RNA–Protein interactions for RNA: ENST00000618834.1

PCDHA4-204, Transcript of protocadherin alpha 4, humanhuman

BASIC

Gene PCDHA4, Length 10,557 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-204ENST00000618834 CASC10Q5T4H9 136 aa7.23□□□□□ -1.25
PCDHA4-204ENST00000618834 APCP25054 2843 aa7.22□□□□□ -1.25
PCDHA4-204ENST00000618834 ROMO1P60602 79 aa7.22□□□□□ -1.25
PCDHA4-204ENST00000618834 CYSTM1Q9H1C7 97 aa7.22□□□□□ -1.25
PCDHA4-204ENST00000618834 TEP1Q99973 2627 aaKnown RBP7.21□□□□□ -1.25
PCDHA4-204ENST00000618834 ZCCHC13Q8WW36 166 aaKnown RBP7.21□□□□□ -1.26
PCDHA4-204ENST00000618834 BAHCC1Q9P281 2608 aa7.2□□□□□ -1.26
PCDHA4-204ENST00000618834 MMP24-AS1A0A0U1RRL7 71 aa7.19□□□□□ -1.26
PCDHA4-204ENST00000618834 ITPR2Q14571 2701 aa7.18□□□□□ -1.26
PCDHA4-204ENST00000618834 Q5W150 140 aa7.17□□□□□ -1.26
PCDHA4-204ENST00000618834 M0R2T5 61 aa7.16□□□□□ -1.26
PCDHA4-204ENST00000618834 A0A096LNT2 108 aa7.15□□□□□ -1.27
PCDHA4-204ENST00000618834 CEP350Q5VT06 3117 aa7.15□□□□□ -1.27
PCDHA4-204ENST00000618834 ASB16-AS1Q495Z4 193 aa7.14□□□□□ -1.27
PCDHA4-204ENST00000618834 KRTAP16-1A8MUX0 517 aa7.12□□□□□ -1.27
PCDHA4-204ENST00000618834 R4GN34 69 aa7.12□□□□□ -1.27
PCDHA4-204ENST00000618834 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.12□□□□□ -1.27
PCDHA4-204ENST00000618834 DNAH12Q6ZR08 3092 aa7.11□□□□□ -1.27
PCDHA4-204ENST00000618834 NSD1Q96L73 2696 aaPredicted RBP7.11□□□□□ -1.27
PCDHA4-204ENST00000618834 RPL37P61927 97 aaKnown RBP7.11□□□□□ -1.27
PCDHA4-204ENST00000618834 ZNF292O60281 2723 aa7.1□□□□□ -1.27
PCDHA4-204ENST00000618834 NBEAL2Q6ZNJ1 2754 aa7.09□□□□□ -1.27
PCDHA4-204ENST00000618834 H1FX-AS1Q4G0G2 97 aa7.09□□□□□ -1.28
PCDHA4-204ENST00000618834 SETXQ7Z333 2677 aaKnown RBP7.08□□□□□ -1.28
PCDHA4-204ENST00000618834 KRTAP10-3P60369 221 aa7.08□□□□□ -1.28
PCDHA4-204ENST00000618834 UTP20O75691 2785 aaKnown RBP7.06□□□□□ -1.28
PCDHA4-204ENST00000618834 OXTP01178 125 aa7.05□□□□□ -1.28
PCDHA4-204ENST00000618834 TNP2Q05952 138 aa7.05□□□□□ -1.28
PCDHA4-204ENST00000618834 LINC00472Q9H8W2 130 aa7.05□□□□□ -1.28
PCDHA4-204ENST00000618834 ITPR1Q14643 2758 aa7.04□□□□□ -1.28
PCDHA4-204ENST00000618834 M0QZ58 72 aa7□□□□□ -1.29
PCDHA4-204ENST00000618834 CFAP54Q96N23 3096 aa7□□□□□ -1.29
PCDHA4-204ENST00000618834 SPRR1AP35321 89 aa6.97□□□□□ -1.29
PCDHA4-204ENST00000618834 PLAC8Q9NZF1 115 aa6.96□□□□□ -1.29
PCDHA4-204ENST00000618834 Q6ZR54 194 aa6.95□□□□□ -1.3
PCDHA4-204ENST00000618834 Q8NDZ9 215 aa6.95□□□□□ -1.3
PCDHA4-204ENST00000618834 C5orf42Q9H799 3197 aa6.94□□□□□ -1.3
PCDHA4-204ENST00000618834 IGSF10Q6WRI0 2623 aa6.94□□□□□ -1.3
PCDHA4-204ENST00000618834 UBR5O95071 2799 aaPredicted RBP6.94□□□□□ -1.3
PCDHA4-204ENST00000618834 ADM2Q7Z4H4 148 aa6.94□□□□□ -1.3
PCDHA4-204ENST00000618834 SPATA8Q6RVD6 105 aa6.93□□□□□ -1.3
PCDHA4-204ENST00000618834 KRTAP26-1Q6PEX3 210 aa6.92□□□□□ -1.3
PCDHA4-204ENST00000618834 SPRR1BP22528 89 aa6.91□□□□□ -1.3
PCDHA4-204ENST00000618834 KRTAP25-1Q3LHN0 102 aa6.9□□□□□ -1.3
PCDHA4-204ENST00000618834 PLAC4Q8WY50 150 aa6.9□□□□□ -1.31
PCDHA4-204ENST00000618834 TRANK1O15050 2925 aa6.89□□□□□ -1.31
PCDHA4-204ENST00000618834 A6NN06 94 aa6.89□□□□□ -1.31
PCDHA4-204ENST00000618834 SEC61BP60468 96 aaKnown RBP6.89□□□□□ -1.31
PCDHA4-204ENST00000618834 GOLGB1Q14789 3259 aaKnown RBP6.88□□□□□ -1.31
PCDHA4-204ENST00000618834 PCNTO95613 3336 aa6.88□□□□□ -1.31
PCDHA4-204ENST00000618834 A0A0C4DFX4 3053 aa6.86□□□□□ -1.31
PCDHA4-204ENST00000618834 PANO1I0J062 215 aa6.86□□□□□ -1.31
PCDHA4-204ENST00000618834 LRBAP50851 2863 aa6.85□□□□□ -1.31
PCDHA4-204ENST00000618834 DSPP15924 2871 aaKnown RBP6.84□□□□□ -1.31
PCDHA4-204ENST00000618834 NDUFAF8A1L188 74 aa6.83□□□□□ -1.32
PCDHA4-204ENST00000618834 C20orf166-AS1Q96NR2 134 aa6.82□□□□□ -1.32
PCDHA4-204ENST00000618834 KRTAP1-3Q8IUG1 177 aa6.8□□□□□ -1.32
PCDHA4-204ENST00000618834 KRTAP1-1Q07627 177 aa6.77□□□□□ -1.33
PCDHA4-204ENST00000618834 KRTAP29-1A8MX34 341 aaPredicted RBP6.76□□□□□ -1.33
PCDHA4-204ENST00000618834 MGAQ8IWI9 3026 aa6.74□□□□□ -1.33
PCDHA4-204ENST00000618834 Q5VSD8 79 aa6.73□□□□□ -1.33
PCDHA4-204ENST00000618834 UTRNP46939 3433 aa6.69□□□□□ -1.34
PCDHA4-204ENST00000618834 A8MU10 97 aa6.69□□□□□ -1.34
PCDHA4-204ENST00000618834 LAMA2P24043 3122 aaKnown RBP6.68□□□□□ -1.34
PCDHA4-204ENST00000618834 KRTAP1-5Q9BYS1 174 aa6.68□□□□□ -1.34
PCDHA4-204ENST00000618834 KRTAP4-16G5E9R7 235 aaPredicted RBP6.68□□□□□ -1.34
PCDHA4-204ENST00000618834 FRYQ5TBA9 3013 aa6.67□□□□□ -1.34
PCDHA4-204ENST00000618834 HIVEP1P15822 2718 aa6.66□□□□□ -1.34
PCDHA4-204ENST00000618834 A8MUU9 505 aa6.64□□□□□ -1.35
PCDHA4-204ENST00000618834 C10orf95Q9H7T3 257 aa6.64□□□□□ -1.35
PCDHA4-204ENST00000618834 KALRNO60229 2985 aa6.63□□□□□ -1.35
PCDHA4-204ENST00000618834 KRTAP10-1P60331 282 aa6.62□□□□□ -1.35
PCDHA4-204ENST00000618834 LCE6AA0A183 80 aa6.62□□□□□ -1.35
PCDHA4-204ENST00000618834 A0A087X002 238 aa6.61□□□□□ -1.35
PCDHA4-204ENST00000618834 CHD9Q3L8U1 2897 aa6.6□□□□□ -1.35
PCDHA4-204ENST00000618834 NOTCH2NLQ7Z3S9 236 aa6.59□□□□□ -1.35
PCDHA4-204ENST00000618834 CHD7Q9P2D1 2997 aa6.58□□□□□ -1.36
PCDHA4-204ENST00000618834 KRTAP10-2P60368 255 aa6.57□□□□□ -1.36
PCDHA4-204ENST00000618834 FRYLO94915 3013 aa6.57□□□□□ -1.36
PCDHA4-204ENST00000618834 ASH1LQ9NR48 2969 aaKnown RBP6.57□□□□□ -1.36
PCDHA4-204ENST00000618834 TRIOO75962 3097 aa6.56□□□□□ -1.36
PCDHA4-204ENST00000618834 TENM1Q9UKZ4 2725 aa6.56□□□□□ -1.36
PCDHA4-204ENST00000618834 RPS29P62273 56 aaKnown RBP6.55□□□□□ -1.36
PCDHA4-204ENST00000618834 FLNCQ14315 2725 aa6.54□□□□□ -1.36
PCDHA4-204ENST00000618834 KRTAP11-1Q8IUC1 163 aa6.51□□□□□ -1.37
PCDHA4-204ENST00000618834 TNP1P09430 55 aa6.51□□□□□ -1.37
PCDHA4-204ENST00000618834 NF1P21359 2839 aa6.51□□□□□ -1.37
PCDHA4-204ENST00000618834 TENM3Q9P273 2699 aa6.51□□□□□ -1.37
PCDHA4-204ENST00000618834 VPS13AQ96RL7 3174 aa6.5□□□□□ -1.37
PCDHA4-204ENST00000618834 TACC2O95359 2948 aa6.48□□□□□ -1.37
PCDHA4-204ENST00000618834 PP632Q6XCG6 107 aa6.47□□□□□ -1.37
PCDHA4-204ENST00000618834 TGP01266 2768 aa6.47□□□□□ -1.37
PCDHA4-204ENST00000618834 CELSR2Q9HCU4 2923 aa6.46□□□□□ -1.38
PCDHA4-204ENST00000618834 NIPBLQ6KC79 2804 aaeCLIP6.41□□□□□ -1.38
PCDHA4-204ENST00000618834 NBEAQ8NFP9 2946 aa6.39□□□□□ -1.39
PCDHA4-204ENST00000618834 WDFY4Q6ZS81 3184 aa6.39□□□□□ -1.39
PCDHA4-204ENST00000618834 CRYBG3Q68DQ2 2970 aa6.39□□□□□ -1.39
PCDHA4-204ENST00000618834 FREM2Q5SZK8 3169 aa6.38□□□□□ -1.39
PCDHA4-204ENST00000618834 COL12A1Q99715 3063 aa6.38□□□□□ -1.39
PCDHA4-204ENST00000618834 PRUNE2Q8WUY3 3088 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms