RNA–Protein interactions for RNA: ENST00000607020.5

SSBP4-214, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 504 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-214ENST00000607020 A0A0B4J2C4 111 aa8.15□□□□□ -1.1
SSBP4-214ENST00000607020 KRTAP9-7A8MTY7 169 aa8.15□□□□□ -1.1
SSBP4-214ENST00000607020 HSD52Q0P140 79 aa8.15□□□□□ -1.1
SSBP4-214ENST00000607020 IGLV9-49A0A0B4J1Y8 123 aa8.14□□□□□ -1.11
SSBP4-214ENST00000607020 TMEM238LA0A1B0GVL6 79 aa8.14□□□□□ -1.11
SSBP4-214ENST00000607020 A6NJY4 79 aa8.14□□□□□ -1.11
SSBP4-214ENST00000607020 FXYD2P54710 66 aa8.14□□□□□ -1.11
SSBP4-214ENST00000607020 RAB37Q96AX2 223 aa8.14□□□□□ -1.11
SSBP4-214ENST00000607020 VAMP3Q15836 100 aa8.13□□□□□ -1.11
SSBP4-214ENST00000607020 LOC105371267A0A1B0GV96 52 aa8.11□□□□□ -1.11
SSBP4-214ENST00000607020 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.11□□□□□ -1.11
SSBP4-214ENST00000607020 H7C2G1 150 aa8.11□□□□□ -1.11
SSBP4-214ENST00000607020 NHP2Q9NX24 153 aaKnown RBP8.11□□□□□ -1.11
SSBP4-214ENST00000607020 SPRR1BP22528 89 aa8.1□□□□□ -1.11
SSBP4-214ENST00000607020 BVES-AS1Q5T3Y7 98 aa8.1□□□□□ -1.11
SSBP4-214ENST00000607020 PRO1933Q9H354 126 aa8.1□□□□□ -1.11
SSBP4-214ENST00000607020 M0R2T5 61 aa8.09□□□□□ -1.11
SSBP4-214ENST00000607020 LINC00575Q6W349 94 aa8.09□□□□□ -1.11
SSBP4-214ENST00000607020 PRO1854Q9UHT4 67 aa8.09□□□□□ -1.11
SSBP4-214ENST00000607020 IGLV5-48A0A075B6I7 105 aa8.06□□□□□ -1.12
SSBP4-214ENST00000607020 TEX49A0A1B0GTD5 131 aa8.06□□□□□ -1.12
SSBP4-214ENST00000607020 Q1RN00 199 aa8.06□□□□□ -1.12
SSBP4-214ENST00000607020 DEFB105AQ8NG35 78 aa8.06□□□□□ -1.12
SSBP4-214ENST00000607020 hADV29S1A0JD25 119 aa8.05□□□□□ -1.12
SSBP4-214ENST00000607020 K7ERJ3 54 aa8.05□□□□□ -1.12
SSBP4-214ENST00000607020 C9orf153Q5TBE3 101 aa8.05□□□□□ -1.12
SSBP4-214ENST00000607020 LAMTOR3Q9UHA4 124 aa8.04□□□□□ -1.12
SSBP4-214ENST00000607020 Q6ZQY7 126 aa8.03□□□□□ -1.12
SSBP4-214ENST00000607020 H0YGX0 51 aa8.02□□□□□ -1.13
SSBP4-214ENST00000607020 C9orf92A6NGG3 77 aa8.01□□□□□ -1.13
SSBP4-214ENST00000607020 SMIM29Q86T20 159 aa8.01□□□□□ -1.13
SSBP4-214ENST00000607020 LIMD2Q9BT23 127 aa8.01□□□□□ -1.13
SSBP4-214ENST00000607020 FLGP20930 4061 aaPredicted RBP8.01□□□□□ -1.13
SSBP4-214ENST00000607020 TSTD3H0UI37 97 aa8□□□□□ -1.13
SSBP4-214ENST00000607020 TRIAP1O43715 76 aa8□□□□□ -1.13
SSBP4-214ENST00000607020 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8□□□□□ -1.13
SSBP4-214ENST00000607020 COX6B2Q6YFQ2 88 aa7.99□□□□□ -1.13
SSBP4-214ENST00000607020 FAM218AQ96MZ4 157 aa7.99□□□□□ -1.13
SSBP4-214ENST00000607020 M0R143 59 aa7.98□□□□□ -1.13
SSBP4-214ENST00000607020 SNCGO76070 127 aa7.98□□□□□ -1.13
SSBP4-214ENST00000607020 SSPOA2VEC9 5147 aa7.98□□□□□ -1.13
SSBP4-214ENST00000607020 A0A1B0GX51 115 aa7.96□□□□□ -1.14
SSBP4-214ENST00000607020 PSMB2P49721 201 aa7.96□□□□□ -1.14
SSBP4-214ENST00000607020 PPDPFLQ8WWR9 84 aa7.96□□□□□ -1.14
SSBP4-214ENST00000607020 USH2AO75445 5202 aa7.96□□□□□ -1.14
SSBP4-214ENST00000607020 COX6CP09669 75 aa7.94□□□□□ -1.14
SSBP4-214ENST00000607020 RPL37P61927 97 aaKnown RBP7.94□□□□□ -1.14
SSBP4-214ENST00000607020 OCIAD2Q56VL3 154 aa7.94□□□□□ -1.14
SSBP4-214ENST00000607020 CLEC2BQ92478 149 aa7.94□□□□□ -1.14
SSBP4-214ENST00000607020 F8WEM9 126 aa7.93□□□□□ -1.14
SSBP4-214ENST00000607020 CD164Q04900 197 aa7.92□□□□□ -1.14
SSBP4-214ENST00000607020 Q5XG85 94 aa7.91□□□□□ -1.14
SSBP4-214ENST00000607020 HRCT1Q6UXD1 115 aa7.91□□□□□ -1.14
SSBP4-214ENST00000607020 SNHG12Q9BXW3 62 aa7.9□□□□□ -1.14
SSBP4-214ENST00000607020 GHRHP01286 108 aa7.89□□□□□ -1.15
SSBP4-214ENST00000607020 A0A0G2JQZ4 141 aa7.88□□□□□ -1.15
SSBP4-214ENST00000607020 DNAL4O96015 105 aa7.88□□□□□ -1.15
SSBP4-214ENST00000607020 SCGB1C2P0DMR2 95 aa7.88□□□□□ -1.15
SSBP4-214ENST00000607020 FCGBPQ9Y6R7 5405 aaPredicted RBP7.87□□□□□ -1.15
SSBP4-214ENST00000607020 Q6JHZ5 121 aa7.87□□□□□ -1.15
SSBP4-214ENST00000607020 BATFQ16520 125 aa7.86□□□□□ -1.15
SSBP4-214ENST00000607020 C1orf195Q5TG92 126 aa7.86□□□□□ -1.15
SSBP4-214ENST00000607020 LST1O00453 97 aa7.85□□□□□ -1.15
SSBP4-214ENST00000607020 FABP2P12104 132 aa7.85□□□□□ -1.15
SSBP4-214ENST00000607020 NDUFV3P56181 108 aaKnown RBP7.85□□□□□ -1.15
SSBP4-214ENST00000607020 IGFL1Q6UW32 110 aa7.85□□□□□ -1.15
SSBP4-214ENST00000607020 ORMDL1Q9P0S3 153 aa7.85□□□□□ -1.15
SSBP4-214ENST00000607020 H3BUT2 72 aa7.84□□□□□ -1.15
SSBP4-214ENST00000607020 TRACP01848 142 aa7.84□□□□□ -1.15
SSBP4-214ENST00000607020 KRTAP9-8Q9BYQ0 159 aa7.84□□□□□ -1.15
SSBP4-214ENST00000607020 H3BQ85 93 aa7.83□□□□□ -1.16
SSBP4-214ENST00000607020 NAA38Q9BRA0 125 aaKnown RBP7.83□□□□□ -1.16
SSBP4-214ENST00000607020 H3BMG7 143 aa7.8□□□□□ -1.16
SSBP4-214ENST00000607020 TMEM256-PLSCR3K7ERE1 68 aa7.8□□□□□ -1.16
SSBP4-214ENST00000607020 TRBV7-7A0A0K0K1E9 115 aa7.78□□□□□ -1.16
SSBP4-214ENST00000607020 TCL1BO95988 128 aa7.78□□□□□ -1.16
SSBP4-214ENST00000607020 ATXN8Q156A1 80 aa7.78□□□□□ -1.16
SSBP4-214ENST00000607020 LYRM7Q5U5X0 104 aa7.78□□□□□ -1.16
SSBP4-214ENST00000607020 TAX1BP3O14907 124 aa7.76□□□□□ -1.17
SSBP4-214ENST00000607020 UBE2V1Q13404 147 aa7.76□□□□□ -1.17
SSBP4-214ENST00000607020 Q6Q795 121 aa7.76□□□□□ -1.17
SSBP4-214ENST00000607020 C9orf118A6NHY6 69 aa7.75□□□□□ -1.17
SSBP4-214ENST00000607020 TRBV20-1A0A075B6N2 111 aa7.74□□□□□ -1.17
SSBP4-214ENST00000607020 A0A1B0GV72 72 aa7.74□□□□□ -1.17
SSBP4-214ENST00000607020 TEN1Q86WV5 123 aa7.74□□□□□ -1.17
SSBP4-214ENST00000607020 BAALC-AS2P0C853 105 aa7.73□□□□□ -1.17
SSBP4-214ENST00000607020 ANKRD29Q8N6D5 301 aa7.73□□□□□ -1.17
SSBP4-214ENST00000607020 KRTAP19-1Q8IUB9 90 aa7.72□□□□□ -1.17
SSBP4-214ENST00000607020 A0A1W2PPM0 123 aa7.71□□□□□ -1.18
SSBP4-214ENST00000607020 A0A1W2PNM2 257 aa7.7□□□□□ -1.18
SSBP4-214ENST00000607020 ATP11AUNQ6ZP68 121 aa7.7□□□□□ -1.18
SSBP4-214ENST00000607020 COL5A1-AS1Q5SY13 56 aa7.69□□□□□ -1.18
SSBP4-214ENST00000607020 Q75L30 129 aa7.69□□□□□ -1.18
SSBP4-214ENST00000607020 SS18L2Q9UHA2 77 aa7.69□□□□□ -1.18
SSBP4-214ENST00000607020 A0A087WSZ3 146 aa7.68□□□□□ -1.18
SSBP4-214ENST00000607020 TRBV7-4A0A0J9YYF1 115 aa7.68□□□□□ -1.18
SSBP4-214ENST00000607020 RBM3P98179 157 aaKnown RBP7.68□□□□□ -1.18
SSBP4-214ENST00000607020 MACF1Q9UPN3 7388 aaKnown RBP7.68□□□□□ -1.18
SSBP4-214ENST00000607020 PCP4L1A6NKN8 68 aa7.67□□□□□ -1.18
SSBP4-214ENST00000607020 SYNE2Q8WXH0 6885 aaKnown RBP7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms