RNA–Protein interactions for RNA: ENST00000617647.4

PDE6A-205, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best) BASIC

Gene PDE6A, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-205ENST00000617647 GIG44P09565 113 aaPredicted RBP4.7□□□□□ -1.66
PDE6A-205ENST00000617647 ABCA2Q9BZC7 2435 aa4.69□□□□□ -1.66
PDE6A-205ENST00000617647 MYO18BQ8IUG5 2567 aa4.69□□□□□ -1.66
PDE6A-205ENST00000617647 NCOR2Q9Y618 2525 aa4.69□□□□□ -1.66
PDE6A-205ENST00000617647 LRBAP50851 2863 aa4.69□□□□□ -1.66
PDE6A-205ENST00000617647 ASB16-AS1Q495Z4 193 aa4.69□□□□□ -1.66
PDE6A-205ENST00000617647 SSBP3-AS1Q7Z2R9 100 aa4.69□□□□□ -1.66
PDE6A-205ENST00000617647 FLNBO75369 2602 aaKnown RBP4.68□□□□□ -1.66
PDE6A-205ENST00000617647 SPTBN4Q9H254 2564 aa4.68□□□□□ -1.66
PDE6A-205ENST00000617647 DEFB131BA0A096LNP1 70 aa4.68□□□□□ -1.66
PDE6A-205ENST00000617647 CSNK1G2-AS1Q8NCQ2 148 aa4.68□□□□□ -1.66
PDE6A-205ENST00000617647 Q6ZR54 194 aa4.67□□□□□ -1.66
PDE6A-205ENST00000617647 C19orf73Q9NVV2 129 aa4.67□□□□□ -1.66
PDE6A-205ENST00000617647 PRR34Q9NV39 138 aa4.66□□□□□ -1.66
PDE6A-205ENST00000617647 POLQO75417 2590 aa4.66□□□□□ -1.66
PDE6A-205ENST00000617647 ABCA12Q86UK0 2595 aa4.66□□□□□ -1.66
PDE6A-205ENST00000617647 LRRK2Q5S007 2527 aa4.66□□□□□ -1.66
PDE6A-205ENST00000617647 A0A0A0MQY5 61 aa4.66□□□□□ -1.66
PDE6A-205ENST00000617647 KRTAP29-1A8MX34 341 aaPredicted RBP4.66□□□□□ -1.66
PDE6A-205ENST00000617647 C8orf17Q9NRJ1 99 aa4.66□□□□□ -1.66
PDE6A-205ENST00000617647 MRPL34Q9BQ48 92 aaKnown RBP4.65□□□□□ -1.67
PDE6A-205ENST00000617647 EPG5Q9HCE0 2579 aa4.65□□□□□ -1.67
PDE6A-205ENST00000617647 UBE2DNLQ8IWF7 75 aa4.65□□□□□ -1.67
PDE6A-205ENST00000617647 C15orf56Q8N910 161 aa4.65□□□□□ -1.67
PDE6A-205ENST00000617647 IGLV5-37A0A075B6J1 123 aa4.64□□□□□ -1.67
PDE6A-205ENST00000617647 NBEAL2Q6ZNJ1 2754 aa4.64□□□□□ -1.67
PDE6A-205ENST00000617647 MMP24-AS1A0A0U1RRL7 71 aa4.64□□□□□ -1.67
PDE6A-205ENST00000617647 ASH1LQ9NR48 2969 aaKnown RBP4.63□□□□□ -1.67
PDE6A-205ENST00000617647 GCN1Q92616 2671 aaKnown RBP4.63□□□□□ -1.67
PDE6A-205ENST00000617647 ROMO1P60602 79 aa4.62□□□□□ -1.67
PDE6A-205ENST00000617647 CRIPTQ9P021 101 aa4.62□□□□□ -1.67
PDE6A-205ENST00000617647 INAFM1C9JVW0 142 aa4.62□□□□□ -1.67
PDE6A-205ENST00000617647 SPATA8Q6RVD6 105 aa4.62□□□□□ -1.67
PDE6A-205ENST00000617647 CELSR1Q9NYQ6 3014 aa4.6□□□□□ -1.67
PDE6A-205ENST00000617647 AKAP9Q99996 3911 aa4.6□□□□□ -1.67
PDE6A-205ENST00000617647 RTL8CO15255 209 aa4.6□□□□□ -1.67
PDE6A-205ENST00000617647 CHD6Q8TD26 2715 aa4.6□□□□□ -1.67
PDE6A-205ENST00000617647 DOPEY1Q5JWR5 2465 aa4.6□□□□□ -1.67
PDE6A-205ENST00000617647 IGKV2D-30A0A075B6S6 120 aa4.6□□□□□ -1.67
PDE6A-205ENST00000617647 IGKV2-30P06310 120 aa4.6□□□□□ -1.67
PDE6A-205ENST00000617647 A0A1B0GVX0 72 aa4.58□□□□□ -1.68
PDE6A-205ENST00000617647 C14orf177Q52M58 125 aa4.58□□□□□ -1.68
PDE6A-205ENST00000617647 LINC00472Q9H8W2 130 aa4.57□□□□□ -1.68
PDE6A-205ENST00000617647 PLAC8Q9NZF1 115 aa4.57□□□□□ -1.68
PDE6A-205ENST00000617647 COL12A1Q99715 3063 aa4.57□□□□□ -1.68
PDE6A-205ENST00000617647 DNAH10OSP0CZ25 163 aa4.56□□□□□ -1.68
PDE6A-205ENST00000617647 FLG2Q5D862 2391 aaPredicted RBP4.56□□□□□ -1.68
PDE6A-205ENST00000617647 KRTAP25-1Q3LHN0 102 aa4.56□□□□□ -1.68
PDE6A-205ENST00000617647 ACANP16112 2415 aa4.55□□□□□ -1.68
PDE6A-205ENST00000617647 MAST4O15021 2626 aa4.55□□□□□ -1.68
PDE6A-205ENST00000617647 SPRR1AP35321 89 aa4.54□□□□□ -1.68
PDE6A-205ENST00000617647 KRTAP16-1A8MUX0 517 aa4.54□□□□□ -1.68
PDE6A-205ENST00000617647 K7EIL1 84 aa4.54□□□□□ -1.68
PDE6A-205ENST00000617647 LINC01556Q5JQF7 62 aa4.53□□□□□ -1.68
PDE6A-205ENST00000617647 A0A087X002 238 aa4.52□□□□□ -1.69
PDE6A-205ENST00000617647 CIRBP-AS1Q8TBR5 109 aa4.52□□□□□ -1.69
PDE6A-205ENST00000617647 TLX1NBP0CAT3 122 aa4.52□□□□□ -1.69
PDE6A-205ENST00000617647 KRTAP4-16G5E9R7 235 aaPredicted RBP4.51□□□□□ -1.69
PDE6A-205ENST00000617647 TEX15Q9BXT5 2789 aa4.51□□□□□ -1.69
PDE6A-205ENST00000617647 NDUFAF8A1L188 74 aa4.51□□□□□ -1.69
PDE6A-205ENST00000617647 ZNF861PO60384 105 aa4.51□□□□□ -1.69
PDE6A-205ENST00000617647 CENPEQ02224 2701 aa4.51□□□□□ -1.69
PDE6A-205ENST00000617647 NBPF19A0A087WUL8 3843 aa4.51□□□□□ -1.69
PDE6A-205ENST00000617647 APCP25054 2843 aa4.5□□□□□ -1.69
PDE6A-205ENST00000617647 CRYBG3Q68DQ2 2970 aa4.5□□□□□ -1.69
PDE6A-205ENST00000617647 CELSR2Q9HCU4 2923 aa4.5□□□□□ -1.69
PDE6A-205ENST00000617647 KRTAP10-9P60411 292 aa4.49□□□□□ -1.69
PDE6A-205ENST00000617647 NOTCH2Q04721 2471 aa4.49□□□□□ -1.69
PDE6A-205ENST00000617647 CHTF8P0CG12 524 aa4.49□□□□□ -1.69
PDE6A-205ENST00000617647 CSMD2Q7Z408 3487 aa4.49□□□□□ -1.69
PDE6A-205ENST00000617647 IGLV7-43P04211 117 aa4.49□□□□□ -1.69
PDE6A-205ENST00000617647 CASC10Q5T4H9 136 aa4.49□□□□□ -1.69
PDE6A-205ENST00000617647 KRTAP26-1Q6PEX3 210 aa4.48□□□□□ -1.69
PDE6A-205ENST00000617647 H3BNG1 76 aa4.48□□□□□ -1.69
PDE6A-205ENST00000617647 DMAC1Q96GE9 116 aa4.48□□□□□ -1.69
PDE6A-205ENST00000617647 A8MUU9 505 aa4.47□□□□□ -1.69
PDE6A-205ENST00000617647 SETXQ7Z333 2677 aaKnown RBP4.47□□□□□ -1.69
PDE6A-205ENST00000617647 HELZ2Q9BYK8 2649 aaKnown RBP4.45□□□□□ -1.7
PDE6A-205ENST00000617647 IGSF10Q6WRI0 2623 aa4.45□□□□□ -1.7
PDE6A-205ENST00000617647 CUBNO60494 3623 aa4.44□□□□□ -1.7
PDE6A-205ENST00000617647 FLNCQ14315 2725 aa4.44□□□□□ -1.7
PDE6A-205ENST00000617647 ZNF469Q96JG9 3925 aaPredicted RBP4.44□□□□□ -1.7
PDE6A-205ENST00000617647 Q5W150 140 aa4.44□□□□□ -1.7
PDE6A-205ENST00000617647 UTP20O75691 2785 aaKnown RBP4.44□□□□□ -1.7
PDE6A-205ENST00000617647 IGLV5-52A0A0A0MRZ9 124 aa4.43□□□□□ -1.7
PDE6A-205ENST00000617647 A0A1B0GU33 70 aa4.43□□□□□ -1.7
PDE6A-205ENST00000617647 Q8N1X5 172 aa4.43□□□□□ -1.7
PDE6A-205ENST00000617647 ANAPC11Q9NYG5 84 aa4.43□□□□□ -1.7
PDE6A-205ENST00000617647 CFAP46Q8IYW2 2715 aa4.43□□□□□ -1.7
PDE6A-205ENST00000617647 ANK3Q12955 4377 aaKnown RBP4.43□□□□□ -1.7
PDE6A-205ENST00000617647 LINC00483Q53H64 154 aa4.43□□□□□ -1.7
PDE6A-205ENST00000617647 LUZP6Q538Z0 58 aa4.42□□□□□ -1.7
PDE6A-205ENST00000617647 NOTCH2NLQ7Z3S9 236 aa4.42□□□□□ -1.7
PDE6A-205ENST00000617647 KRTAP1-3Q8IUG1 177 aa4.41□□□□□ -1.7
PDE6A-205ENST00000617647 DMBT1Q9UGM3 2413 aaPredicted RBP4.41□□□□□ -1.7
PDE6A-205ENST00000617647 NF1P21359 2839 aa4.41□□□□□ -1.7
PDE6A-205ENST00000617647 NUPR2A6NF83 97 aa4.4□□□□□ -1.7
PDE6A-205ENST00000617647 LY6G6CO95867 125 aa4.4□□□□□ -1.7
PDE6A-205ENST00000617647 SPRR1BP22528 89 aa4.39□□□□□ -1.71
PDE6A-205ENST00000617647 LINC00304Q8N9R0 145 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms