RNA–Protein interactions for RNA: ENST00000615877.4

NLRC3-204, Transcript of NLR family CARD domain containing 3, humanhuman

TSL 2

Gene NLRC3, Length 6,602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3-204ENST00000615877 KRTAP10-1P60331 282 aa8□□□□□ -1.13
NLRC3-204ENST00000615877 KRTAP10-2P60368 255 aa8□□□□□ -1.13
NLRC3-204ENST00000615877 M0QZ58 72 aa7.99□□□□□ -1.13
NLRC3-204ENST00000615877 ROMO1P60602 79 aa7.98□□□□□ -1.13
NLRC3-204ENST00000615877 PLAC4Q8WY50 150 aa7.97□□□□□ -1.13
NLRC3-204ENST00000615877 RPL37P61927 97 aaKnown RBP7.95□□□□□ -1.14
NLRC3-204ENST00000615877 LCE6AA0A183 80 aa7.94□□□□□ -1.14
NLRC3-204ENST00000615877 H1FX-AS1Q4G0G2 97 aa7.94□□□□□ -1.14
NLRC3-204ENST00000615877 Q6ZR54 194 aa7.94□□□□□ -1.14
NLRC3-204ENST00000615877 KRTAP1-5Q9BYS1 174 aa7.94□□□□□ -1.14
NLRC3-204ENST00000615877 CEP350Q5VT06 3117 aa7.92□□□□□ -1.14
NLRC3-204ENST00000615877 ADM2Q7Z4H4 148 aa7.92□□□□□ -1.14
NLRC3-204ENST00000615877 ASB16-AS1Q495Z4 193 aa7.92□□□□□ -1.14
NLRC3-204ENST00000615877 BPTFQ12830 3046 aa7.91□□□□□ -1.14
NLRC3-204ENST00000615877 KRTAP29-1A8MX34 341 aaPredicted RBP7.9□□□□□ -1.14
NLRC3-204ENST00000615877 KRTAP4-16G5E9R7 235 aaPredicted RBP7.87□□□□□ -1.15
NLRC3-204ENST00000615877 MKI67P46013 3256 aaKnown RBP7.86□□□□□ -1.15
NLRC3-204ENST00000615877 SPATA8Q6RVD6 105 aa7.84□□□□□ -1.15
NLRC3-204ENST00000615877 PRRC2CQ9Y520 2896 aaKnown RBP7.83□□□□□ -1.16
NLRC3-204ENST00000615877 USP24Q9UPU5 2620 aa7.83□□□□□ -1.16
NLRC3-204ENST00000615877 BRCA2P51587 3418 aa7.82□□□□□ -1.16
NLRC3-204ENST00000615877 XIRP2A4UGR9 3374 aa7.8□□□□□ -1.16
NLRC3-204ENST00000615877 A6NN06 94 aa7.79□□□□□ -1.16
NLRC3-204ENST00000615877 HECTD1Q9ULT8 2610 aa7.78□□□□□ -1.16
NLRC3-204ENST00000615877 PANO1I0J062 215 aa7.78□□□□□ -1.16
NLRC3-204ENST00000615877 MGAM2Q2M2H8 2515 aa7.75□□□□□ -1.17
NLRC3-204ENST00000615877 A0A087X002 238 aa7.73□□□□□ -1.17
NLRC3-204ENST00000615877 NOTCH2NLQ7Z3S9 236 aa7.73□□□□□ -1.17
NLRC3-204ENST00000615877 EPG5Q9HCE0 2579 aa7.71□□□□□ -1.18
NLRC3-204ENST00000615877 KRTAP25-1Q3LHN0 102 aa7.71□□□□□ -1.18
NLRC3-204ENST00000615877 FLNAP21333 2647 aaKnown RBP7.68□□□□□ -1.18
NLRC3-204ENST00000615877 LAMA3Q16787 3333 aa7.68□□□□□ -1.18
NLRC3-204ENST00000615877 HTTP42858 3142 aa7.67□□□□□ -1.18
NLRC3-204ENST00000615877 KRTAP16-1A8MUX0 517 aa7.66□□□□□ -1.18
NLRC3-204ENST00000615877 CHD7Q9P2D1 2997 aa7.64□□□□□ -1.19
NLRC3-204ENST00000615877 CDH23Q9H251 3354 aa7.64□□□□□ -1.19
NLRC3-204ENST00000615877 A8MU10 97 aa7.63□□□□□ -1.19
NLRC3-204ENST00000615877 C20orf166-AS1Q96NR2 134 aa7.62□□□□□ -1.19
NLRC3-204ENST00000615877 KRTAP11-1Q8IUC1 163 aa7.61□□□□□ -1.19
NLRC3-204ENST00000615877 ITPR3Q14573 2671 aa7.61□□□□□ -1.19
NLRC3-204ENST00000615877 A8MUU9 505 aa7.59□□□□□ -1.19
NLRC3-204ENST00000615877 PRUNE2Q8WUY3 3088 aa7.58□□□□□ -1.2
NLRC3-204ENST00000615877 KRTAP7-1Q8IUC3 87 aa7.56□□□□□ -1.2
NLRC3-204ENST00000615877 DNAH14Q0VDD8 3507 aa7.56□□□□□ -1.2
NLRC3-204ENST00000615877 ATRQ13535 2644 aa7.56□□□□□ -1.2
NLRC3-204ENST00000615877 FLNBO75369 2602 aaKnown RBP7.56□□□□□ -1.2
NLRC3-204ENST00000615877 SZT2Q5T011 3432 aa7.55□□□□□ -1.2
NLRC3-204ENST00000615877 CHD9Q3L8U1 2897 aa7.53□□□□□ -1.2
NLRC3-204ENST00000615877 RANBP2P49792 3224 aaKnown RBP7.52□□□□□ -1.21
NLRC3-204ENST00000615877 CELSR3Q9NYQ7 3312 aa7.51□□□□□ -1.21
NLRC3-204ENST00000615877 RPS29P62273 56 aaKnown RBP7.5□□□□□ -1.21
NLRC3-204ENST00000615877 UNC80Q8N2C7 3258 aa7.5□□□□□ -1.21
NLRC3-204ENST00000615877 NDUFAF8A1L188 74 aa7.5□□□□□ -1.21
NLRC3-204ENST00000615877 FLG2Q5D862 2391 aaPredicted RBP7.47□□□□□ -1.21
NLRC3-204ENST00000615877 KRTAP13-1Q8IUC0 172 aa7.45□□□□□ -1.22
NLRC3-204ENST00000615877 Q6ZRN7 208 aaPredicted RBP7.44□□□□□ -1.22
NLRC3-204ENST00000615877 A0A0C4DFX4 3053 aa7.44□□□□□ -1.22
NLRC3-204ENST00000615877 KRTAP13-2Q52LG2 175 aa7.43□□□□□ -1.22
NLRC3-204ENST00000615877 HELZ2Q9BYK8 2649 aaKnown RBP7.43□□□□□ -1.22
NLRC3-204ENST00000615877 CFAP54Q96N23 3096 aa7.42□□□□□ -1.22
NLRC3-204ENST00000615877 A0A1B0GVY2 172 aa7.42□□□□□ -1.22
NLRC3-204ENST00000615877 MAST4O15021 2626 aa7.42□□□□□ -1.22
NLRC3-204ENST00000615877 LAMA2P24043 3122 aaKnown RBP7.42□□□□□ -1.22
NLRC3-204ENST00000615877 CHD6Q8TD26 2715 aa7.39□□□□□ -1.23
NLRC3-204ENST00000615877 CFAP46Q8IYW2 2715 aa7.38□□□□□ -1.23
NLRC3-204ENST00000615877 TRANK1O15050 2925 aa7.37□□□□□ -1.23
NLRC3-204ENST00000615877 C10orf95Q9H7T3 257 aa7.37□□□□□ -1.23
NLRC3-204ENST00000615877 TRIOO75962 3097 aa7.36□□□□□ -1.23
NLRC3-204ENST00000615877 NBEAL1Q6ZS30 2694 aa7.36□□□□□ -1.23
NLRC3-204ENST00000615877 AKAP13Q12802 2813 aa7.35□□□□□ -1.23
NLRC3-204ENST00000615877 GCN1Q92616 2671 aaKnown RBP7.34□□□□□ -1.23
NLRC3-204ENST00000615877 DMBT1Q9UGM3 2413 aaPredicted RBP7.33□□□□□ -1.24
NLRC3-204ENST00000615877 TNP1P09430 55 aa7.32□□□□□ -1.24
NLRC3-204ENST00000615877 UNC79Q9P2D8 2635 aa7.31□□□□□ -1.24
NLRC3-204ENST00000615877 KRTAP10-8P60410 259 aa7.29□□□□□ -1.24
NLRC3-204ENST00000615877 SPTBN5Q9NRC6 3674 aaKnown RBP7.28□□□□□ -1.24
NLRC3-204ENST00000615877 COL6A3P12111 3177 aa7.28□□□□□ -1.24
NLRC3-204ENST00000615877 MGAQ8IWI9 3026 aa7.26□□□□□ -1.25
NLRC3-204ENST00000615877 TEX15Q9BXT5 2789 aa7.26□□□□□ -1.25
NLRC3-204ENST00000615877 CENPEQ02224 2701 aa7.24□□□□□ -1.25
NLRC3-204ENST00000615877 WDFY4Q6ZS81 3184 aa7.23□□□□□ -1.25
NLRC3-204ENST00000615877 USP34Q70CQ2 3546 aa7.22□□□□□ -1.25
NLRC3-204ENST00000615877 STAB1Q9NY15 2570 aa7.21□□□□□ -1.25
NLRC3-204ENST00000615877 VCANP13611 3396 aa7.21□□□□□ -1.26
NLRC3-204ENST00000615877 NBEAL2Q6ZNJ1 2754 aa7.21□□□□□ -1.26
NLRC3-204ENST00000615877 EYSQ5T1H1 3165 aa7.15□□□□□ -1.27
NLRC3-204ENST00000615877 H0YAA0 97 aa7.14□□□□□ -1.27
NLRC3-204ENST00000615877 VPS13AQ96RL7 3174 aa7.14□□□□□ -1.27
NLRC3-204ENST00000615877 TEP1Q99973 2627 aaKnown RBP7.12□□□□□ -1.27
NLRC3-204ENST00000615877 KRTAP10-10P60014 251 aa7.12□□□□□ -1.27
NLRC3-204ENST00000615877 PP632Q6XCG6 107 aa7.1□□□□□ -1.27
NLRC3-204ENST00000615877 FREM2Q5SZK8 3169 aa7.09□□□□□ -1.27
NLRC3-204ENST00000615877 NOTCH1P46531 2555 aa7.09□□□□□ -1.27
NLRC3-204ENST00000615877 MYO15AQ9UKN7 3530 aa7.09□□□□□ -1.27
NLRC3-204ENST00000615877 LAMA1P25391 3075 aa7.08□□□□□ -1.28
NLRC3-204ENST00000615877 FRYQ5TBA9 3013 aa7.08□□□□□ -1.28
NLRC3-204ENST00000615877 XP32Q5T750 250 aa7.07□□□□□ -1.28
NLRC3-204ENST00000615877 SETXQ7Z333 2677 aaKnown RBP7.07□□□□□ -1.28
NLRC3-204ENST00000615877 SPEGQ15772 3267 aa7.06□□□□□ -1.28
NLRC3-204ENST00000615877 P0C880 135 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms