RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 H0Y9J4 135 aa14.02□□□□□ -0.16
SHANK2-220ENST00000608988 CNBPP62633 177 aaKnown RBP14.02□□□□□ -0.16
SHANK2-220ENST00000608988 CASC2Q6XLA1 102 aa14.01□□□□□ -0.17
SHANK2-220ENST00000608988 LINC00208Q96KT6 92 aa14.01□□□□□ -0.17
SHANK2-220ENST00000608988 PRLHP81277 87 aa14□□□□□ -0.17
SHANK2-220ENST00000608988 H0Y9P7 68 aa13.99□□□□□ -0.17
SHANK2-220ENST00000608988 A0A096LNI7 61 aa13.99□□□□□ -0.17
SHANK2-220ENST00000608988 A8MWP4 228 aa13.99□□□□□ -0.17
SHANK2-220ENST00000608988 A0A0G2JQZ4 141 aa13.98□□□□□ -0.17
SHANK2-220ENST00000608988 A0A1W2PNN7 141 aa13.98□□□□□ -0.17
SHANK2-220ENST00000608988 DEFB116Q30KQ4 102 aa13.98□□□□□ -0.17
SHANK2-220ENST00000608988 PRR4Q16378 134 aa13.95□□□□□ -0.18
SHANK2-220ENST00000608988 ATRQ13535 2644 aa13.95□□□□□ -0.18
SHANK2-220ENST00000608988 LINC00472Q9H8W2 130 aa13.95□□□□□ -0.18
SHANK2-220ENST00000608988 PSPHP1O15172 72 aa13.93□□□□□ -0.18
SHANK2-220ENST00000608988 RPL37AP61513 92 aaKnown RBP13.93□□□□□ -0.18
SHANK2-220ENST00000608988 LIMD2Q9BT23 127 aa13.91□□□□□ -0.18
SHANK2-220ENST00000608988 C14orf177Q52M58 125 aa13.9□□□□□ -0.18
SHANK2-220ENST00000608988 IGKV2-24A0A0C4DH68 120 aa13.89□□□□□ -0.19
SHANK2-220ENST00000608988 C9orf163Q8N9P6 203 aa13.89□□□□□ -0.19
SHANK2-220ENST00000608988 FBN1P35555 2871 aaKnown RBP13.85□□□□□ -0.19
SHANK2-220ENST00000608988 A8MUN3 132 aa13.85□□□□□ -0.19
SHANK2-220ENST00000608988 PKD1L1Q8TDX9 2849 aa13.85□□□□□ -0.19
SHANK2-220ENST00000608988 Q5VV11 94 aa13.83□□□□□ -0.2
SHANK2-220ENST00000608988 TENM3Q9P273 2699 aa13.83□□□□□ -0.2
SHANK2-220ENST00000608988 PMAIP1Q13794 54 aa13.82□□□□□ -0.2
SHANK2-220ENST00000608988 Q8N9P0 234 aaPredicted RBP13.82□□□□□ -0.2
SHANK2-220ENST00000608988 TRRAPQ9Y4A5 3859 aa13.82□□□□□ -0.2
SHANK2-220ENST00000608988 MMP24-AS1A0A0U1RRL7 71 aa13.81□□□□□ -0.2
SHANK2-220ENST00000608988 DNAH1Q9P2D7 4330 aa13.81□□□□□ -0.2
SHANK2-220ENST00000608988 PHF5AQ7RTV0 110 aaKnown RBP13.8□□□□□ -0.2
SHANK2-220ENST00000608988 TP53AIP1Q9HCN2 124 aa13.79□□□□□ -0.2
SHANK2-220ENST00000608988 IGLV7-46A0A075B6I9 117 aa13.78□□□□□ -0.2
SHANK2-220ENST00000608988 KRTAP24-1Q3LI83 254 aa13.78□□□□□ -0.2
SHANK2-220ENST00000608988 KRTAP1-5Q9BYS1 174 aa13.76□□□□□ -0.21
SHANK2-220ENST00000608988 ASB16-AS1Q495Z4 193 aa13.75□□□□□ -0.21
SHANK2-220ENST00000608988 KRTAP11-1Q8IUC1 163 aa13.75□□□□□ -0.21
SHANK2-220ENST00000608988 MOBPQ13875 183 aa13.74□□□□□ -0.21
SHANK2-220ENST00000608988 SEC61GP60059 68 aa13.74□□□□□ -0.21
SHANK2-220ENST00000608988 STAB1Q9NY15 2570 aa13.71□□□□□ -0.21
SHANK2-220ENST00000608988 LOC101927531A0A1B0GV80 90 aa13.71□□□□□ -0.21
SHANK2-220ENST00000608988 PRB2P02812 416 aaPredicted RBP13.7□□□□□ -0.22
SHANK2-220ENST00000608988 Q75L30 129 aa13.7□□□□□ -0.22
SHANK2-220ENST00000608988 COA5Q86WW8 74 aa13.7□□□□□ -0.22
SHANK2-220ENST00000608988 KRTAP13-1Q8IUC0 172 aa13.7□□□□□ -0.22
SHANK2-220ENST00000608988 CHKB-CPT1BH3BT56 60 aa13.7□□□□□ -0.22
SHANK2-220ENST00000608988 DNAH3Q8TD57 4116 aa13.69□□□□□ -0.22
SHANK2-220ENST00000608988 PRR15LQ9BU68 103 aa13.69□□□□□ -0.22
SHANK2-220ENST00000608988 COL6A5A8TX70 2615 aa13.69□□□□□ -0.22
SHANK2-220ENST00000608988 CHTF8P0CG12 524 aa13.68□□□□□ -0.22
SHANK2-220ENST00000608988 Q6ZR54 194 aa13.66□□□□□ -0.22
SHANK2-220ENST00000608988 UBE2DNLQ8IWF7 75 aa13.65□□□□□ -0.22
SHANK2-220ENST00000608988 Q96NJ1 140 aa13.64□□□□□ -0.23
SHANK2-220ENST00000608988 K7EIL1 84 aa13.63□□□□□ -0.23
SHANK2-220ENST00000608988 CMYA5Q8N3K9 4069 aa13.63□□□□□ -0.23
SHANK2-220ENST00000608988 ANK2Q01484 3957 aa13.62□□□□□ -0.23
SHANK2-220ENST00000608988 C8orf17Q9NRJ1 99 aa13.61□□□□□ -0.23
SHANK2-220ENST00000608988 LINC00483Q53H64 154 aa13.6□□□□□ -0.23
SHANK2-220ENST00000608988 ATP11AUNQ6ZP68 121 aa13.58□□□□□ -0.24
SHANK2-220ENST00000608988 APLNQ9ULZ1 77 aa13.58□□□□□ -0.24
SHANK2-220ENST00000608988 CD164Q04900 197 aa13.57□□□□□ -0.24
SHANK2-220ENST00000608988 LINC01558Q9Y6Z2 57 aa13.57□□□□□ -0.24
SHANK2-220ENST00000608988 ZNF706Q9Y5V0 76 aaPredicted RBP13.56□□□□□ -0.24
SHANK2-220ENST00000608988 A0A1B0GVX0 72 aa13.55□□□□□ -0.24
SHANK2-220ENST00000608988 PLAC8Q9NZF1 115 aa13.53□□□□□ -0.24
SHANK2-220ENST00000608988 PCOTHQ58A44 107 aa13.52□□□□□ -0.25
SHANK2-220ENST00000608988 A6NED7 52 aa13.51□□□□□ -0.25
SHANK2-220ENST00000608988 CDK2AP2O75956 126 aa13.5□□□□□ -0.25
SHANK2-220ENST00000608988 IGLV9-49A0A0B4J1Y8 123 aa13.5□□□□□ -0.25
SHANK2-220ENST00000608988 CDC42SE1Q9NRR8 79 aa13.5□□□□□ -0.25
SHANK2-220ENST00000608988 A8MU10 97 aa13.48□□□□□ -0.25
SHANK2-220ENST00000608988 MRPL34Q9BQ48 92 aaKnown RBP13.48□□□□□ -0.25
SHANK2-220ENST00000608988 LCA10Q71F78 164 aa13.48□□□□□ -0.25
SHANK2-220ENST00000608988 SPACA4Q8TDM5 124 aa13.47□□□□□ -0.25
SHANK2-220ENST00000608988 KTN1-AS1Q86SY8 53 aa13.46□□□□□ -0.26
SHANK2-220ENST00000608988 IGHV6-1A0A0B4J1U7 121 aa13.44□□□□□ -0.26
SHANK2-220ENST00000608988 NBDYA0A0U1RRE5 68 aa13.44□□□□□ -0.26
SHANK2-220ENST00000608988 PANO1I0J062 215 aa13.44□□□□□ -0.26
SHANK2-220ENST00000608988 NDUFS5O43920 106 aa13.43□□□□□ -0.26
SHANK2-220ENST00000608988 Q6ZRN7 208 aaPredicted RBP13.42□□□□□ -0.26
SHANK2-220ENST00000608988 WWC2-AS2Q96NR7 200 aa13.42□□□□□ -0.26
SHANK2-220ENST00000608988 MDFIQ99750 246 aa13.4□□□□□ -0.26
SHANK2-220ENST00000608988 HRES1P13985 223 aa13.4□□□□□ -0.26
SHANK2-220ENST00000608988 SPTSSBQ8NFR3 76 aa13.39□□□□□ -0.27
SHANK2-220ENST00000608988 HUWE1Q7Z6Z7 4374 aaKnown RBP13.38□□□□□ -0.27
SHANK2-220ENST00000608988 SPAG11AQ6PDA7 123 aa13.38□□□□□ -0.27
SHANK2-220ENST00000608988 A6NN06 94 aa13.37□□□□□ -0.27
SHANK2-220ENST00000608988 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.36□□□□□ -0.27
SHANK2-220ENST00000608988 NBEAL1Q6ZS30 2694 aa13.35□□□□□ -0.27
SHANK2-220ENST00000608988 NOTCH1P46531 2555 aa13.32□□□□□ -0.28
SHANK2-220ENST00000608988 IGLV5-52A0A0A0MRZ9 124 aa13.31□□□□□ -0.28
SHANK2-220ENST00000608988 MGAM2Q2M2H8 2515 aa13.3□□□□□ -0.28
SHANK2-220ENST00000608988 TENM2Q9NT68 2774 aa13.3□□□□□ -0.28
SHANK2-220ENST00000608988 ZNF861PO60384 105 aa13.29□□□□□ -0.28
SHANK2-220ENST00000608988 NUPR2A6NF83 97 aa13.28□□□□□ -0.28
SHANK2-220ENST00000608988 SRRM2Q9UQ35 2752 aaKnown RBP13.27□□□□□ -0.29
SHANK2-220ENST00000608988 DNAH10Q8IVF4 4471 aa13.27□□□□□ -0.29
SHANK2-220ENST00000608988 KRTAP13-3Q3SY46 172 aa13.27□□□□□ -0.29
SHANK2-220ENST00000608988 PSORS1C2Q9UIG4 136 aa13.27□□□□□ -0.29
SHANK2-220ENST00000608988 DNHD1Q96M86 4753 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 253.5 ms