RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 CDH23Q9H251 3354 aa6.21□□□□□ -1.42
CLTCL1-211ENST00000621271 CD164Q04900 197 aa6.2□□□□□ -1.42
CLTCL1-211ENST00000621271 KMT2BQ9UMN6 2715 aaPredicted RBP6.2□□□□□ -1.42
CLTCL1-211ENST00000621271 LCE6AA0A183 80 aa6.19□□□□□ -1.42
CLTCL1-211ENST00000621271 IGLV5-48A0A075B6I7 105 aa6.19□□□□□ -1.42
CLTCL1-211ENST00000621271 UNC80Q8N2C7 3258 aa6.18□□□□□ -1.42
CLTCL1-211ENST00000621271 FAM229BQ4G0N7 80 aa6.18□□□□□ -1.42
CLTCL1-211ENST00000621271 Q8N1X5 172 aa6.18□□□□□ -1.42
CLTCL1-211ENST00000621271 A0A1W2PNM2 257 aa6.16□□□□□ -1.42
CLTCL1-211ENST00000621271 OCR1Q9BZK8 76 aa6.16□□□□□ -1.42
CLTCL1-211ENST00000621271 Q5VSD8 79 aa6.15□□□□□ -1.42
CLTCL1-211ENST00000621271 KTN1-AS1Q86SY8 53 aa6.15□□□□□ -1.42
CLTCL1-211ENST00000621271 SPANXA2-OT1Q8N9U9 137 aa6.15□□□□□ -1.43
CLTCL1-211ENST00000621271 PLAC8Q9NZF1 115 aa6.14□□□□□ -1.43
CLTCL1-211ENST00000621271 ITPR2Q14571 2701 aa6.14□□□□□ -1.43
CLTCL1-211ENST00000621271 Q5XG85 94 aa6.13□□□□□ -1.43
CLTCL1-211ENST00000621271 A0A0D9SG42 100 aa6.13□□□□□ -1.43
CLTCL1-211ENST00000621271 FRYLO94915 3013 aa6.13□□□□□ -1.43
CLTCL1-211ENST00000621271 MIR22HGQ0VDD5 57 aa6.12□□□□□ -1.43
CLTCL1-211ENST00000621271 Q1T7F1 81 aa6.12□□□□□ -1.43
CLTCL1-211ENST00000621271 SEC61BP60468 96 aaKnown RBP6.12□□□□□ -1.43
CLTCL1-211ENST00000621271 UBR5O95071 2799 aaPredicted RBP6.12□□□□□ -1.43
CLTCL1-211ENST00000621271 TEX15Q9BXT5 2789 aa6.12□□□□□ -1.43
CLTCL1-211ENST00000621271 CYSTM1Q9H1C7 97 aa6.11□□□□□ -1.43
CLTCL1-211ENST00000621271 CAMK2N1Q7Z7J9 78 aa6.11□□□□□ -1.43
CLTCL1-211ENST00000621271 ITPR1Q14643 2758 aa6.1□□□□□ -1.43
CLTCL1-211ENST00000621271 CR1P17927 2039 aa6.09□□□□□ -1.43
CLTCL1-211ENST00000621271 HIVEP1P15822 2718 aa6.08□□□□□ -1.44
CLTCL1-211ENST00000621271 DMXL2Q8TDJ6 3036 aa6.08□□□□□ -1.44
CLTCL1-211ENST00000621271 LCA10Q71F78 164 aa6.08□□□□□ -1.44
CLTCL1-211ENST00000621271 CDC42SE1Q9NRR8 79 aa6.07□□□□□ -1.44
CLTCL1-211ENST00000621271 XIRP2A4UGR9 3374 aa6.07□□□□□ -1.44
CLTCL1-211ENST00000621271 FP248Q71RG6 208 aaPredicted RBP6.06□□□□□ -1.44
CLTCL1-211ENST00000621271 CSAG1Q6PB30 78 aa6.05□□□□□ -1.44
CLTCL1-211ENST00000621271 LUZP6Q538Z0 58 aa6.05□□□□□ -1.44
CLTCL1-211ENST00000621271 FRYQ5TBA9 3013 aa6.05□□□□□ -1.44
CLTCL1-211ENST00000621271 NBEAL1Q6ZS30 2694 aa6.04□□□□□ -1.44
CLTCL1-211ENST00000621271 DMXL1Q9Y485 3027 aa6.04□□□□□ -1.44
CLTCL1-211ENST00000621271 FLG2Q5D862 2391 aaPredicted RBP6.03□□□□□ -1.44
CLTCL1-211ENST00000621271 NOTCH1P46531 2555 aa6.03□□□□□ -1.44
CLTCL1-211ENST00000621271 KRTAP10-1P60331 282 aa6.02□□□□□ -1.45
CLTCL1-211ENST00000621271 ZCCHC13Q8WW36 166 aaKnown RBP6.01□□□□□ -1.45
CLTCL1-211ENST00000621271 ASH1LQ9NR48 2969 aaKnown RBP6.01□□□□□ -1.45
CLTCL1-211ENST00000621271 VCANP13611 3396 aa6.01□□□□□ -1.45
CLTCL1-211ENST00000621271 KALRNO60229 2985 aa6□□□□□ -1.45
CLTCL1-211ENST00000621271 VPS13AQ96RL7 3174 aa6□□□□□ -1.45
CLTCL1-211ENST00000621271 HRES1P13985 223 aa6□□□□□ -1.45
CLTCL1-211ENST00000621271 KRTAP1-5Q9BYS1 174 aa6□□□□□ -1.45
CLTCL1-211ENST00000621271 OXTP01178 125 aa6□□□□□ -1.45
CLTCL1-211ENST00000621271 KRTAP10-2P60368 255 aa6□□□□□ -1.45
CLTCL1-211ENST00000621271 Q8NDZ9 215 aa6□□□□□ -1.45
CLTCL1-211ENST00000621271 NSD1Q96L73 2696 aaPredicted RBP5.98□□□□□ -1.45
CLTCL1-211ENST00000621271 Q75L30 129 aa5.98□□□□□ -1.45
CLTCL1-211ENST00000621271 S4R3F8 94 aa5.98□□□□□ -1.45
CLTCL1-211ENST00000621271 APCP25054 2843 aa5.98□□□□□ -1.45
CLTCL1-211ENST00000621271 EYSQ5T1H1 3165 aa5.97□□□□□ -1.45
CLTCL1-211ENST00000621271 Q8N9P0 234 aaPredicted RBP5.95□□□□□ -1.46
CLTCL1-211ENST00000621271 COL12A1Q99715 3063 aa5.95□□□□□ -1.46
CLTCL1-211ENST00000621271 MAP1AP78559 2803 aaPredicted RBP5.95□□□□□ -1.46
CLTCL1-211ENST00000621271 REV3LO60673 3130 aa5.94□□□□□ -1.46
CLTCL1-211ENST00000621271 SPRR1AP35321 89 aa5.94□□□□□ -1.46
CLTCL1-211ENST00000621271 SPINK7P58062 85 aa5.94□□□□□ -1.46
CLTCL1-211ENST00000621271 ATMQ13315 3056 aa5.93□□□□□ -1.46
CLTCL1-211ENST00000621271 LINC00483Q53H64 154 aa5.93□□□□□ -1.46
CLTCL1-211ENST00000621271 A0A1B0GU33 70 aa5.93□□□□□ -1.46
CLTCL1-211ENST00000621271 NBEAQ8NFP9 2946 aa5.93□□□□□ -1.46
CLTCL1-211ENST00000621271 R4GN34 69 aa5.93□□□□□ -1.46
CLTCL1-211ENST00000621271 DMBT1Q9UGM3 2413 aaPredicted RBP5.92□□□□□ -1.46
CLTCL1-211ENST00000621271 LINC01558Q9Y6Z2 57 aa5.92□□□□□ -1.46
CLTCL1-211ENST00000621271 TENM4Q6N022 2769 aa5.91□□□□□ -1.46
CLTCL1-211ENST00000621271 SPRR1BP22528 89 aa5.91□□□□□ -1.46
CLTCL1-211ENST00000621271 Q5VV11 94 aa5.9□□□□□ -1.46
CLTCL1-211ENST00000621271 LAMA1P25391 3075 aa5.9□□□□□ -1.47
CLTCL1-211ENST00000621271 Q6ZR54 194 aa5.89□□□□□ -1.47
CLTCL1-211ENST00000621271 STAB2Q8WWQ8 2551 aa5.89□□□□□ -1.47
CLTCL1-211ENST00000621271 UTP20O75691 2785 aaKnown RBP5.89□□□□□ -1.47
CLTCL1-211ENST00000621271 MMP24-AS1A0A0U1RRL7 71 aa5.89□□□□□ -1.47
CLTCL1-211ENST00000621271 SPTBN5Q9NRC6 3674 aaKnown RBP5.85□□□□□ -1.47
CLTCL1-211ENST00000621271 Q5W150 140 aa5.84□□□□□ -1.47
CLTCL1-211ENST00000621271 LINC00472Q9H8W2 130 aa5.84□□□□□ -1.48
CLTCL1-211ENST00000621271 DMAC1Q96GE9 116 aa5.83□□□□□ -1.48
CLTCL1-211ENST00000621271 KRTAP26-1Q6PEX3 210 aa5.83□□□□□ -1.48
CLTCL1-211ENST00000621271 PLAC4Q8WY50 150 aa5.82□□□□□ -1.48
CLTCL1-211ENST00000621271 A0A0A0MQY5 61 aa5.8□□□□□ -1.48
CLTCL1-211ENST00000621271 FREM2Q5SZK8 3169 aa5.8□□□□□ -1.48
CLTCL1-211ENST00000621271 ZZEF1O43149 2961 aa5.79□□□□□ -1.48
CLTCL1-211ENST00000621271 TACC2O95359 2948 aa5.79□□□□□ -1.48
CLTCL1-211ENST00000621271 PRAC1Q96KF2 57 aa5.78□□□□□ -1.48
CLTCL1-211ENST00000621271 PANO1I0J062 215 aa5.78□□□□□ -1.48
CLTCL1-211ENST00000621271 M0QZ58 72 aa5.78□□□□□ -1.48
CLTCL1-211ENST00000621271 BOD1L1Q8NFC6 3051 aa5.77□□□□□ -1.49
CLTCL1-211ENST00000621271 CFAP47Q6ZTR5 3102 aa5.76□□□□□ -1.49
CLTCL1-211ENST00000621271 A0A087X002 238 aa5.74□□□□□ -1.49
CLTCL1-211ENST00000621271 NIPBLQ6KC79 2804 aaeCLIP5.73□□□□□ -1.49
CLTCL1-211ENST00000621271 KRTAP4-16G5E9R7 235 aaPredicted RBP5.73□□□□□ -1.49
CLTCL1-211ENST00000621271 H3BS24 57 aa5.73□□□□□ -1.49
CLTCL1-211ENST00000621271 KRTAP29-1A8MX34 341 aaPredicted RBP5.72□□□□□ -1.49
CLTCL1-211ENST00000621271 CELSR2Q9HCU4 2923 aa5.69□□□□□ -1.5
CLTCL1-211ENST00000621271 DNAH14Q0VDD8 3507 aa5.69□□□□□ -1.5
CLTCL1-211ENST00000621271 USP34Q70CQ2 3546 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms