RNA–Protein interactions for RNA: ENST00000618777.4

CNTNAP3B-214, Transcript of contactin associated protein like 3B, humanhuman

TSL 1 (best)

Gene CNTNAP3B, Length 5,256 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-214ENST00000618777 WWC2-AS2Q96NR7 200 aa10.1□□□□□ -0.79
CNTNAP3B-214ENST00000618777 TNP2Q05952 138 aa10.09□□□□□ -0.79
CNTNAP3B-214ENST00000618777 SPRR1BP22528 89 aa10.08□□□□□ -0.8
CNTNAP3B-214ENST00000618777 K7EIL1 84 aa10.07□□□□□ -0.8
CNTNAP3B-214ENST00000618777 J3QL48 77 aa10.06□□□□□ -0.8
CNTNAP3B-214ENST00000618777 USP24Q9UPU5 2620 aa10.05□□□□□ -0.8
CNTNAP3B-214ENST00000618777 RANBP2P49792 3224 aaKnown RBP10.04□□□□□ -0.8
CNTNAP3B-214ENST00000618777 A0A087X002 238 aa10.03□□□□□ -0.8
CNTNAP3B-214ENST00000618777 H1FX-AS1Q4G0G2 97 aa10.03□□□□□ -0.8
CNTNAP3B-214ENST00000618777 S4R3F8 94 aa10.02□□□□□ -0.8
CNTNAP3B-214ENST00000618777 SMR3BP02814 79 aaPredicted RBP10.02□□□□□ -0.81
CNTNAP3B-214ENST00000618777 Q6ZSA8 131 aa10.01□□□□□ -0.81
CNTNAP3B-214ENST00000618777 FLG2Q5D862 2391 aaPredicted RBP10.01□□□□□ -0.81
CNTNAP3B-214ENST00000618777 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10□□□□□ -0.81
CNTNAP3B-214ENST00000618777 LCE6AA0A183 80 aa9.99□□□□□ -0.81
CNTNAP3B-214ENST00000618777 CHD7Q9P2D1 2997 aa9.99□□□□□ -0.81
CNTNAP3B-214ENST00000618777 Q6ZR54 194 aa9.99□□□□□ -0.81
CNTNAP3B-214ENST00000618777 KRTAP29-1A8MX34 341 aaPredicted RBP9.98□□□□□ -0.81
CNTNAP3B-214ENST00000618777 XIRP2A4UGR9 3374 aa9.97□□□□□ -0.81
CNTNAP3B-214ENST00000618777 KRTAP10-3P60369 221 aa9.96□□□□□ -0.81
CNTNAP3B-214ENST00000618777 KRTAP26-1Q6PEX3 210 aa9.95□□□□□ -0.82
CNTNAP3B-214ENST00000618777 CDH23Q9H251 3354 aa9.94□□□□□ -0.82
CNTNAP3B-214ENST00000618777 R4GN34 69 aa9.94□□□□□ -0.82
CNTNAP3B-214ENST00000618777 DNAH14Q0VDD8 3507 aa9.92□□□□□ -0.82
CNTNAP3B-214ENST00000618777 SEC61BP60468 96 aaKnown RBP9.92□□□□□ -0.82
CNTNAP3B-214ENST00000618777 PRRC2CQ9Y520 2896 aaKnown RBP9.87□□□□□ -0.83
CNTNAP3B-214ENST00000618777 MGAM2Q2M2H8 2515 aa9.86□□□□□ -0.83
CNTNAP3B-214ENST00000618777 PLAC8Q9NZF1 115 aa9.84□□□□□ -0.83
CNTNAP3B-214ENST00000618777 FASNP49327 2511 aaKnown RBP9.82□□□□□ -0.84
CNTNAP3B-214ENST00000618777 PRUNE2Q8WUY3 3088 aa9.81□□□□□ -0.84
CNTNAP3B-214ENST00000618777 DMBT1Q9UGM3 2413 aaPredicted RBP9.81□□□□□ -0.84
CNTNAP3B-214ENST00000618777 EPG5Q9HCE0 2579 aa9.77□□□□□ -0.85
CNTNAP3B-214ENST00000618777 A8MUU9 505 aa9.76□□□□□ -0.85
CNTNAP3B-214ENST00000618777 VCANP13611 3396 aa9.76□□□□□ -0.85
CNTNAP3B-214ENST00000618777 C20orf166-AS1Q96NR2 134 aa9.76□□□□□ -0.85
CNTNAP3B-214ENST00000618777 PANO1I0J062 215 aa9.74□□□□□ -0.85
CNTNAP3B-214ENST00000618777 M0QZ58 72 aa9.73□□□□□ -0.85
CNTNAP3B-214ENST00000618777 SPEGQ15772 3267 aa9.71□□□□□ -0.85
CNTNAP3B-214ENST00000618777 CHD9Q3L8U1 2897 aa9.71□□□□□ -0.86
CNTNAP3B-214ENST00000618777 TRIOO75962 3097 aa9.7□□□□□ -0.86
CNTNAP3B-214ENST00000618777 SZT2Q5T011 3432 aa9.69□□□□□ -0.86
CNTNAP3B-214ENST00000618777 KRTAP4-16G5E9R7 235 aaPredicted RBP9.69□□□□□ -0.86
CNTNAP3B-214ENST00000618777 CFAP54Q96N23 3096 aa9.68□□□□□ -0.86
CNTNAP3B-214ENST00000618777 PLAC4Q8WY50 150 aa9.66□□□□□ -0.86
CNTNAP3B-214ENST00000618777 ATRQ13535 2644 aa9.63□□□□□ -0.87
CNTNAP3B-214ENST00000618777 KRTAP11-1Q8IUC1 163 aa9.63□□□□□ -0.87
CNTNAP3B-214ENST00000618777 M0R2T5 61 aa9.6□□□□□ -0.87
CNTNAP3B-214ENST00000618777 CELSR3Q9NYQ7 3312 aa9.58□□□□□ -0.88
CNTNAP3B-214ENST00000618777 LAMA1P25391 3075 aa9.58□□□□□ -0.88
CNTNAP3B-214ENST00000618777 KRTAP1-3Q8IUG1 177 aa9.57□□□□□ -0.88
CNTNAP3B-214ENST00000618777 KRTAP1-1Q07627 177 aa9.55□□□□□ -0.88
CNTNAP3B-214ENST00000618777 VPS13AQ96RL7 3174 aa9.54□□□□□ -0.88
CNTNAP3B-214ENST00000618777 MYO15AQ9UKN7 3530 aa9.54□□□□□ -0.88
CNTNAP3B-214ENST00000618777 USP34Q70CQ2 3546 aa9.53□□□□□ -0.88
CNTNAP3B-214ENST00000618777 NBEAL1Q6ZS30 2694 aa9.52□□□□□ -0.88
CNTNAP3B-214ENST00000618777 MAST4O15021 2626 aa9.52□□□□□ -0.89
CNTNAP3B-214ENST00000618777 NOTCH2NLQ7Z3S9 236 aa9.51□□□□□ -0.89
CNTNAP3B-214ENST00000618777 HECTD1Q9ULT8 2610 aa9.5□□□□□ -0.89
CNTNAP3B-214ENST00000618777 AKAP13Q12802 2813 aa9.49□□□□□ -0.89
CNTNAP3B-214ENST00000618777 TRANK1O15050 2925 aa9.48□□□□□ -0.89
CNTNAP3B-214ENST00000618777 STAB1Q9NY15 2570 aa9.48□□□□□ -0.89
CNTNAP3B-214ENST00000618777 EYSQ5T1H1 3165 aa9.46□□□□□ -0.9
CNTNAP3B-214ENST00000618777 KRTAP1-5Q9BYS1 174 aa9.46□□□□□ -0.9
CNTNAP3B-214ENST00000618777 FLNAP21333 2647 aaKnown RBP9.42□□□□□ -0.9
CNTNAP3B-214ENST00000618777 WDFY4Q6ZS81 3184 aa9.39□□□□□ -0.91
CNTNAP3B-214ENST00000618777 STAB2Q8WWQ8 2551 aa9.39□□□□□ -0.91
CNTNAP3B-214ENST00000618777 FLNBO75369 2602 aaKnown RBP9.38□□□□□ -0.91
CNTNAP3B-214ENST00000618777 FRYLO94915 3013 aa9.35□□□□□ -0.91
CNTNAP3B-214ENST00000618777 ITPR3Q14573 2671 aa9.34□□□□□ -0.91
CNTNAP3B-214ENST00000618777 UNC79Q9P2D8 2635 aa9.33□□□□□ -0.92
CNTNAP3B-214ENST00000618777 CENPEQ02224 2701 aa9.32□□□□□ -0.92
CNTNAP3B-214ENST00000618777 NOTCH1P46531 2555 aa9.32□□□□□ -0.92
CNTNAP3B-214ENST00000618777 NBEAQ8NFP9 2946 aa9.32□□□□□ -0.92
CNTNAP3B-214ENST00000618777 CHD6Q8TD26 2715 aa9.32□□□□□ -0.92
CNTNAP3B-214ENST00000618777 SPTBN5Q9NRC6 3674 aaKnown RBP9.31□□□□□ -0.92
CNTNAP3B-214ENST00000618777 FREM2Q5SZK8 3169 aa9.3□□□□□ -0.92
CNTNAP3B-214ENST00000618777 FRYQ5TBA9 3013 aa9.28□□□□□ -0.92
CNTNAP3B-214ENST00000618777 REV3LO60673 3130 aa9.28□□□□□ -0.92
CNTNAP3B-214ENST00000618777 C10orf95Q9H7T3 257 aa9.24□□□□□ -0.93
CNTNAP3B-214ENST00000618777 KRTAP10-1P60331 282 aa9.24□□□□□ -0.93
CNTNAP3B-214ENST00000618777 RPS29P62273 56 aaKnown RBP9.23□□□□□ -0.93
CNTNAP3B-214ENST00000618777 DSPP15924 2871 aaKnown RBP9.22□□□□□ -0.93
CNTNAP3B-214ENST00000618777 P0C880 135 aa9.21□□□□□ -0.94
CNTNAP3B-214ENST00000618777 GCN1Q92616 2671 aaKnown RBP9.2□□□□□ -0.94
CNTNAP3B-214ENST00000618777 HELZ2Q9BYK8 2649 aaKnown RBP9.17□□□□□ -0.94
CNTNAP3B-214ENST00000618777 KRTAP10-2P60368 255 aa9.17□□□□□ -0.94
CNTNAP3B-214ENST00000618777 TNP1P09430 55 aa9.17□□□□□ -0.94
CNTNAP3B-214ENST00000618777 PP632Q6XCG6 107 aa9.16□□□□□ -0.94
CNTNAP3B-214ENST00000618777 KRTAP7-1Q8IUC3 87 aa9.14□□□□□ -0.95
CNTNAP3B-214ENST00000618777 MGAQ8IWI9 3026 aa9.14□□□□□ -0.95
CNTNAP3B-214ENST00000618777 H0YAA0 97 aa9.13□□□□□ -0.95
CNTNAP3B-214ENST00000618777 COL6A3P12111 3177 aa9.12□□□□□ -0.95
CNTNAP3B-214ENST00000618777 Q5VSD8 79 aa9.12□□□□□ -0.95
CNTNAP3B-214ENST00000618777 WDFY3Q8IZQ1 3526 aa9.09□□□□□ -0.95
CNTNAP3B-214ENST00000618777 KRTAP13-1Q8IUC0 172 aa9.09□□□□□ -0.95
CNTNAP3B-214ENST00000618777 CFAP46Q8IYW2 2715 aa9.09□□□□□ -0.95
CNTNAP3B-214ENST00000618777 COL6A5A8TX70 2615 aa9.08□□□□□ -0.96
CNTNAP3B-214ENST00000618777 BOD1L1Q8NFC6 3051 aa9.07□□□□□ -0.96
CNTNAP3B-214ENST00000618777 KRTAP13-2Q52LG2 175 aa9□□□□□ -0.97
CNTNAP3B-214ENST00000618777 NBEAL2Q6ZNJ1 2754 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms