RNA–Protein interactions for RNA: ENST00000615285.4

NCAM1-222, Transcript of neural cell adhesion molecule 1, human

TSL 5 BASIC

Gene NCAM1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAM1-222	ENST00000615285	CFAP54	Q96N23	3096 aa		5.83	□□□□□ -1.48
NCAM1-222	ENST00000615285	BAHCC1	Q9P281	2608 aa		5.81	□□□□□ -1.48
NCAM1-222	ENST00000615285		A0A0C4DFX4	3053 aa		5.81	□□□□□ -1.48
NCAM1-222	ENST00000615285	IGSF10	Q6WRI0	2623 aa		5.8	□□□□□ -1.48
NCAM1-222	ENST00000615285	UNC79	Q9P2D8	2635 aa		5.8	□□□□□ -1.48
NCAM1-222	ENST00000615285	MKI67	P46013	3256 aa	Known RBP	5.79	□□□□□ -1.48
NCAM1-222	ENST00000615285	RPS29	P62273	56 aa	Known RBP	5.78	□□□□□ -1.48
NCAM1-222	ENST00000615285		M0R2T5	61 aa		5.77	□□□□□ -1.49
NCAM1-222	ENST00000615285		Q1T7F1	81 aa		5.77	□□□□□ -1.49
NCAM1-222	ENST00000615285		Q8NDZ9	215 aa		5.76	□□□□□ -1.49
NCAM1-222	ENST00000615285	MMP24-AS1	A0A0U1RRL7	71 aa		5.76	□□□□□ -1.49
NCAM1-222	ENST00000615285		Q6ZRN7	208 aa	Predicted RBP	5.75	□□□□□ -1.49
NCAM1-222	ENST00000615285	LINC00472	Q9H8W2	130 aa		5.75	□□□□□ -1.49
NCAM1-222	ENST00000615285	OCR1	Q9BZK8	76 aa		5.75	□□□□□ -1.49
NCAM1-222	ENST00000615285	AKAP13	Q12802	2813 aa		5.74	□□□□□ -1.49
NCAM1-222	ENST00000615285	KMT2B	Q9UMN6	2715 aa	Predicted RBP	5.74	□□□□□ -1.49
NCAM1-222	ENST00000615285	BRCA2	P51587	3418 aa		5.74	□□□□□ -1.49
NCAM1-222	ENST00000615285	CAMK2N1	Q7Z7J9	78 aa		5.74	□□□□□ -1.49
NCAM1-222	ENST00000615285	CSAG1	Q6PB30	78 aa		5.73	□□□□□ -1.49
NCAM1-222	ENST00000615285	CYSTM1	Q9H1C7	97 aa		5.73	□□□□□ -1.49
NCAM1-222	ENST00000615285		A0A1B0GU33	70 aa		5.73	□□□□□ -1.49
NCAM1-222	ENST00000615285	HRES1	P13985	223 aa		5.72	□□□□□ -1.49
NCAM1-222	ENST00000615285	LAMA2	P24043	3122 aa	Known RBP	5.72	□□□□□ -1.49
NCAM1-222	ENST00000615285		S4R3F8	94 aa		5.71	□□□□□ -1.49
NCAM1-222	ENST00000615285	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	5.71	□□□□□ -1.5
NCAM1-222	ENST00000615285	LAMA3	Q16787	3333 aa		5.69	□□□□□ -1.5
NCAM1-222	ENST00000615285	ASB16-AS1	Q495Z4	193 aa		5.69	□□□□□ -1.5
NCAM1-222	ENST00000615285		Q75L30	129 aa		5.69	□□□□□ -1.5
NCAM1-222	ENST00000615285	XIRP2	A4UGR9	3374 aa		5.68	□□□□□ -1.5
NCAM1-222	ENST00000615285	DMAC1	Q96GE9	116 aa		5.68	□□□□□ -1.5
NCAM1-222	ENST00000615285	FREM2	Q5SZK8	3169 aa		5.68	□□□□□ -1.5
NCAM1-222	ENST00000615285	PRAC1	Q96KF2	57 aa		5.67	□□□□□ -1.5
NCAM1-222	ENST00000615285	SPINK7	P58062	85 aa		5.66	□□□□□ -1.5
NCAM1-222	ENST00000615285		Q5W150	140 aa		5.66	□□□□□ -1.5
NCAM1-222	ENST00000615285	PANO1	I0J062	215 aa		5.65	□□□□□ -1.5
NCAM1-222	ENST00000615285	LINC01558	Q9Y6Z2	57 aa		5.65	□□□□□ -1.5
NCAM1-222	ENST00000615285	RANBP2	P49792	3224 aa	Known RBP	5.64	□□□□□ -1.51
NCAM1-222	ENST00000615285	UNC80	Q8N2C7	3258 aa		5.64	□□□□□ -1.51
NCAM1-222	ENST00000615285		H3BS24	57 aa		5.63	□□□□□ -1.51
NCAM1-222	ENST00000615285	MGA	Q8IWI9	3026 aa		5.63	□□□□□ -1.51
NCAM1-222	ENST00000615285		Q8N9P0	234 aa	Predicted RBP	5.63	□□□□□ -1.51
NCAM1-222	ENST00000615285	TEP1	Q99973	2627 aa	Known RBP	5.63	□□□□□ -1.51
NCAM1-222	ENST00000615285	COL6A5	A8TX70	2615 aa		5.62	□□□□□ -1.51
NCAM1-222	ENST00000615285		Q5XG85	94 aa		5.62	□□□□□ -1.51
NCAM1-222	ENST00000615285	TRIO	O75962	3097 aa		5.62	□□□□□ -1.51
NCAM1-222	ENST00000615285	CELSR3	Q9NYQ7	3312 aa		5.62	□□□□□ -1.51
NCAM1-222	ENST00000615285	CENPE	Q02224	2701 aa		5.61	□□□□□ -1.51
NCAM1-222	ENST00000615285	TEX15	Q9BXT5	2789 aa		5.6	□□□□□ -1.51
NCAM1-222	ENST00000615285	PRUNE2	Q8WUY3	3088 aa		5.59	□□□□□ -1.51
NCAM1-222	ENST00000615285		A0A087X002	238 aa		5.58	□□□□□ -1.52
NCAM1-222	ENST00000615285		A0A0A0MQY5	61 aa		5.58	□□□□□ -1.52
NCAM1-222	ENST00000615285	ITPR2	Q14571	2701 aa		5.57	□□□□□ -1.52
NCAM1-222	ENST00000615285	WDFY4	Q6ZS81	3184 aa		5.56	□□□□□ -1.52
NCAM1-222	ENST00000615285	STAB1	Q9NY15	2570 aa		5.55	□□□□□ -1.52
NCAM1-222	ENST00000615285	DSP	P15924	2871 aa	Known RBP	5.55	□□□□□ -1.52
NCAM1-222	ENST00000615285	GCN1	Q92616	2671 aa	Known RBP	5.55	□□□□□ -1.52
NCAM1-222	ENST00000615285	KRTAP13-1	Q8IUC0	172 aa		5.55	□□□□□ -1.52
NCAM1-222	ENST00000615285		R4GN34	69 aa		5.54	□□□□□ -1.52
NCAM1-222	ENST00000615285	SETX	Q7Z333	2677 aa	Known RBP	5.54	□□□□□ -1.52
NCAM1-222	ENST00000615285	DNAH14	Q0VDD8	3507 aa		5.54	□□□□□ -1.52
NCAM1-222	ENST00000615285	CDH23	Q9H251	3354 aa		5.53	□□□□□ -1.52
NCAM1-222	ENST00000615285	CHD6	Q8TD26	2715 aa		5.53	□□□□□ -1.52
NCAM1-222	ENST00000615285		Q5VV11	94 aa		5.52	□□□□□ -1.53
NCAM1-222	ENST00000615285	VPS13A	Q96RL7	3174 aa		5.52	□□□□□ -1.53
NCAM1-222	ENST00000615285	TNRC18	O15417	2968 aa	Predicted RBP	5.51	□□□□□ -1.53
NCAM1-222	ENST00000615285	RPL37	P61927	97 aa	Known RBP	5.49	□□□□□ -1.53
NCAM1-222	ENST00000615285	NSD1	Q96L73	2696 aa	Predicted RBP	5.49	□□□□□ -1.53
NCAM1-222	ENST00000615285	KRTAP29-1	A8MX34	341 aa	Predicted RBP	5.48	□□□□□ -1.53
NCAM1-222	ENST00000615285	KRTAP7-1	Q8IUC3	87 aa		5.48	□□□□□ -1.53
NCAM1-222	ENST00000615285	KRTAP11-1	Q8IUC1	163 aa		5.48	□□□□□ -1.53
NCAM1-222	ENST00000615285	KRTAP13-2	Q52LG2	175 aa		5.47	□□□□□ -1.53
NCAM1-222	ENST00000615285	ROMO1	P60602	79 aa		5.47	□□□□□ -1.53
NCAM1-222	ENST00000615285	H1FX-AS1	Q4G0G2	97 aa		5.46	□□□□□ -1.53
NCAM1-222	ENST00000615285	SZT2	Q5T011	3432 aa		5.44	□□□□□ -1.54
NCAM1-222	ENST00000615285	PLAC4	Q8WY50	150 aa		5.43	□□□□□ -1.54
NCAM1-222	ENST00000615285	FRY	Q5TBA9	3013 aa		5.42	□□□□□ -1.54
NCAM1-222	ENST00000615285	NOTCH1	P46531	2555 aa		5.42	□□□□□ -1.54
NCAM1-222	ENST00000615285	HIVEP1	P15822	2718 aa		5.42	□□□□□ -1.54
NCAM1-222	ENST00000615285		M0QZ58	72 aa		5.42	□□□□□ -1.54
NCAM1-222	ENST00000615285	UBR5	O95071	2799 aa	Predicted RBP	5.41	□□□□□ -1.54
NCAM1-222	ENST00000615285	MAP1A	P78559	2803 aa	Predicted RBP	5.41	□□□□□ -1.54
NCAM1-222	ENST00000615285	SPATA8	Q6RVD6	105 aa		5.4	□□□□□ -1.54
NCAM1-222	ENST00000615285	VCAN	P13611	3396 aa		5.4	□□□□□ -1.55
NCAM1-222	ENST00000615285	NBEAL2	Q6ZNJ1	2754 aa		5.37	□□□□□ -1.55
NCAM1-222	ENST00000615285	NBEAL1	Q6ZS30	2694 aa		5.37	□□□□□ -1.55
NCAM1-222	ENST00000615285	FLNC	Q14315	2725 aa		5.36	□□□□□ -1.55
NCAM1-222	ENST00000615285	NOTCH2NL	Q7Z3S9	236 aa		5.36	□□□□□ -1.55
NCAM1-222	ENST00000615285	ADM2	Q7Z4H4	148 aa		5.36	□□□□□ -1.55
NCAM1-222	ENST00000615285	ITPR1	Q14643	2758 aa		5.35	□□□□□ -1.55
NCAM1-222	ENST00000615285	UTP20	O75691	2785 aa	Known RBP	5.35	□□□□□ -1.55
NCAM1-222	ENST00000615285	APC	P25054	2843 aa		5.35	□□□□□ -1.55
NCAM1-222	ENST00000615285		A8MUU9	505 aa		5.34	□□□□□ -1.55
NCAM1-222	ENST00000615285	KALRN	O60229	2985 aa		5.34	□□□□□ -1.56
NCAM1-222	ENST00000615285	C20orf166-AS1	Q96NR2	134 aa		5.34	□□□□□ -1.56
NCAM1-222	ENST00000615285	COL6A3	P12111	3177 aa		5.33	□□□□□ -1.56
NCAM1-222	ENST00000615285	FLG2	Q5D862	2391 aa	Predicted RBP	5.33	□□□□□ -1.56
NCAM1-222	ENST00000615285	LAMA1	P25391	3075 aa		5.32	□□□□□ -1.56
NCAM1-222	ENST00000615285	REV3L	O60673	3130 aa		5.32	□□□□□ -1.56
NCAM1-222	ENST00000615285	CFAP47	Q6ZTR5	3102 aa		5.3	□□□□□ -1.56
NCAM1-222	ENST00000615285	TPRXL	Q17RH7	258 aa		5.3	□□□□□ -1.56

Retrieved 100 of 20,778 RNA–protein pairs in 52 ms