RNA–Protein interactions for RNA: ENST00000621757.1

COL8A1-208, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-208ENST00000621757 PRO1933Q9H354 126 aa6.78□□□□□ -1.32
COL8A1-208ENST00000621757 UQCR10Q9UDW1 63 aa6.78□□□□□ -1.32
COL8A1-208ENST00000621757 A0A0G2JQZ4 141 aa6.77□□□□□ -1.33
COL8A1-208ENST00000621757 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.77□□□□□ -1.33
COL8A1-208ENST00000621757 PRO1854Q9UHT4 67 aa6.77□□□□□ -1.33
COL8A1-208ENST00000621757 FAM218AQ96MZ4 157 aa6.76□□□□□ -1.33
COL8A1-208ENST00000621757 LIMD2Q9BT23 127 aa6.76□□□□□ -1.33
COL8A1-208ENST00000621757 CDIP1Q9H305 208 aa6.76□□□□□ -1.33
COL8A1-208ENST00000621757 F8WEM9 126 aa6.75□□□□□ -1.33
COL8A1-208ENST00000621757 K7ERJ3 54 aa6.75□□□□□ -1.33
COL8A1-208ENST00000621757 CD164Q04900 197 aa6.75□□□□□ -1.33
COL8A1-208ENST00000621757 H0YGX0 51 aa6.74□□□□□ -1.33
COL8A1-208ENST00000621757 KRTAP13-3Q3SY46 172 aa6.74□□□□□ -1.33
COL8A1-208ENST00000621757 MUC2Q02817 5179 aa6.73□□□□□ -1.33
COL8A1-208ENST00000621757 TRIAP1O43715 76 aa6.73□□□□□ -1.33
COL8A1-208ENST00000621757 SMIM6P0DI80 62 aa6.73□□□□□ -1.33
COL8A1-208ENST00000621757 MUC17Q685J3 4493 aa6.72□□□□□ -1.33
COL8A1-208ENST00000621757 PPDPFLQ8WWR9 84 aa6.72□□□□□ -1.33
COL8A1-208ENST00000621757 IGLV8-61A0A075B6I0 122 aa6.7□□□□□ -1.34
COL8A1-208ENST00000621757 SNCGO76070 127 aa6.7□□□□□ -1.34
COL8A1-208ENST00000621757 OCIAD2Q56VL3 154 aa6.69□□□□□ -1.34
COL8A1-208ENST00000621757 Q5XG85 94 aa6.69□□□□□ -1.34
COL8A1-208ENST00000621757 Q6JHZ5 121 aa6.69□□□□□ -1.34
COL8A1-208ENST00000621757 IGFL1Q6UW32 110 aa6.69□□□□□ -1.34
COL8A1-208ENST00000621757 CLEC2BQ92478 149 aa6.69□□□□□ -1.34
COL8A1-208ENST00000621757 SNHG12Q9BXW3 62 aa6.69□□□□□ -1.34
COL8A1-208ENST00000621757 A0A1B0GX51 115 aa6.68□□□□□ -1.34
COL8A1-208ENST00000621757 H3BUT2 72 aa6.68□□□□□ -1.34
COL8A1-208ENST00000621757 PSMB2P49721 201 aa6.68□□□□□ -1.34
COL8A1-208ENST00000621757 KRTAP9-2Q9BYQ4 174 aa6.67□□□□□ -1.34
COL8A1-208ENST00000621757 LCE2DQ5TA82 110 aaPredicted RBP6.65□□□□□ -1.34
COL8A1-208ENST00000621757 C1orf195Q5TG92 126 aa6.65□□□□□ -1.34
COL8A1-208ENST00000621757 TRBV7-7A0A0K0K1E9 115 aa6.64□□□□□ -1.35
COL8A1-208ENST00000621757 COX6CP09669 75 aa6.64□□□□□ -1.35
COL8A1-208ENST00000621757 NDUFV3P56181 108 aaKnown RBP6.64□□□□□ -1.35
COL8A1-208ENST00000621757 TCL1BO95988 128 aa6.63□□□□□ -1.35
COL8A1-208ENST00000621757 DNAL4O96015 105 aa6.63□□□□□ -1.35
COL8A1-208ENST00000621757 FABP2P12104 132 aa6.63□□□□□ -1.35
COL8A1-208ENST00000621757 XP32Q5T750 250 aa6.63□□□□□ -1.35
COL8A1-208ENST00000621757 M0R143 59 aa6.62□□□□□ -1.35
COL8A1-208ENST00000621757 GHRHP01286 108 aa6.62□□□□□ -1.35
COL8A1-208ENST00000621757 A0A0U1RQV1 116 aa6.61□□□□□ -1.35
COL8A1-208ENST00000621757 C9orf92A6NGG3 77 aa6.61□□□□□ -1.35
COL8A1-208ENST00000621757 ORMDL1Q9P0S3 153 aa6.61□□□□□ -1.35
COL8A1-208ENST00000621757 H3BMG7 143 aa6.6□□□□□ -1.35
COL8A1-208ENST00000621757 ASB16-AS1Q495Z4 193 aa6.6□□□□□ -1.35
COL8A1-208ENST00000621757 LCE2AQ5TA79 106 aaPredicted RBP6.6□□□□□ -1.35
COL8A1-208ENST00000621757 TSTD3H0UI37 97 aa6.58□□□□□ -1.36
COL8A1-208ENST00000621757 LST1O00453 97 aa6.58□□□□□ -1.36
COL8A1-208ENST00000621757 SCGB1C2P0DMR2 95 aa6.58□□□□□ -1.36
COL8A1-208ENST00000621757 Q6Q795 121 aa6.58□□□□□ -1.36
COL8A1-208ENST00000621757 A0A1B0GV72 72 aa6.57□□□□□ -1.36
COL8A1-208ENST00000621757 TRACP01848 142 aa6.57□□□□□ -1.36
COL8A1-208ENST00000621757 SEC61BP60468 96 aaKnown RBP6.57□□□□□ -1.36
COL8A1-208ENST00000621757 FAT4Q6V0I7 4981 aa6.56□□□□□ -1.36
COL8A1-208ENST00000621757 H3BQ85 93 aa6.56□□□□□ -1.36
COL8A1-208ENST00000621757 TEN1Q86WV5 123 aa6.56□□□□□ -1.36
COL8A1-208ENST00000621757 NAA38Q9BRA0 125 aaKnown RBP6.56□□□□□ -1.36
COL8A1-208ENST00000621757 TMEM256-PLSCR3K7ERE1 68 aa6.55□□□□□ -1.36
COL8A1-208ENST00000621757 A0A087WSZ3 146 aa6.54□□□□□ -1.36
COL8A1-208ENST00000621757 A0A1W2PNM2 257 aa6.54□□□□□ -1.36
COL8A1-208ENST00000621757 SS18L2Q9UHA2 77 aa6.54□□□□□ -1.36
COL8A1-208ENST00000621757 BATFQ16520 125 aa6.53□□□□□ -1.36
COL8A1-208ENST00000621757 KRTAP4-1Q9BYQ7 146 aa6.53□□□□□ -1.36
COL8A1-208ENST00000621757 KRTAP9-6A0A140TA67 174 aa6.52□□□□□ -1.37
COL8A1-208ENST00000621757 UBE2V1Q13404 147 aa6.52□□□□□ -1.37
COL8A1-208ENST00000621757 ANKRD29Q8N6D5 301 aa6.52□□□□□ -1.37
COL8A1-208ENST00000621757 ATXN8Q156A1 80 aa6.5□□□□□ -1.37
COL8A1-208ENST00000621757 PCOTHQ58A44 107 aa6.49□□□□□ -1.37
COL8A1-208ENST00000621757 Q96NJ1 140 aa6.49□□□□□ -1.37
COL8A1-208ENST00000621757 TRBV7-4A0A0J9YYF1 115 aa6.48□□□□□ -1.37
COL8A1-208ENST00000621757 BAALC-AS2P0C853 105 aa6.48□□□□□ -1.37
COL8A1-208ENST00000621757 A0A1B0GV90 55 aa6.47□□□□□ -1.37
COL8A1-208ENST00000621757 CCKP06307 115 aa6.47□□□□□ -1.37
COL8A1-208ENST00000621757 RPL37P61927 97 aaKnown RBP6.47□□□□□ -1.37
COL8A1-208ENST00000621757 OBSCN-AS1Q96MR7 158 aa6.47□□□□□ -1.37
COL8A1-208ENST00000621757 RBM3P98179 157 aaKnown RBP6.46□□□□□ -1.38
COL8A1-208ENST00000621757 LYRM7Q5U5X0 104 aa6.46□□□□□ -1.38
COL8A1-208ENST00000621757 DSCR8Q96T75 97 aa6.44□□□□□ -1.38
COL8A1-208ENST00000621757 SIGMAR1Q99720 223 aa6.44□□□□□ -1.38
COL8A1-208ENST00000621757 VPS25Q9BRG1 176 aa6.44□□□□□ -1.38
COL8A1-208ENST00000621757 TAX1BP3O14907 124 aa6.43□□□□□ -1.38
COL8A1-208ENST00000621757 TRBV20-1A0A075B6N2 111 aa6.42□□□□□ -1.38
COL8A1-208ENST00000621757 C9orf118A6NHY6 69 aa6.42□□□□□ -1.38
COL8A1-208ENST00000621757 C9JAW5 83 aa6.41□□□□□ -1.38
COL8A1-208ENST00000621757 IGKV4-1P06312 121 aa6.4□□□□□ -1.38
COL8A1-208ENST00000621757 Q75L30 129 aa6.4□□□□□ -1.38
COL8A1-208ENST00000621757 A0A1W2PPM0 123 aa6.39□□□□□ -1.39
COL8A1-208ENST00000621757 JMJD7-PLA2G4BH0Y9G9 81 aa6.39□□□□□ -1.39
COL8A1-208ENST00000621757 DSCR10P59022 87 aa6.39□□□□□ -1.39
COL8A1-208ENST00000621757 DEFB116Q30KQ4 102 aa6.39□□□□□ -1.39
COL8A1-208ENST00000621757 LINC00472Q9H8W2 130 aa6.39□□□□□ -1.39
COL8A1-208ENST00000621757 Q6ZQT0 140 aa6.38□□□□□ -1.39
COL8A1-208ENST00000621757 LOC110117498A0A087WWA1 95 aa6.37□□□□□ -1.39
COL8A1-208ENST00000621757 C14orf132Q9NPU4 83 aa6.37□□□□□ -1.39
COL8A1-208ENST00000621757 MTURNQ8N3F0 131 aa6.36□□□□□ -1.39
COL8A1-208ENST00000621757 C20orf166-AS1Q96NR2 134 aa6.36□□□□□ -1.39
COL8A1-208ENST00000621757 KRTAP19-2Q3LHN2 52 aa6.35□□□□□ -1.39
COL8A1-208ENST00000621757 A8MUU9 505 aa6.34□□□□□ -1.39
COL8A1-208ENST00000621757 H3BT86 120 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms