RNA–Protein interactions for RNA: ENST00000617271.4

PCDH15-231, Transcript of protocadherin related 15, human

APPRIS P3 TSL 5 BASIC

Gene PCDH15, Length 6,425 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCDH15-231	ENST00000617271	TLN2	Q9Y4G6	2542 aa		4.16	□□□□□ -1.74
PCDH15-231	ENST00000617271	ANKRD11	Q6UB99	2663 aa	Predicted RBP	4.15	□□□□□ -1.75
PCDH15-231	ENST00000617271	TNP1	P09430	55 aa		4.15	□□□□□ -1.75
PCDH15-231	ENST00000617271	NOTCH2NL	Q7Z3S9	236 aa		4.15	□□□□□ -1.75
PCDH15-231	ENST00000617271	KRTAP25-1	Q3LHN0	102 aa		4.12	□□□□□ -1.75
PCDH15-231	ENST00000617271	KRTAP13-2	Q52LG2	175 aa		4.12	□□□□□ -1.75
PCDH15-231	ENST00000617271	KRTAP13-1	Q8IUC0	172 aa		4.12	□□□□□ -1.75
PCDH15-231	ENST00000617271	PKD1L2	Q7Z442	2459 aa		4.11	□□□□□ -1.75
PCDH15-231	ENST00000617271	FASN	P49327	2511 aa	Known RBP	4.1	□□□□□ -1.75
PCDH15-231	ENST00000617271	KRTAP11-1	Q8IUC1	163 aa		4.08	□□□□□ -1.76
PCDH15-231	ENST00000617271	CHD8	Q9HCK8	2581 aa		4.07	□□□□□ -1.76
PCDH15-231	ENST00000617271	KRTAP16-1	A8MUX0	517 aa		4.07	□□□□□ -1.76
PCDH15-231	ENST00000617271	PP632	Q6XCG6	107 aa		4.06	□□□□□ -1.76
PCDH15-231	ENST00000617271		A8MU10	97 aa		4.06	□□□□□ -1.76
PCDH15-231	ENST00000617271	BPTF	Q12830	3046 aa		4.04	□□□□□ -1.76
PCDH15-231	ENST00000617271	KRTAP7-1	Q8IUC3	87 aa		4.04	□□□□□ -1.76
PCDH15-231	ENST00000617271	USP34	Q70CQ2	3546 aa		4.04	□□□□□ -1.76
PCDH15-231	ENST00000617271	GOLGB1	Q14789	3259 aa	Known RBP	4.04	□□□□□ -1.76
PCDH15-231	ENST00000617271		A6NN06	94 aa		4.03	□□□□□ -1.76
PCDH15-231	ENST00000617271	USP9Y	O00507	2555 aa	Predicted RBP	4.03	□□□□□ -1.76
PCDH15-231	ENST00000617271	CEP295	Q9C0D2	2601 aa		4.03	□□□□□ -1.77
PCDH15-231	ENST00000617271	ACAN	P16112	2415 aa		4.02	□□□□□ -1.77
PCDH15-231	ENST00000617271	MTOR	P42345	2549 aa		4.02	□□□□□ -1.77
PCDH15-231	ENST00000617271	POLQ	O75417	2590 aa		4	□□□□□ -1.77
PCDH15-231	ENST00000617271	C10orf95	Q9H7T3	257 aa		4	□□□□□ -1.77
PCDH15-231	ENST00000617271	PRO2289	Q9P1D8	64 aa		3.99	□□□□□ -1.77
PCDH15-231	ENST00000617271	TPRXL	Q17RH7	258 aa		3.98	□□□□□ -1.77
PCDH15-231	ENST00000617271	XP32	Q5T750	250 aa		3.98	□□□□□ -1.77
PCDH15-231	ENST00000617271	KRTAP10-8	P60410	259 aa		3.96	□□□□□ -1.77
PCDH15-231	ENST00000617271	PCNT	O95613	3336 aa		3.96	□□□□□ -1.78
PCDH15-231	ENST00000617271	SPTBN4	Q9H254	2564 aa		3.95	□□□□□ -1.78
PCDH15-231	ENST00000617271	SETD2	Q9BYW2	2564 aa	Predicted RBP	3.92	□□□□□ -1.78
PCDH15-231	ENST00000617271	NDUFAF8	A1L188	74 aa		3.9	□□□□□ -1.78
PCDH15-231	ENST00000617271	KRTAP1-4	P0C5Y4	121 aa		3.9	□□□□□ -1.78
PCDH15-231	ENST00000617271		A0A1B0GVY2	172 aa		3.9	□□□□□ -1.79
PCDH15-231	ENST00000617271	KRTAP10-10	P60014	251 aa		3.9	□□□□□ -1.79
PCDH15-231	ENST00000617271	HECTD1	Q9ULT8	2610 aa		3.87	□□□□□ -1.79
PCDH15-231	ENST00000617271	FLNA	P21333	2647 aa	Known RBP	3.87	□□□□□ -1.79
PCDH15-231	ENST00000617271	EP400	Q96L91	3159 aa		3.86	□□□□□ -1.79
PCDH15-231	ENST00000617271	KRTAP13-3	Q3SY46	172 aa		3.83	□□□□□ -1.8
PCDH15-231	ENST00000617271	ITPR3	Q14573	2671 aa		3.82	□□□□□ -1.8
PCDH15-231	ENST00000617271		P0C880	135 aa		3.8	□□□□□ -1.8
PCDH15-231	ENST00000617271	MGAM2	Q2M2H8	2515 aa		3.8	□□□□□ -1.8
PCDH15-231	ENST00000617271	EPG5	Q9HCE0	2579 aa		3.79	□□□□□ -1.8
PCDH15-231	ENST00000617271	WDR87	Q6ZQQ6	2873 aa		3.79	□□□□□ -1.8
PCDH15-231	ENST00000617271	CENPF	P49454	3210 aa		3.79	□□□□□ -1.8
PCDH15-231	ENST00000617271	HELZ2	Q9BYK8	2649 aa	Known RBP	3.77	□□□□□ -1.81
PCDH15-231	ENST00000617271		H0YAA0	97 aa		3.77	□□□□□ -1.81
PCDH15-231	ENST00000617271	ATR	Q13535	2644 aa		3.72	□□□□□ -1.81
PCDH15-231	ENST00000617271	UTRN	P46939	3433 aa		3.7	□□□□□ -1.82
PCDH15-231	ENST00000617271	SRCAP	Q6ZRS2	3230 aa		3.7	□□□□□ -1.82
PCDH15-231	ENST00000617271	KMT2B	Q9UMN6	2715 aa	Predicted RBP	3.7	□□□□□ -1.82
PCDH15-231	ENST00000617271	MAST4	O15021	2626 aa		3.69	□□□□□ -1.82
PCDH15-231	ENST00000617271	COL6A3	P12111	3177 aa		3.68	□□□□□ -1.82
PCDH15-231	ENST00000617271	USP24	Q9UPU5	2620 aa		3.68	□□□□□ -1.82
PCDH15-231	ENST00000617271		A0A0C4DFX4	3053 aa		3.68	□□□□□ -1.82
PCDH15-231	ENST00000617271	SZT2	Q5T011	3432 aa		3.67	□□□□□ -1.82
PCDH15-231	ENST00000617271	DMBT1	Q9UGM3	2413 aa	Predicted RBP	3.66	□□□□□ -1.82
PCDH15-231	ENST00000617271	FLNB	O75369	2602 aa	Known RBP	3.66	□□□□□ -1.82
PCDH15-231	ENST00000617271	KRTAP13-4	Q3LI77	160 aa		3.64	□□□□□ -1.83
PCDH15-231	ENST00000617271	XIRP2	A4UGR9	3374 aa		3.62	□□□□□ -1.83
PCDH15-231	ENST00000617271	CFAP46	Q8IYW2	2715 aa		3.6	□□□□□ -1.83
PCDH15-231	ENST00000617271	FLG2	Q5D862	2391 aa	Predicted RBP	3.59	□□□□□ -1.84
PCDH15-231	ENST00000617271	STAB1	Q9NY15	2570 aa		3.58	□□□□□ -1.84
PCDH15-231	ENST00000617271	KRTAP12-2	P59991	146 aa		3.57	□□□□□ -1.84
PCDH15-231	ENST00000617271	NBEAL1	Q6ZS30	2694 aa		3.57	□□□□□ -1.84
PCDH15-231	ENST00000617271	VCAN	P13611	3396 aa		3.55	□□□□□ -1.84
PCDH15-231	ENST00000617271	KRTAP15-1	Q3LI76	137 aa		3.54	□□□□□ -1.84
PCDH15-231	ENST00000617271	TEP1	Q99973	2627 aa	Known RBP	3.54	□□□□□ -1.84
PCDH15-231	ENST00000617271	CENPE	Q02224	2701 aa		3.53	□□□□□ -1.84
PCDH15-231	ENST00000617271	BAHCC1	Q9P281	2608 aa		3.53	□□□□□ -1.84
PCDH15-231	ENST00000617271	RANBP2	P49792	3224 aa	Known RBP	3.51	□□□□□ -1.85
PCDH15-231	ENST00000617271	KRTAP12-1	P59990	96 aa		3.51	□□□□□ -1.85
PCDH15-231	ENST00000617271	DNAH14	Q0VDD8	3507 aa		3.5	□□□□□ -1.85
PCDH15-231	ENST00000617271	WDFY3	Q8IZQ1	3526 aa		3.5	□□□□□ -1.85
PCDH15-231	ENST00000617271	UNC80	Q8N2C7	3258 aa		3.49	□□□□□ -1.85
PCDH15-231	ENST00000617271	UNC79	Q9P2D8	2635 aa		3.49	□□□□□ -1.85
PCDH15-231	ENST00000617271	TEX15	Q9BXT5	2789 aa		3.47	□□□□□ -1.85
PCDH15-231	ENST00000617271	NSD1	Q96L73	2696 aa	Predicted RBP	3.47	□□□□□ -1.85
PCDH15-231	ENST00000617271	SPTBN5	Q9NRC6	3674 aa	Known RBP	3.46	□□□□□ -1.86
PCDH15-231	ENST00000617271	ITPR2	Q14571	2701 aa		3.46	□□□□□ -1.86
PCDH15-231	ENST00000617271	ZFHX3	Q15911	3703 aa		3.45	□□□□□ -1.86
PCDH15-231	ENST00000617271	COL6A5	A8TX70	2615 aa		3.44	□□□□□ -1.86
PCDH15-231	ENST00000617271	CEP350	Q5VT06	3117 aa		3.44	□□□□□ -1.86
PCDH15-231	ENST00000617271	GCN1	Q92616	2671 aa	Known RBP	3.43	□□□□□ -1.86
PCDH15-231	ENST00000617271	SETX	Q7Z333	2677 aa	Known RBP	3.43	□□□□□ -1.86
PCDH15-231	ENST00000617271	IGSF10	Q6WRI0	2623 aa		3.42	□□□□□ -1.86
PCDH15-231	ENST00000617271	CFAP54	Q96N23	3096 aa		3.41	□□□□□ -1.86
PCDH15-231	ENST00000617271	CHD6	Q8TD26	2715 aa		3.4	□□□□□ -1.87
PCDH15-231	ENST00000617271	KRTAP3-1	Q9BYR8	98 aa		3.4	□□□□□ -1.87
PCDH15-231	ENST00000617271	DNAH12	Q6ZR08	3092 aa		3.4	□□□□□ -1.87
PCDH15-231	ENST00000617271	STAB2	Q8WWQ8	2551 aa		3.39	□□□□□ -1.87
PCDH15-231	ENST00000617271	BRCA2	P51587	3418 aa		3.39	□□□□□ -1.87
PCDH15-231	ENST00000617271	ZNF292	O60281	2723 aa		3.39	□□□□□ -1.87
PCDH15-231	ENST00000617271	INE1	O15225	51 aa		3.38	□□□□□ -1.87
PCDH15-231	ENST00000617271	CDH23	Q9H251	3354 aa		3.37	□□□□□ -1.87
PCDH15-231	ENST00000617271	AKAP13	Q12802	2813 aa		3.37	□□□□□ -1.87
PCDH15-231	ENST00000617271	DMD	P11532	3685 aa		3.37	□□□□□ -1.87
PCDH15-231	ENST00000617271	KRTAP10-12	P60413	245 aa		3.37	□□□□□ -1.87
PCDH15-231	ENST00000617271	CHD9	Q3L8U1	2897 aa		3.36	□□□□□ -1.87

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