RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.06□□□□□ -1.12
SNRPA1-216ENST00000626000 PRO1933Q9H354 126 aa8.06□□□□□ -1.12
SNRPA1-216ENST00000626000 F8WEM9 126 aa8.05□□□□□ -1.12
SNRPA1-216ENST00000626000 SMIM6P0DI80 62 aa8.05□□□□□ -1.12
SNRPA1-216ENST00000626000 LIMD2Q9BT23 127 aa8.05□□□□□ -1.12
SNRPA1-216ENST00000626000 H7C2G1 150 aa8.04□□□□□ -1.12
SNRPA1-216ENST00000626000 CD164Q04900 197 aa8.04□□□□□ -1.12
SNRPA1-216ENST00000626000 OCIAD2Q56VL3 154 aa8.04□□□□□ -1.12
SNRPA1-216ENST00000626000 Q6ZQY7 126 aa8.03□□□□□ -1.12
SNRPA1-216ENST00000626000 A0A1B0GX51 115 aa8.02□□□□□ -1.13
SNRPA1-216ENST00000626000 FXYD2P54710 66 aa8.02□□□□□ -1.13
SNRPA1-216ENST00000626000 LINC01547P58512 204 aaPredicted RBP8.02□□□□□ -1.13
SNRPA1-216ENST00000626000 Q8N377 158 aa8.01□□□□□ -1.13
SNRPA1-216ENST00000626000 IGLV7-46A0A075B6I9 117 aa8□□□□□ -1.13
SNRPA1-216ENST00000626000 COX6CP09669 75 aa8□□□□□ -1.13
SNRPA1-216ENST00000626000 TPRXLQ17RH7 258 aa8□□□□□ -1.13
SNRPA1-216ENST00000626000 SMIM29Q86T20 159 aa8□□□□□ -1.13
SNRPA1-216ENST00000626000 Q6JHZ5 121 aa7.99□□□□□ -1.13
SNRPA1-216ENST00000626000 RETNLBQ9BQ08 111 aa7.99□□□□□ -1.13
SNRPA1-216ENST00000626000 LRP2P98164 4655 aa7.98□□□□□ -1.13
SNRPA1-216ENST00000626000 XP32Q5T750 250 aa7.98□□□□□ -1.13
SNRPA1-216ENST00000626000 H3BQ85 93 aa7.97□□□□□ -1.13
SNRPA1-216ENST00000626000 SNHG12Q9BXW3 62 aa7.97□□□□□ -1.13
SNRPA1-216ENST00000626000 M0R143 59 aa7.96□□□□□ -1.14
SNRPA1-216ENST00000626000 PSMB2P49721 201 aa7.96□□□□□ -1.14
SNRPA1-216ENST00000626000 Q5XG85 94 aa7.95□□□□□ -1.14
SNRPA1-216ENST00000626000 IGLV8-61A0A075B6I0 122 aa7.94□□□□□ -1.14
SNRPA1-216ENST00000626000 DNAL4O96015 105 aa7.94□□□□□ -1.14
SNRPA1-216ENST00000626000 CDIP1Q9H305 208 aa7.94□□□□□ -1.14
SNRPA1-216ENST00000626000 TSTD3H0UI37 97 aa7.93□□□□□ -1.14
SNRPA1-216ENST00000626000 TRIAP1O43715 76 aa7.93□□□□□ -1.14
SNRPA1-216ENST00000626000 CLEC2BQ92478 149 aa7.93□□□□□ -1.14
SNRPA1-216ENST00000626000 RNF213Q63HN8 5207 aa7.92□□□□□ -1.14
SNRPA1-216ENST00000626000 TCL1BO95988 128 aa7.91□□□□□ -1.14
SNRPA1-216ENST00000626000 K7ERJ3 54 aa7.9□□□□□ -1.14
SNRPA1-216ENST00000626000 HRCT1Q6UXD1 115 aa7.9□□□□□ -1.14
SNRPA1-216ENST00000626000 FAM218AQ96MZ4 157 aa7.89□□□□□ -1.15
SNRPA1-216ENST00000626000 NDUFV3P56181 108 aaKnown RBP7.87□□□□□ -1.15
SNRPA1-216ENST00000626000 KRTAP13-3Q3SY46 172 aa7.87□□□□□ -1.15
SNRPA1-216ENST00000626000 ORMDL1Q9P0S3 153 aa7.87□□□□□ -1.15
SNRPA1-216ENST00000626000 TMEM256-PLSCR3K7ERE1 68 aa7.86□□□□□ -1.15
SNRPA1-216ENST00000626000 TRACP01848 142 aa7.85□□□□□ -1.15
SNRPA1-216ENST00000626000 SCGB1C2P0DMR2 95 aa7.85□□□□□ -1.15
SNRPA1-216ENST00000626000 FABP2P12104 132 aa7.85□□□□□ -1.15
SNRPA1-216ENST00000626000 IGFL1Q6UW32 110 aa7.85□□□□□ -1.15
SNRPA1-216ENST00000626000 LOC105371267A0A1B0GV96 52 aa7.84□□□□□ -1.15
SNRPA1-216ENST00000626000 ASB16-AS1Q495Z4 193 aa7.84□□□□□ -1.15
SNRPA1-216ENST00000626000 SS18L2Q9UHA2 77 aa7.84□□□□□ -1.15
SNRPA1-216ENST00000626000 LPAP08519 4548 aa7.83□□□□□ -1.16
SNRPA1-216ENST00000626000 TRBV7-7A0A0K0K1E9 115 aa7.83□□□□□ -1.16
SNRPA1-216ENST00000626000 LYRM7Q5U5X0 104 aa7.83□□□□□ -1.16
SNRPA1-216ENST00000626000 H3BMG7 143 aa7.82□□□□□ -1.16
SNRPA1-216ENST00000626000 Q6Q795 121 aa7.82□□□□□ -1.16
SNRPA1-216ENST00000626000 LST1O00453 97 aa7.81□□□□□ -1.16
SNRPA1-216ENST00000626000 TEN1Q86WV5 123 aa7.81□□□□□ -1.16
SNRPA1-216ENST00000626000 H3BUT2 72 aa7.8□□□□□ -1.16
SNRPA1-216ENST00000626000 UBE2V1Q13404 147 aa7.8□□□□□ -1.16
SNRPA1-216ENST00000626000 A0A0G2JQZ4 141 aa7.79□□□□□ -1.16
SNRPA1-216ENST00000626000 C1orf195Q5TG92 126 aa7.79□□□□□ -1.16
SNRPA1-216ENST00000626000 A0A0U1RQV1 116 aa7.78□□□□□ -1.16
SNRPA1-216ENST00000626000 SEC61BP60468 96 aaKnown RBP7.77□□□□□ -1.17
SNRPA1-216ENST00000626000 ATXN8Q156A1 80 aa7.77□□□□□ -1.17
SNRPA1-216ENST00000626000 ANKRD29Q8N6D5 301 aa7.76□□□□□ -1.17
SNRPA1-216ENST00000626000 TRBV20-1A0A075B6N2 111 aa7.74□□□□□ -1.17
SNRPA1-216ENST00000626000 C21orf62-AS1Q17RA5 79 aa7.74□□□□□ -1.17
SNRPA1-216ENST00000626000 TRBV7-4A0A0J9YYF1 115 aa7.73□□□□□ -1.17
SNRPA1-216ENST00000626000 BATFQ16520 125 aa7.72□□□□□ -1.17
SNRPA1-216ENST00000626000 DSCR8Q96T75 97 aa7.71□□□□□ -1.18
SNRPA1-216ENST00000626000 BAALC-AS2P0C853 105 aa7.7□□□□□ -1.18
SNRPA1-216ENST00000626000 RBM3P98179 157 aaKnown RBP7.7□□□□□ -1.18
SNRPA1-216ENST00000626000 A0A087WSZ3 146 aa7.69□□□□□ -1.18
SNRPA1-216ENST00000626000 JMJD7-PLA2G4BH0Y9G9 81 aa7.69□□□□□ -1.18
SNRPA1-216ENST00000626000 KRTAP4-8Q9BYQ9 185 aa7.68□□□□□ -1.18
SNRPA1-216ENST00000626000 C9orf92A6NGG3 77 aa7.67□□□□□ -1.18
SNRPA1-216ENST00000626000 CCKP06307 115 aa7.67□□□□□ -1.18
SNRPA1-216ENST00000626000 A0A1W2PNM2 257 aa7.66□□□□□ -1.18
SNRPA1-216ENST00000626000 C9orf118A6NHY6 69 aa7.66□□□□□ -1.18
SNRPA1-216ENST00000626000 PDE6GP18545 87 aa7.66□□□□□ -1.18
SNRPA1-216ENST00000626000 A0A1B0GW54 56 aa7.65□□□□□ -1.18
SNRPA1-216ENST00000626000 C9JAW5 83 aa7.65□□□□□ -1.18
SNRPA1-216ENST00000626000 NAA38Q9BRA0 125 aaKnown RBP7.65□□□□□ -1.18
SNRPA1-216ENST00000626000 A0A1B0GV72 72 aa7.63□□□□□ -1.19
SNRPA1-216ENST00000626000 A0A1W2PPM0 123 aa7.62□□□□□ -1.19
SNRPA1-216ENST00000626000 TAX1BP3O14907 124 aa7.6□□□□□ -1.19
SNRPA1-216ENST00000626000 COL5A1-AS1Q5SY13 56 aa7.6□□□□□ -1.19
SNRPA1-216ENST00000626000 VPS25Q9BRG1 176 aa7.6□□□□□ -1.19
SNRPA1-216ENST00000626000 MUC2Q02817 5179 aa7.6□□□□□ -1.19
SNRPA1-216ENST00000626000 LOC110117498A0A087WWA1 95 aa7.59□□□□□ -1.19
SNRPA1-216ENST00000626000 H3BT86 120 aa7.59□□□□□ -1.19
SNRPA1-216ENST00000626000 RPL37P61927 97 aaKnown RBP7.59□□□□□ -1.19
SNRPA1-216ENST00000626000 SIGMAR1Q99720 223 aa7.58□□□□□ -1.2
SNRPA1-216ENST00000626000 MUC17Q685J3 4493 aa7.57□□□□□ -1.2
SNRPA1-216ENST00000626000 Q96NJ1 140 aa7.57□□□□□ -1.2
SNRPA1-216ENST00000626000 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.56□□□□□ -1.2
SNRPA1-216ENST00000626000 J3KT08 172 aa7.56□□□□□ -1.2
SNRPA1-216ENST00000626000 IGKV4-1P06312 121 aa7.56□□□□□ -1.2
SNRPA1-216ENST00000626000 OBSCN-AS1Q96MR7 158 aa7.56□□□□□ -1.2
SNRPA1-216ENST00000626000 KRTAP9-2Q9BYQ4 174 aa7.56□□□□□ -1.2
SNRPA1-216ENST00000626000 PCOTHQ58A44 107 aa7.55□□□□□ -1.2
SNRPA1-216ENST00000626000 Q6ZQT0 140 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms