RNA–Protein interactions for RNA: ENST00000615676.1

YTHDF3-208, Transcript of YTH N6-methyladenosine RNA binding protein 3, humanhuman

TSL 1 (best)

Gene YTHDF3, Length 5,092 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YTHDF3-208ENST00000615676 LCE6AA0A183 80 aa8.2□□□□□ -1.1
YTHDF3-208ENST00000615676 KRTAP1-5Q9BYS1 174 aa8.2□□□□□ -1.1
YTHDF3-208ENST00000615676 PRRC2CQ9Y520 2896 aaKnown RBP8.19□□□□□ -1.1
YTHDF3-208ENST00000615676 KRTAP26-1Q6PEX3 210 aa8.18□□□□□ -1.1
YTHDF3-208ENST00000615676 PCNTO95613 3336 aa8.18□□□□□ -1.1
YTHDF3-208ENST00000615676 FP248Q71RG6 208 aaPredicted RBP8.17□□□□□ -1.1
YTHDF3-208ENST00000615676 Q5VV11 94 aa8.15□□□□□ -1.1
YTHDF3-208ENST00000615676 KRTAP10-1P60331 282 aa8.15□□□□□ -1.1
YTHDF3-208ENST00000615676 RPL37P61927 97 aaKnown RBP8.14□□□□□ -1.11
YTHDF3-208ENST00000615676 Q5XG85 94 aa8.14□□□□□ -1.11
YTHDF3-208ENST00000615676 A0A0A0MQY5 61 aa8.12□□□□□ -1.11
YTHDF3-208ENST00000615676 KRTAP10-2P60368 255 aa8.09□□□□□ -1.11
YTHDF3-208ENST00000615676 FLG2Q5D862 2391 aaPredicted RBP8.09□□□□□ -1.11
YTHDF3-208ENST00000615676 PRAC1Q96KF2 57 aa8.09□□□□□ -1.11
YTHDF3-208ENST00000615676 CFAP46Q8IYW2 2715 aa8.08□□□□□ -1.12
YTHDF3-208ENST00000615676 OXTP01178 125 aa8.08□□□□□ -1.12
YTHDF3-208ENST00000615676 ROMO1P60602 79 aa8.08□□□□□ -1.12
YTHDF3-208ENST00000615676 M0QZ58 72 aa8.07□□□□□ -1.12
YTHDF3-208ENST00000615676 CYSTM1Q9H1C7 97 aa8.06□□□□□ -1.12
YTHDF3-208ENST00000615676 H1FX-AS1Q4G0G2 97 aa8.06□□□□□ -1.12
YTHDF3-208ENST00000615676 Q6ZR54 194 aa8.05□□□□□ -1.12
YTHDF3-208ENST00000615676 KRTAP4-16G5E9R7 235 aaPredicted RBP8.02□□□□□ -1.12
YTHDF3-208ENST00000615676 PLAC4Q8WY50 150 aa8.01□□□□□ -1.13
YTHDF3-208ENST00000615676 NBEAL1Q6ZS30 2694 aa7.99□□□□□ -1.13
YTHDF3-208ENST00000615676 CEP350Q5VT06 3117 aa7.97□□□□□ -1.13
YTHDF3-208ENST00000615676 KRTAP29-1A8MX34 341 aaPredicted RBP7.97□□□□□ -1.13
YTHDF3-208ENST00000615676 ADM2Q7Z4H4 148 aa7.95□□□□□ -1.14
YTHDF3-208ENST00000615676 ASB16-AS1Q495Z4 193 aa7.95□□□□□ -1.14
YTHDF3-208ENST00000615676 PANO1I0J062 215 aa7.95□□□□□ -1.14
YTHDF3-208ENST00000615676 RPS29P62273 56 aaKnown RBP7.94□□□□□ -1.14
YTHDF3-208ENST00000615676 DNAH12Q6ZR08 3092 aa7.93□□□□□ -1.14
YTHDF3-208ENST00000615676 TEP1Q99973 2627 aaKnown RBP7.93□□□□□ -1.14
YTHDF3-208ENST00000615676 AKAP13Q12802 2813 aa7.92□□□□□ -1.14
YTHDF3-208ENST00000615676 A0A087X002 238 aa7.92□□□□□ -1.14
YTHDF3-208ENST00000615676 CENPEQ02224 2701 aa7.89□□□□□ -1.15
YTHDF3-208ENST00000615676 TEX15Q9BXT5 2789 aa7.89□□□□□ -1.15
YTHDF3-208ENST00000615676 SETXQ7Z333 2677 aaKnown RBP7.88□□□□□ -1.15
YTHDF3-208ENST00000615676 BRCA2P51587 3418 aa7.88□□□□□ -1.15
YTHDF3-208ENST00000615676 CHD6Q8TD26 2715 aa7.88□□□□□ -1.15
YTHDF3-208ENST00000615676 DMBT1Q9UGM3 2413 aaPredicted RBP7.87□□□□□ -1.15
YTHDF3-208ENST00000615676 SPATA8Q6RVD6 105 aa7.87□□□□□ -1.15
YTHDF3-208ENST00000615676 H3BS24 57 aa7.86□□□□□ -1.15
YTHDF3-208ENST00000615676 COL6A5A8TX70 2615 aa7.85□□□□□ -1.15
YTHDF3-208ENST00000615676 UNC79Q9P2D8 2635 aa7.82□□□□□ -1.16
YTHDF3-208ENST00000615676 Q6ZRN7 208 aaPredicted RBP7.79□□□□□ -1.16
YTHDF3-208ENST00000615676 NOTCH2NLQ7Z3S9 236 aa7.79□□□□□ -1.16
YTHDF3-208ENST00000615676 NOTCH1P46531 2555 aa7.78□□□□□ -1.16
YTHDF3-208ENST00000615676 STAB2Q8WWQ8 2551 aa7.73□□□□□ -1.17
YTHDF3-208ENST00000615676 HTTP42858 3142 aa7.73□□□□□ -1.17
YTHDF3-208ENST00000615676 GCN1Q92616 2671 aaKnown RBP7.73□□□□□ -1.17
YTHDF3-208ENST00000615676 A8MUU9 505 aa7.73□□□□□ -1.17
YTHDF3-208ENST00000615676 KRTAP11-1Q8IUC1 163 aa7.72□□□□□ -1.17
YTHDF3-208ENST00000615676 LAMA2P24043 3122 aaKnown RBP7.7□□□□□ -1.18
YTHDF3-208ENST00000615676 LAMA3Q16787 3333 aa7.68□□□□□ -1.18
YTHDF3-208ENST00000615676 KRTAP13-2Q52LG2 175 aa7.68□□□□□ -1.18
YTHDF3-208ENST00000615676 KRTAP13-1Q8IUC0 172 aa7.67□□□□□ -1.18
YTHDF3-208ENST00000615676 MKI67P46013 3256 aaKnown RBP7.66□□□□□ -1.18
YTHDF3-208ENST00000615676 KRTAP7-1Q8IUC3 87 aa7.66□□□□□ -1.18
YTHDF3-208ENST00000615676 C20orf166-AS1Q96NR2 134 aa7.64□□□□□ -1.19
YTHDF3-208ENST00000615676 KRTAP25-1Q3LHN0 102 aa7.63□□□□□ -1.19
YTHDF3-208ENST00000615676 ZNF292O60281 2723 aa7.63□□□□□ -1.19
YTHDF3-208ENST00000615676 C5orf42Q9H799 3197 aa7.63□□□□□ -1.19
YTHDF3-208ENST00000615676 A8MU10 97 aa7.61□□□□□ -1.19
YTHDF3-208ENST00000615676 CHD7Q9P2D1 2997 aa7.61□□□□□ -1.19
YTHDF3-208ENST00000615676 NSD1Q96L73 2696 aaPredicted RBP7.59□□□□□ -1.19
YTHDF3-208ENST00000615676 KRTAP21-3Q3LHN1 58 aa7.59□□□□□ -1.19
YTHDF3-208ENST00000615676 BAHCC1Q9P281 2608 aa7.59□□□□□ -1.19
YTHDF3-208ENST00000615676 A6NN06 94 aa7.58□□□□□ -1.2
YTHDF3-208ENST00000615676 MAP1AP78559 2803 aaPredicted RBP7.56□□□□□ -1.2
YTHDF3-208ENST00000615676 KRTAP16-1A8MUX0 517 aa7.55□□□□□ -1.2
YTHDF3-208ENST00000615676 TNP1P09430 55 aa7.55□□□□□ -1.2
YTHDF3-208ENST00000615676 UBR5O95071 2799 aaPredicted RBP7.53□□□□□ -1.2
YTHDF3-208ENST00000615676 NBEAL2Q6ZNJ1 2754 aa7.53□□□□□ -1.2
YTHDF3-208ENST00000615676 MGAQ8IWI9 3026 aa7.52□□□□□ -1.21
YTHDF3-208ENST00000615676 CHD9Q3L8U1 2897 aa7.52□□□□□ -1.21
YTHDF3-208ENST00000615676 IGSF10Q6WRI0 2623 aa7.5□□□□□ -1.21
YTHDF3-208ENST00000615676 A0A0C4DFX4 3053 aa7.46□□□□□ -1.21
YTHDF3-208ENST00000615676 CDH23Q9H251 3354 aa7.45□□□□□ -1.22
YTHDF3-208ENST00000615676 ITPR2Q14571 2701 aa7.45□□□□□ -1.22
YTHDF3-208ENST00000615676 UNC80Q8N2C7 3258 aa7.42□□□□□ -1.22
YTHDF3-208ENST00000615676 RANBP2P49792 3224 aaKnown RBP7.41□□□□□ -1.22
YTHDF3-208ENST00000615676 PP632Q6XCG6 107 aa7.37□□□□□ -1.23
YTHDF3-208ENST00000615676 KMT2BQ9UMN6 2715 aaPredicted RBP7.36□□□□□ -1.23
YTHDF3-208ENST00000615676 CFAP54Q96N23 3096 aa7.36□□□□□ -1.23
YTHDF3-208ENST00000615676 NDUFAF8A1L188 74 aa7.36□□□□□ -1.23
YTHDF3-208ENST00000615676 DSPP15924 2871 aaKnown RBP7.34□□□□□ -1.23
YTHDF3-208ENST00000615676 TRANK1O15050 2925 aa7.33□□□□□ -1.24
YTHDF3-208ENST00000615676 C10orf95Q9H7T3 257 aa7.32□□□□□ -1.24
YTHDF3-208ENST00000615676 XP32Q5T750 250 aa7.31□□□□□ -1.24
YTHDF3-208ENST00000615676 ITPR1Q14643 2758 aa7.3□□□□□ -1.24
YTHDF3-208ENST00000615676 XIRP2A4UGR9 3374 aa7.29□□□□□ -1.24
YTHDF3-208ENST00000615676 KRTAP1-4P0C5Y4 121 aa7.29□□□□□ -1.24
YTHDF3-208ENST00000615676 SZT2Q5T011 3432 aa7.28□□□□□ -1.24
YTHDF3-208ENST00000615676 DNAH14Q0VDD8 3507 aa7.28□□□□□ -1.24
YTHDF3-208ENST00000615676 KRTAP10-8P60410 259 aa7.27□□□□□ -1.25
YTHDF3-208ENST00000615676 FRYQ5TBA9 3013 aa7.27□□□□□ -1.25
YTHDF3-208ENST00000615676 REV3LO60673 3130 aa7.25□□□□□ -1.25
YTHDF3-208ENST00000615676 EYSQ5T1H1 3165 aa7.25□□□□□ -1.25
YTHDF3-208ENST00000615676 TPRXLQ17RH7 258 aa7.24□□□□□ -1.25
YTHDF3-208ENST00000615676 USP34Q70CQ2 3546 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 113.5 ms