 64 aa3.96□□□□□ -1.77
CHD2-208ENST00000626874 GOLGB1Q14789 3259 aaKnown RBP3.96□□□□□ -1.78
CHD2-208ENST00000626874 A0A087X002 238 aa3.96□□□□□ -1.78
CHD2-208ENST00000626874 KRTAP4-16G5E9R7 235 aaPredicted RBP3.95□□□□□ -1.78
CHD2-208ENST00000626874 KRTAP16-1A8MUX0 517 aa3.94□□□□□ -1.78
CHD2-208ENST00000626874 PRAC1Q96KF2 57 aa3.93□□□□□ -1.78
CHD2-208ENST00000626874 H3BS24 57 aa3.93□□□□□ -1.78
CHD2-208ENST00000626874 NOTCH2NLQ7Z3S9 236 aa3.93□□□□□ -1.78
CHD2-208ENST00000626874 KRTAP29-1A8MX34 341 aaPredicted RBP3.91□□□□□ -1.78
CHD2-208ENST00000626874 Q6ZRN7 208 aaPredicted RBP3.9□□□□□ -1.78
CHD2-208ENST00000626874 CEP350Q5VT06 3117 aa3.89□□□□□ -1.79
CHD2-208ENST00000626874 UTRNP46939 3433 aa3.87□□□□□ -1.79
CHD2-208ENST00000626874 KRTAP25-1Q3LHN0 102 aa3.87□□□□□ -1.79
CHD2-208ENST00000626874 KRTAP10-8P60410 259 aa3.83□□□□□ -1.8
CHD2-208ENST00000626874 TPRXLQ17RH7 258 aa3.82□□□□□ -1.8
CHD2-208ENST00000626874 APCP25054 2843 aa3.82□□□□□ -1.8
CHD2-208ENST00000626874 C5orf42Q9H799 3197 aa3.81□□□□□ -1.8
CHD2-208ENST00000626874 C10orf95Q9H7T3 257 aa3.81□□□□□ -1.8
CHD2-208ENST00000626874 KRTAP13-2Q52LG2 175 aa3.8□□□□□ -1.8
CHD2-208ENST00000626874 P0C880 135 aa3.79□□□□□ -1.8
CHD2-208ENST00000626874 KRTAP13-1Q8IUC0 172 aa3.79□□□□□ -1.8
CHD2-208ENST00000626874 UBR5O95071 2799 aaPredicted RBP3.79□□□□□ -1.8
CHD2-208ENST00000626874 KRTAP10-10P60014 251 aa3.75□□□□□ -1.81
CHD2-208ENST00000626874 NBEAL2Q6ZNJ1 2754 aa3.75□□□□□ -1.81
CHD2-208ENST00000626874 UTP20O75691 2785 aaKnown RBP3.74□□□□□ -1.81
CHD2-208ENST00000626874 A8MU10 97 aa3.74□□□□□ -1.81
CHD2-208ENST00000626874 FLNCQ14315 2725 aa3.73□□□□□ -1.81
CHD2-208ENST00000626874 CYSTM1Q9H1C7 97 aa3.73□□□□□ -1.81
CHD2-208ENST00000626874 PCNTO95613 3336 aa3.73□□□□□ -1.81
CHD2-208ENST00000626874 XP32Q5T750 250 aa3.73□□□□□ -1.81
CHD2-208ENST00000626874 DNAH12Q6ZR08 3092 aa3.71□□□□□ -1.82
CHD2-208ENST00000626874 KRTAP11-1Q8IUC1 163 aa3.7□□□□□ -1.82
CHD2-208ENST00000626874 A6NN06 94 aa3.7□□□□□ -1.82
CHD2-208ENST00000626874 NDUFAF8A1L188 74 aa3.7□□□□□ -1.82
CHD2-208ENST00000626874 MGAQ8IWI9 3026 aa3.68□□□□□ -1.82
CHD2-208ENST00000626874 TENM1Q9UKZ4 2725 aa3.67□□□□□ -1.82
CHD2-208ENST00000626874 FRYQ5TBA9 3013 aa3.67□□□□□ -1.82
CHD2-208ENST00000626874 ITPR1Q14643 2758 aa3.67□□□□□ -1.82
CHD2-208ENST00000626874 A0A0C4DFX4 3053 aa3.67□□□□□ -1.82
CHD2-208ENST00000626874 HIVEP1P15822 2718 aa3.66□□□□□ -1.82
CHD2-208ENST00000626874 TENM4Q6N022 2769 aa3.65□□□□□ -1.83
CHD2-208ENST00000626874 TENM3Q9P273 2699 aa3.64□□□□□ -1.83
CHD2-208ENST00000626874 DSPP15924 2871 aaKnown RBP3.64□□□□□ -1.83
CHD2-208ENST00000626874 RANBP2P49792 3224 aaKnown RBP3.63□□□□□ -1.83
CHD2-208ENST00000626874 KRTAP7-1Q8IUC3 87 aa3.63□□□□□ -1.83
CHD2-208ENST00000626874 A0A1B0GVY2 172 aa3.63□□□□□ -1.83
CHD2-208ENST00000626874 CHD9Q3L8U1 2897 aa3.62□□□□□ -1.83
CHD2-208ENST00000626874 HTTP42858 3142 aa3.61□□□□□ -1.83
CHD2-208ENST00000626874 KRTAP1-4P0C5Y4 121 aa3.6□□□□□ -1.83
CHD2-208ENST00000626874 NIPBLQ6KC79 2804 aaeCLIP3.6□□□□□ -1.833e-7■□□□□ 10
CHD2-208ENST00000626874 KRTAP13-3Q3SY46 172 aa3.6□□□□□ -1.83
CHD2-208ENST00000626874 CRYBG3Q68DQ2 2970 aa3.59□□□□□ -1.83
CHD2-208ENST00000626874 CFAP54Q96N23 3096 aa3.59□□□□□ -1.83
CHD2-208ENST00000626874 TRANK1O15050 2925 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms