RNA–Protein interactions for RNA: ENST00000616179.4

SYNRG-223, Transcript of synergin gamma, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SYNRG, Length 4,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-223ENST00000616179 LINC00588Q9Y4M8 146 aa10.03□□□□□ -0.8
SYNRG-223ENST00000616179 CASC10Q5T4H9 136 aa10.02□□□□□ -0.81
SYNRG-223ENST00000616179 ZCCHC13Q8WW36 166 aaKnown RBP10.01□□□□□ -0.81
SYNRG-223ENST00000616179 SPRR4Q96PI1 79 aa10□□□□□ -0.81
SYNRG-223ENST00000616179 INAFM1C9JVW0 142 aa10□□□□□ -0.81
SYNRG-223ENST00000616179 KRTAP10-3P60369 221 aa10□□□□□ -0.81
SYNRG-223ENST00000616179 LINC01556Q5JQF7 62 aa9.98□□□□□ -0.81
SYNRG-223ENST00000616179 C7orf65Q6ZTY9 151 aa9.97□□□□□ -0.81
SYNRG-223ENST00000616179 LCA10Q71F78 164 aa9.97□□□□□ -0.81
SYNRG-223ENST00000616179 A8MWP4 228 aa9.96□□□□□ -0.82
SYNRG-223ENST00000616179 H3BPC8 53 aa9.96□□□□□ -0.82
SYNRG-223ENST00000616179 RETNLBQ9BQ08 111 aa9.95□□□□□ -0.82
SYNRG-223ENST00000616179 PRAC1Q96KF2 57 aa9.94□□□□□ -0.82
SYNRG-223ENST00000616179 CDC42SE1Q9NRR8 79 aa9.94□□□□□ -0.82
SYNRG-223ENST00000616179 SPANXA2-OT1Q8N9U9 137 aa9.93□□□□□ -0.82
SYNRG-223ENST00000616179 FLNBO75369 2602 aaKnown RBP9.93□□□□□ -0.82
SYNRG-223ENST00000616179 CHTF8P0CG12 524 aa9.92□□□□□ -0.82
SYNRG-223ENST00000616179 PHF5AQ7RTV0 110 aaKnown RBP9.92□□□□□ -0.82
SYNRG-223ENST00000616179 MAST4O15021 2626 aa9.92□□□□□ -0.82
SYNRG-223ENST00000616179 MGAM2Q2M2H8 2515 aa9.91□□□□□ -0.82
SYNRG-223ENST00000616179 NBEAL1Q6ZS30 2694 aa9.91□□□□□ -0.82
SYNRG-223ENST00000616179 PRR26Q8N8Z3 221 aa9.9□□□□□ -0.82
SYNRG-223ENST00000616179 Q75L30 129 aa9.9□□□□□ -0.83
SYNRG-223ENST00000616179 ITPR2Q14571 2701 aa9.9□□□□□ -0.83
SYNRG-223ENST00000616179 SPINK7P58062 85 aa9.89□□□□□ -0.83
SYNRG-223ENST00000616179 CNBPP62633 177 aaKnown RBP9.89□□□□□ -0.83
SYNRG-223ENST00000616179 TNP2Q05952 138 aa9.89□□□□□ -0.83
SYNRG-223ENST00000616179 LCE6AA0A183 80 aa9.87□□□□□ -0.83
SYNRG-223ENST00000616179 MOBPQ13875 183 aa9.87□□□□□ -0.83
SYNRG-223ENST00000616179 MDFIQ99750 246 aa9.87□□□□□ -0.83
SYNRG-223ENST00000616179 KRTAP1-3Q8IUG1 177 aa9.87□□□□□ -0.83
SYNRG-223ENST00000616179 VWFP04275 2813 aa9.86□□□□□ -0.83
SYNRG-223ENST00000616179 KRTAP26-1Q6PEX3 210 aa9.86□□□□□ -0.83
SYNRG-223ENST00000616179 PDZD2O15018 2839 aa9.86□□□□□ -0.83
SYNRG-223ENST00000616179 IGLV8-61A0A075B6I0 122 aa9.82□□□□□ -0.84
SYNRG-223ENST00000616179 IGLV7-46A0A075B6I9 117 aa9.82□□□□□ -0.84
SYNRG-223ENST00000616179 C4orf48Q5BLP8 95 aa9.81□□□□□ -0.84
SYNRG-223ENST00000616179 TP53AIP1Q9HCN2 124 aa9.81□□□□□ -0.84
SYNRG-223ENST00000616179 NSD1Q96L73 2696 aaPredicted RBP9.8□□□□□ -0.84
SYNRG-223ENST00000616179 A0A1B0GU69 56 aa9.8□□□□□ -0.84
SYNRG-223ENST00000616179 H3BNG1 76 aa9.8□□□□□ -0.84
SYNRG-223ENST00000616179 SPRR1AP35321 89 aa9.8□□□□□ -0.84
SYNRG-223ENST00000616179 TLX1NBP0CAT3 122 aa9.79□□□□□ -0.84
SYNRG-223ENST00000616179 PKD1L1Q8TDX9 2849 aa9.79□□□□□ -0.84
SYNRG-223ENST00000616179 KRTAP4-16G5E9R7 235 aaPredicted RBP9.78□□□□□ -0.84
SYNRG-223ENST00000616179 PLA2G2DQ9UNK4 145 aa9.78□□□□□ -0.84
SYNRG-223ENST00000616179 DNAH10OSP0CZ25 163 aa9.78□□□□□ -0.84
SYNRG-223ENST00000616179 LINC00313P59037 77 aa9.78□□□□□ -0.84
SYNRG-223ENST00000616179 C8orf17Q9NRJ1 99 aa9.76□□□□□ -0.85
SYNRG-223ENST00000616179 A6NN06 94 aa9.76□□□□□ -0.85
SYNRG-223ENST00000616179 KRTAP29-1A8MX34 341 aaPredicted RBP9.75□□□□□ -0.85
SYNRG-223ENST00000616179 SPINK1P00995 79 aa9.75□□□□□ -0.85
SYNRG-223ENST00000616179 LINC01558Q9Y6Z2 57 aa9.75□□□□□ -0.85
SYNRG-223ENST00000616179 STAB1Q9NY15 2570 aa9.75□□□□□ -0.85
SYNRG-223ENST00000616179 C8orf87E5RJ46 101 aa9.74□□□□□ -0.85
SYNRG-223ENST00000616179 HRES1P13985 223 aa9.74□□□□□ -0.85
SYNRG-223ENST00000616179 MMP24-AS1A0A0U1RRL7 71 aa9.73□□□□□ -0.85
SYNRG-223ENST00000616179 KRTAP1-1Q07627 177 aa9.73□□□□□ -0.85
SYNRG-223ENST00000616179 ANAPC11Q9NYG5 84 aa9.73□□□□□ -0.85
SYNRG-223ENST00000616179 ACYP2P14621 99 aa9.72□□□□□ -0.85
SYNRG-223ENST00000616179 C9orf163Q8N9P6 203 aa9.72□□□□□ -0.85
SYNRG-223ENST00000616179 CIRBP-AS1Q8TBR5 109 aa9.72□□□□□ -0.85
SYNRG-223ENST00000616179 IGLV5-37A0A075B6J1 123 aa9.71□□□□□ -0.86
SYNRG-223ENST00000616179 MRPL34Q9BQ48 92 aaKnown RBP9.71□□□□□ -0.86
SYNRG-223ENST00000616179 H3BS24 57 aa9.71□□□□□ -0.86
SYNRG-223ENST00000616179 KRTAP7-1Q8IUC3 87 aa9.7□□□□□ -0.86
SYNRG-223ENST00000616179 LINC00472Q9H8W2 130 aa9.7□□□□□ -0.86
SYNRG-223ENST00000616179 ADM2Q7Z4H4 148 aa9.7□□□□□ -0.86
SYNRG-223ENST00000616179 C14orf177Q52M58 125 aa9.67□□□□□ -0.86
SYNRG-223ENST00000616179 NBPF19A0A087WUL8 3843 aa9.67□□□□□ -0.86
SYNRG-223ENST00000616179 J3QKU1 62 aa9.66□□□□□ -0.86
SYNRG-223ENST00000616179 KRTAP10-11P60412 298 aa9.66□□□□□ -0.86
SYNRG-223ENST00000616179 K7EIL1 84 aa9.66□□□□□ -0.86
SYNRG-223ENST00000616179 TENM3Q9P273 2699 aa9.65□□□□□ -0.86
SYNRG-223ENST00000616179 A0A1B0GVX0 72 aa9.64□□□□□ -0.87
SYNRG-223ENST00000616179 TENM1Q9UKZ4 2725 aa9.64□□□□□ -0.87
SYNRG-223ENST00000616179 SRRM2Q9UQ35 2752 aaKnown RBP9.64□□□□□ -0.87
SYNRG-223ENST00000616179 LINC01554Q52M75 96 aa9.63□□□□□ -0.87
SYNRG-223ENST00000616179 IGKV2D-30A0A075B6S6 120 aa9.63□□□□□ -0.87
SYNRG-223ENST00000616179 IGKV2-30P06310 120 aa9.63□□□□□ -0.87
SYNRG-223ENST00000616179 MIR22HGQ0VDD5 57 aa9.61□□□□□ -0.87
SYNRG-223ENST00000616179 UQCR11O14957 56 aa9.57□□□□□ -0.88
SYNRG-223ENST00000616179 AKAP9Q99996 3911 aa9.57□□□□□ -0.88
SYNRG-223ENST00000616179 ZNF706Q9Y5V0 76 aaPredicted RBP9.56□□□□□ -0.88
SYNRG-223ENST00000616179 KRTAP11-1Q8IUC1 163 aa9.55□□□□□ -0.88
SYNRG-223ENST00000616179 A0A087X002 238 aa9.52□□□□□ -0.89
SYNRG-223ENST00000616179 CSAG1Q6PB30 78 aa9.52□□□□□ -0.89
SYNRG-223ENST00000616179 NOTCH2NLQ7Z3S9 236 aa9.52□□□□□ -0.89
SYNRG-223ENST00000616179 FLG2Q5D862 2391 aaPredicted RBP9.51□□□□□ -0.89
SYNRG-223ENST00000616179 RTL8CO15255 209 aa9.49□□□□□ -0.89
SYNRG-223ENST00000616179 FBN1P35555 2871 aaKnown RBP9.48□□□□□ -0.89
SYNRG-223ENST00000616179 STAB2Q8WWQ8 2551 aa9.47□□□□□ -0.89
SYNRG-223ENST00000616179 KRTAP1-5Q9BYS1 174 aa9.44□□□□□ -0.9
SYNRG-223ENST00000616179 ZNF469Q96JG9 3925 aaPredicted RBP9.44□□□□□ -0.9
SYNRG-223ENST00000616179 Q5W150 140 aa9.43□□□□□ -0.9
SYNRG-223ENST00000616179 DMBT1Q9UGM3 2413 aaPredicted RBP9.43□□□□□ -0.9
SYNRG-223ENST00000616179 Q6ZR54 194 aa9.42□□□□□ -0.9
SYNRG-223ENST00000616179 SPRR1BP22528 89 aa9.41□□□□□ -0.9
SYNRG-223ENST00000616179 TRRAPQ9Y4A5 3859 aa9.41□□□□□ -0.9
SYNRG-223ENST00000616179 PANO1I0J062 215 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms