RNA–Protein interactions for RNA: ENST00000622089.4

ITSN2-213, Transcript of intersectin 2, humanhuman

TSL 5 BASIC

Gene ITSN2, Length 5,805 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN2-213ENST00000622089 KRTAP10-2P60368 255 aa5.39□□□□□ -1.55
ITSN2-213ENST00000622089 USP9YO00507 2555 aaPredicted RBP5.38□□□□□ -1.55
ITSN2-213ENST00000622089 A0A087X002 238 aa5.37□□□□□ -1.55
ITSN2-213ENST00000622089 CHD8Q9HCK8 2581 aa5.36□□□□□ -1.55
ITSN2-213ENST00000622089 NOTCH2NLQ7Z3S9 236 aa5.31□□□□□ -1.56
ITSN2-213ENST00000622089 CEP295Q9C0D2 2601 aa5.3□□□□□ -1.56
ITSN2-213ENST00000622089 SETD2Q9BYW2 2564 aaPredicted RBP5.3□□□□□ -1.56
ITSN2-213ENST00000622089 MTORP42345 2549 aa5.3□□□□□ -1.56
ITSN2-213ENST00000622089 A8MUU9 505 aa5.3□□□□□ -1.56
ITSN2-213ENST00000622089 C20orf166-AS1Q96NR2 134 aa5.29□□□□□ -1.56
ITSN2-213ENST00000622089 SRCAPQ6ZRS2 3230 aa5.28□□□□□ -1.56
ITSN2-213ENST00000622089 A8MU10 97 aa5.26□□□□□ -1.57
ITSN2-213ENST00000622089 POLQO75417 2590 aa5.26□□□□□ -1.57
ITSN2-213ENST00000622089 WDR87Q6ZQQ6 2873 aa5.25□□□□□ -1.57
ITSN2-213ENST00000622089 ACANP16112 2415 aa5.24□□□□□ -1.57
ITSN2-213ENST00000622089 KRTAP13-1Q8IUC0 172 aa5.23□□□□□ -1.57
ITSN2-213ENST00000622089 Q6ZRN7 208 aaPredicted RBP5.22□□□□□ -1.57
ITSN2-213ENST00000622089 FASNP49327 2511 aaKnown RBP5.21□□□□□ -1.57
ITSN2-213ENST00000622089 KRTAP11-1Q8IUC1 163 aa5.21□□□□□ -1.58
ITSN2-213ENST00000622089 TNP1P09430 55 aa5.21□□□□□ -1.58
ITSN2-213ENST00000622089 NDUFAF8A1L188 74 aa5.2□□□□□ -1.58
ITSN2-213ENST00000622089 KRTAP7-1Q8IUC3 87 aa5.19□□□□□ -1.58
ITSN2-213ENST00000622089 KRTAP13-2Q52LG2 175 aa5.19□□□□□ -1.58
ITSN2-213ENST00000622089 SPTBN4Q9H254 2564 aa5.17□□□□□ -1.58
ITSN2-213ENST00000622089 PP632Q6XCG6 107 aa5.16□□□□□ -1.58
ITSN2-213ENST00000622089 C10orf95Q9H7T3 257 aa5.11□□□□□ -1.59
ITSN2-213ENST00000622089 EP400Q96L91 3159 aa5.1□□□□□ -1.59
ITSN2-213ENST00000622089 FLNAP21333 2647 aaKnown RBP5.01□□□□□ -1.61
ITSN2-213ENST00000622089 MGAM2Q2M2H8 2515 aa4.96□□□□□ -1.61
ITSN2-213ENST00000622089 CENPFP49454 3210 aa4.96□□□□□ -1.61
ITSN2-213ENST00000622089 P0C880 135 aa4.96□□□□□ -1.62
ITSN2-213ENST00000622089 HECTD1Q9ULT8 2610 aa4.95□□□□□ -1.62
ITSN2-213ENST00000622089 ITPR3Q14573 2671 aa4.95□□□□□ -1.62
ITSN2-213ENST00000622089 H0YAA0 97 aa4.94□□□□□ -1.62
ITSN2-213ENST00000622089 KRTAP21-3Q3LHN1 58 aa4.94□□□□□ -1.62
ITSN2-213ENST00000622089 XP32Q5T750 250 aa4.94□□□□□ -1.62
ITSN2-213ENST00000622089 EPG5Q9HCE0 2579 aa4.93□□□□□ -1.62
ITSN2-213ENST00000622089 KRTAP10-8P60410 259 aa4.91□□□□□ -1.62
ITSN2-213ENST00000622089 USP24Q9UPU5 2620 aa4.91□□□□□ -1.62
ITSN2-213ENST00000622089 KRTAP1-4P0C5Y4 121 aa4.9□□□□□ -1.62
ITSN2-213ENST00000622089 ATRQ13535 2644 aa4.89□□□□□ -1.63
ITSN2-213ENST00000622089 TPRXLQ17RH7 258 aa4.88□□□□□ -1.63
ITSN2-213ENST00000622089 DMBT1Q9UGM3 2413 aaPredicted RBP4.86□□□□□ -1.63
ITSN2-213ENST00000622089 PRO2289Q9P1D8 64 aa4.86□□□□□ -1.63
ITSN2-213ENST00000622089 BPTFQ12830 3046 aa4.85□□□□□ -1.63
ITSN2-213ENST00000622089 FLNBO75369 2602 aaKnown RBP4.84□□□□□ -1.63
ITSN2-213ENST00000622089 MAST4O15021 2626 aa4.81□□□□□ -1.64
ITSN2-213ENST00000622089 HELZ2Q9BYK8 2649 aaKnown RBP4.8□□□□□ -1.64
ITSN2-213ENST00000622089 A0A1B0GVY2 172 aa4.79□□□□□ -1.64
ITSN2-213ENST00000622089 FLG2Q5D862 2391 aaPredicted RBP4.79□□□□□ -1.64
ITSN2-213ENST00000622089 NBEAL1Q6ZS30 2694 aa4.78□□□□□ -1.64
ITSN2-213ENST00000622089 KRTAP13-3Q3SY46 172 aa4.76□□□□□ -1.65
ITSN2-213ENST00000622089 KRTAP10-10P60014 251 aa4.75□□□□□ -1.65
ITSN2-213ENST00000622089 CENPEQ02224 2701 aa4.74□□□□□ -1.65
ITSN2-213ENST00000622089 STAB1Q9NY15 2570 aa4.7□□□□□ -1.66
ITSN2-213ENST00000622089 CFAP46Q8IYW2 2715 aa4.68□□□□□ -1.66
ITSN2-213ENST00000622089 UNC79Q9P2D8 2635 aa4.66□□□□□ -1.66
ITSN2-213ENST00000622089 PRRC2CQ9Y520 2896 aaKnown RBP4.66□□□□□ -1.66
ITSN2-213ENST00000622089 GCN1Q92616 2671 aaKnown RBP4.66□□□□□ -1.66
ITSN2-213ENST00000622089 KMT2BQ9UMN6 2715 aaPredicted RBP4.65□□□□□ -1.66
ITSN2-213ENST00000622089 KRTAP13-4Q3LI77 160 aa4.65□□□□□ -1.66
ITSN2-213ENST00000622089 PCNTO95613 3336 aa4.65□□□□□ -1.67
ITSN2-213ENST00000622089 KRTAP12-2P59991 146 aa4.63□□□□□ -1.67
ITSN2-213ENST00000622089 CHD6Q8TD26 2715 aa4.62□□□□□ -1.67
ITSN2-213ENST00000622089 A0A0C4DFX4 3053 aa4.62□□□□□ -1.67
ITSN2-213ENST00000622089 GOLGB1Q14789 3259 aaKnown RBP4.62□□□□□ -1.67
ITSN2-213ENST00000622089 TEP1Q99973 2627 aaKnown RBP4.6□□□□□ -1.67
ITSN2-213ENST00000622089 BAHCC1Q9P281 2608 aa4.59□□□□□ -1.68
ITSN2-213ENST00000622089 TEX15Q9BXT5 2789 aa4.58□□□□□ -1.68
ITSN2-213ENST00000622089 DNAH12Q6ZR08 3092 aa4.56□□□□□ -1.68
ITSN2-213ENST00000622089 UTRNP46939 3433 aa4.56□□□□□ -1.68
ITSN2-213ENST00000622089 STAB2Q8WWQ8 2551 aa4.55□□□□□ -1.68
ITSN2-213ENST00000622089 KRTAP12-1P59990 96 aa4.55□□□□□ -1.68
ITSN2-213ENST00000622089 CHD7Q9P2D1 2997 aa4.54□□□□□ -1.68
ITSN2-213ENST00000622089 NSD1Q96L73 2696 aaPredicted RBP4.54□□□□□ -1.68
ITSN2-213ENST00000622089 CHD9Q3L8U1 2897 aa4.53□□□□□ -1.68
ITSN2-213ENST00000622089 SETXQ7Z333 2677 aaKnown RBP4.53□□□□□ -1.68
ITSN2-213ENST00000622089 AKAP13Q12802 2813 aa4.52□□□□□ -1.69
ITSN2-213ENST00000622089 NBEAL2Q6ZNJ1 2754 aa4.5□□□□□ -1.69
ITSN2-213ENST00000622089 C5orf42Q9H799 3197 aa4.5□□□□□ -1.69
ITSN2-213ENST00000622089 COL6A5A8TX70 2615 aa4.5□□□□□ -1.69
ITSN2-213ENST00000622089 ITPR2Q14571 2701 aa4.46□□□□□ -1.7
ITSN2-213ENST00000622089 NOTCH1P46531 2555 aa4.46□□□□□ -1.7
ITSN2-213ENST00000622089 ZNF292O60281 2723 aa4.46□□□□□ -1.7
ITSN2-213ENST00000622089 KRTAP15-1Q3LI76 137 aa4.45□□□□□ -1.7
ITSN2-213ENST00000622089 INE1O15225 51 aa4.43□□□□□ -1.7
ITSN2-213ENST00000622089 MAP1AP78559 2803 aaPredicted RBP4.42□□□□□ -1.7
ITSN2-213ENST00000622089 TRANK1O15050 2925 aa4.42□□□□□ -1.7
ITSN2-213ENST00000622089 KRTAP3-1Q9BYR8 98 aa4.42□□□□□ -1.7
ITSN2-213ENST00000622089 IGSF10Q6WRI0 2623 aa4.42□□□□□ -1.7
ITSN2-213ENST00000622089 MGAQ8IWI9 3026 aa4.39□□□□□ -1.71
ITSN2-213ENST00000622089 CEP350Q5VT06 3117 aa4.37□□□□□ -1.71
ITSN2-213ENST00000622089 APCP25054 2843 aa4.35□□□□□ -1.71
ITSN2-213ENST00000622089 KRTAP10-6P60371 365 aaPredicted RBP4.34□□□□□ -1.71
ITSN2-213ENST00000622089 FREM2Q5SZK8 3169 aa4.34□□□□□ -1.71
ITSN2-213ENST00000622089 UBR5O95071 2799 aaPredicted RBP4.32□□□□□ -1.72
ITSN2-213ENST00000622089 LAMA1P25391 3075 aa4.29□□□□□ -1.72
ITSN2-213ENST00000622089 CFAP54Q96N23 3096 aa4.29□□□□□ -1.72
ITSN2-213ENST00000622089 RANBP2P49792 3224 aaKnown RBP4.27□□□□□ -1.73
ITSN2-213ENST00000622089 ITPR1Q14643 2758 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 197.8 ms