RNA–Protein interactions for RNA: ENST00000608456.5

HDDC2-205, Transcript of HD domain containing 2, humanhuman

TSL 3

Gene HDDC2, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-205ENST00000608456 KRTAP9-9Q9BYP9 154 aa4.03□□□□□ -1.76
HDDC2-205ENST00000608456 KRTAP9-4Q9BYQ2 154 aa4.03□□□□□ -1.76
HDDC2-205ENST00000608456 ZNF462Q96JM2 2506 aa4.02□□□□□ -1.77
HDDC2-205ENST00000608456 UBR5O95071 2799 aaPredicted RBP4.02□□□□□ -1.77
HDDC2-205ENST00000608456 A0A087X002 238 aa4.02□□□□□ -1.77
HDDC2-205ENST00000608456 A8MUN3 132 aa4.02□□□□□ -1.77
HDDC2-205ENST00000608456 PSPHP1O15172 72 aa4.02□□□□□ -1.77
HDDC2-205ENST00000608456 MOBPQ13875 183 aa4.02□□□□□ -1.77
HDDC2-205ENST00000608456 LINC01558Q9Y6Z2 57 aa4.02□□□□□ -1.77
HDDC2-205ENST00000608456 FBN2P35556 2912 aa4.01□□□□□ -1.77
HDDC2-205ENST00000608456 Q6ZR54 194 aa4.01□□□□□ -1.77
HDDC2-205ENST00000608456 KTN1-AS1Q86SY8 53 aa4.01□□□□□ -1.77
HDDC2-205ENST00000608456 CCDC168Q8NDH2 2452 aa4.01□□□□□ -1.77
HDDC2-205ENST00000608456 FAM168BA1KXE4 195 aa4□□□□□ -1.77
HDDC2-205ENST00000608456 CHKB-CPT1BH3BT56 60 aa4□□□□□ -1.77
HDDC2-205ENST00000608456 WFDC13Q8IUB5 93 aa4□□□□□ -1.77
HDDC2-205ENST00000608456 CDC42SE1Q9NRR8 79 aa4□□□□□ -1.77
HDDC2-205ENST00000608456 PLAC8Q9NZF1 115 aa4□□□□□ -1.77
HDDC2-205ENST00000608456 CELSR2Q9HCU4 2923 aa4□□□□□ -1.77
HDDC2-205ENST00000608456 LRCOL1A6NCL2 159 aa3.99□□□□□ -1.77
HDDC2-205ENST00000608456 CRYBG3Q68DQ2 2970 aa3.99□□□□□ -1.77
HDDC2-205ENST00000608456 FLNAP21333 2647 aaKnown RBP3.99□□□□□ -1.77
HDDC2-205ENST00000608456 SETD2Q9BYW2 2564 aaPredicted RBP3.98□□□□□ -1.77
HDDC2-205ENST00000608456 MMP24-AS1A0A0U1RRL7 71 aa3.98□□□□□ -1.77
HDDC2-205ENST00000608456 J3QKU1 62 aa3.98□□□□□ -1.77
HDDC2-205ENST00000608456 COA5Q86WW8 74 aa3.98□□□□□ -1.77
HDDC2-205ENST00000608456 APCP25054 2843 aa3.97□□□□□ -1.77
HDDC2-205ENST00000608456 VPS13CQ709C8 3753 aa3.97□□□□□ -1.77
HDDC2-205ENST00000608456 NOTCH2Q04721 2471 aa3.96□□□□□ -1.78
HDDC2-205ENST00000608456 KRTAP4-8A0A0G2JLE6 195 aa3.96□□□□□ -1.78
HDDC2-205ENST00000608456 PRR15LQ9BU68 103 aa3.96□□□□□ -1.78
HDDC2-205ENST00000608456 MTORP42345 2549 aa3.96□□□□□ -1.78
HDDC2-205ENST00000608456 GCN1Q92616 2671 aaKnown RBP3.96□□□□□ -1.78
HDDC2-205ENST00000608456 KMT2BQ9UMN6 2715 aaPredicted RBP3.95□□□□□ -1.78
HDDC2-205ENST00000608456 A6NED7 52 aa3.95□□□□□ -1.78
HDDC2-205ENST00000608456 KRTAP10-11P60412 298 aa3.95□□□□□ -1.78
HDDC2-205ENST00000608456 ZNF706Q9Y5V0 76 aaPredicted RBP3.95□□□□□ -1.78
HDDC2-205ENST00000608456 AKAP9Q99996 3911 aa3.95□□□□□ -1.78
HDDC2-205ENST00000608456 ACANP16112 2415 aa3.94□□□□□ -1.78
HDDC2-205ENST00000608456 NF1P21359 2839 aa3.94□□□□□ -1.78
HDDC2-205ENST00000608456 A0A096LNI7 61 aa3.94□□□□□ -1.78
HDDC2-205ENST00000608456 A0A1W2PNN7 141 aa3.94□□□□□ -1.78
HDDC2-205ENST00000608456 A6NN06 94 aa3.94□□□□□ -1.78
HDDC2-205ENST00000608456 INAFM1C9JVW0 142 aa3.94□□□□□ -1.78
HDDC2-205ENST00000608456 PRR4Q16378 134 aa3.94□□□□□ -1.78
HDDC2-205ENST00000608456 LINC00483Q53H64 154 aa3.94□□□□□ -1.78
HDDC2-205ENST00000608456 LCA10Q71F78 164 aa3.94□□□□□ -1.78
HDDC2-205ENST00000608456 RETNQ9HD89 108 aa3.94□□□□□ -1.78
HDDC2-205ENST00000608456 C8orf17Q9NRJ1 99 aa3.94□□□□□ -1.78
HDDC2-205ENST00000608456 KRTAP9-7A8MTY7 169 aa3.93□□□□□ -1.78
HDDC2-205ENST00000608456 KRTAP10-2P60368 255 aa3.93□□□□□ -1.78
HDDC2-205ENST00000608456 PRLHP81277 87 aa3.93□□□□□ -1.78
HDDC2-205ENST00000608456 KRTAP13-1Q8IUC0 172 aa3.93□□□□□ -1.78
HDDC2-205ENST00000608456 NBEAL2Q6ZNJ1 2754 aa3.92□□□□□ -1.78
HDDC2-205ENST00000608456 IGKV2-24A0A0C4DH68 120 aa3.92□□□□□ -1.78
HDDC2-205ENST00000608456 A0A1B0GVX0 72 aa3.92□□□□□ -1.78
HDDC2-205ENST00000608456 DEFB116Q30KQ4 102 aa3.92□□□□□ -1.78
HDDC2-205ENST00000608456 CASC10Q5T4H9 136 aa3.92□□□□□ -1.78
HDDC2-205ENST00000608456 LCE4AQ5TA78 99 aa3.92□□□□□ -1.78
HDDC2-205ENST00000608456 C7orf65Q6ZTY9 151 aa3.92□□□□□ -1.78
HDDC2-205ENST00000608456 SMR3AQ99954 134 aa3.92□□□□□ -1.78
HDDC2-205ENST00000608456 MRPL34Q9BQ48 92 aaKnown RBP3.92□□□□□ -1.78
HDDC2-205ENST00000608456 USP24Q9UPU5 2620 aa3.91□□□□□ -1.78
HDDC2-205ENST00000608456 CENPEQ02224 2701 aa3.91□□□□□ -1.78
HDDC2-205ENST00000608456 CDK2AP2O75956 126 aa3.91□□□□□ -1.78
HDDC2-205ENST00000608456 Q96NJ1 140 aa3.91□□□□□ -1.78
HDDC2-205ENST00000608456 PDZD2O15018 2839 aa3.9□□□□□ -1.78
HDDC2-205ENST00000608456 ACYP2P14621 99 aa3.9□□□□□ -1.79
HDDC2-205ENST00000608456 ANK3Q12955 4377 aaKnown RBP3.9□□□□□ -1.79
HDDC2-205ENST00000608456 A0A0A0MQY5 61 aa3.89□□□□□ -1.79
HDDC2-205ENST00000608456 C8orf87E5RJ46 101 aa3.89□□□□□ -1.79
HDDC2-205ENST00000608456 NBPF19A0A087WUL8 3843 aa3.88□□□□□ -1.79
HDDC2-205ENST00000608456 HRES1P13985 223 aa3.88□□□□□ -1.79
HDDC2-205ENST00000608456 Q8N1X5 172 aa3.88□□□□□ -1.79
HDDC2-205ENST00000608456 PRR26Q8N8Z3 221 aa3.88□□□□□ -1.79
HDDC2-205ENST00000608456 SPTSSBQ8NFR3 76 aa3.88□□□□□ -1.79
HDDC2-205ENST00000608456 RBM12B-AS1Q9P1G2 102 aa3.88□□□□□ -1.79
HDDC2-205ENST00000608456 A0A0G2JQZ4 141 aa3.87□□□□□ -1.79
HDDC2-205ENST00000608456 UNC79Q9P2D8 2635 aa3.86□□□□□ -1.79
HDDC2-205ENST00000608456 LCE1DQ5T752 114 aa3.86□□□□□ -1.79
HDDC2-205ENST00000608456 SPAG11AQ6PDA7 123 aa3.86□□□□□ -1.79
HDDC2-205ENST00000608456 NIPBLQ6KC79 2804 aaeCLIP3.85□□□□□ -1.799e-8■□□□□ 8.9
HDDC2-205ENST00000608456 KRTAP13-3Q3SY46 172 aa3.85□□□□□ -1.79
HDDC2-205ENST00000608456 SSBP3-AS1Q7Z2R9 100 aa3.85□□□□□ -1.79
HDDC2-205ENST00000608456 IGHV6-1A0A0B4J1U7 121 aa3.84□□□□□ -1.79
HDDC2-205ENST00000608456 PCOTHQ58A44 107 aa3.84□□□□□ -1.79
HDDC2-205ENST00000608456 KRTAP11-1Q8IUC1 163 aa3.84□□□□□ -1.79
HDDC2-205ENST00000608456 DMAC1Q96GE9 116 aa3.84□□□□□ -1.79
HDDC2-205ENST00000608456 KRTAP4-7Q9BYR0 210 aa3.84□□□□□ -1.79
HDDC2-205ENST00000608456 APLNQ9ULZ1 77 aa3.84□□□□□ -1.79
HDDC2-205ENST00000608456 A8MU10 97 aa3.83□□□□□ -1.8
HDDC2-205ENST00000608456 ZNF861PO60384 105 aa3.83□□□□□ -1.8
HDDC2-205ENST00000608456 CHTF8P0CG12 524 aa3.83□□□□□ -1.8
HDDC2-205ENST00000608456 SPATA8Q6RVD6 105 aa3.83□□□□□ -1.8
HDDC2-205ENST00000608456 SPACA4Q8TDM5 124 aa3.83□□□□□ -1.8
HDDC2-205ENST00000608456 TEP1Q99973 2627 aaKnown RBP3.83□□□□□ -1.8
HDDC2-205ENST00000608456 HIVEP1P15822 2718 aa3.83□□□□□ -1.8
HDDC2-205ENST00000608456 UBE2DNLQ8IWF7 75 aa3.82□□□□□ -1.8
HDDC2-205ENST00000608456 KRTAP1-5Q9BYS1 174 aa3.82□□□□□ -1.8
HDDC2-205ENST00000608456 CSMD2Q7Z408 3487 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms