RNA–Protein interactions for RNA: ENST00000600778.3

SOX2-OT-233, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 762 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-233ENST00000600778 HSD52Q0P140 79 aa6.52□□□□□ -1.37
SOX2-OT-233ENST00000600778 LINC00575Q6W349 94 aa6.52□□□□□ -1.37
SOX2-OT-233ENST00000600778 Q8N377 158 aa6.52□□□□□ -1.37
SOX2-OT-233ENST00000600778 TEX49A0A1B0GTD5 131 aa6.51□□□□□ -1.37
SOX2-OT-233ENST00000600778 SLC25A20O43772 301 aa6.51□□□□□ -1.37
SOX2-OT-233ENST00000600778 KRTAP13-3Q3SY46 172 aa6.51□□□□□ -1.37
SOX2-OT-233ENST00000600778 LAMTOR3Q9UHA4 124 aa6.51□□□□□ -1.37
SOX2-OT-233ENST00000600778 IGLV5-48A0A075B6I7 105 aa6.5□□□□□ -1.37
SOX2-OT-233ENST00000600778 TMEM238LA0A1B0GVL6 79 aa6.5□□□□□ -1.37
SOX2-OT-233ENST00000600778 LINC01547P58512 204 aaPredicted RBP6.5□□□□□ -1.37
SOX2-OT-233ENST00000600778 RPS29P62273 56 aaKnown RBP6.5□□□□□ -1.37
SOX2-OT-233ENST00000600778 hADV29S1A0JD25 119 aa6.49□□□□□ -1.37
SOX2-OT-233ENST00000600778 BVES-AS1Q5T3Y7 98 aa6.49□□□□□ -1.37
SOX2-OT-233ENST00000600778 SMIM29Q86T20 159 aa6.49□□□□□ -1.37
SOX2-OT-233ENST00000600778 PRO1854Q9UHT4 67 aa6.49□□□□□ -1.37
SOX2-OT-233ENST00000600778 SMIM6P0DI80 62 aa6.47□□□□□ -1.37
SOX2-OT-233ENST00000600778 Q1RN00 199 aa6.47□□□□□ -1.37
SOX2-OT-233ENST00000600778 PRO1933Q9H354 126 aa6.47□□□□□ -1.37
SOX2-OT-233ENST00000600778 LOC105371267A0A1B0GV96 52 aa6.46□□□□□ -1.38
SOX2-OT-233ENST00000600778 H0YGX0 51 aa6.46□□□□□ -1.38
SOX2-OT-233ENST00000600778 K7ERJ3 54 aa6.45□□□□□ -1.38
SOX2-OT-233ENST00000600778 ASB16-AS1Q495Z4 193 aa6.45□□□□□ -1.38
SOX2-OT-233ENST00000600778 HRCT1Q6UXD1 115 aa6.45□□□□□ -1.38
SOX2-OT-233ENST00000600778 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.45□□□□□ -1.38
SOX2-OT-233ENST00000600778 Q6ZQY7 126 aa6.45□□□□□ -1.38
SOX2-OT-233ENST00000600778 FAM218AQ96MZ4 157 aa6.43□□□□□ -1.38
SOX2-OT-233ENST00000600778 SNCGO76070 127 aa6.42□□□□□ -1.38
SOX2-OT-233ENST00000600778 SEC61BP60468 96 aaKnown RBP6.42□□□□□ -1.38
SOX2-OT-233ENST00000600778 TRIAP1O43715 76 aa6.41□□□□□ -1.38
SOX2-OT-233ENST00000600778 PPDPFLQ8WWR9 84 aa6.4□□□□□ -1.38
SOX2-OT-233ENST00000600778 LIMD2Q9BT23 127 aa6.4□□□□□ -1.38
SOX2-OT-233ENST00000600778 KRTAP4-1Q9BYQ7 146 aa6.4□□□□□ -1.38
SOX2-OT-233ENST00000600778 A0A0G2JQZ4 141 aa6.39□□□□□ -1.39
SOX2-OT-233ENST00000600778 A0A1B0GX51 115 aa6.39□□□□□ -1.39
SOX2-OT-233ENST00000600778 F8WEM9 126 aa6.39□□□□□ -1.39
SOX2-OT-233ENST00000600778 PSMB2P49721 201 aa6.39□□□□□ -1.39
SOX2-OT-233ENST00000600778 CD164Q04900 197 aa6.39□□□□□ -1.39
SOX2-OT-233ENST00000600778 OCIAD2Q56VL3 154 aa6.39□□□□□ -1.39
SOX2-OT-233ENST00000600778 SNHG12Q9BXW3 62 aa6.39□□□□□ -1.39
SOX2-OT-233ENST00000600778 KRTAP9-2Q9BYQ4 174 aa6.38□□□□□ -1.39
SOX2-OT-233ENST00000600778 M0R143 59 aa6.37□□□□□ -1.39
SOX2-OT-233ENST00000600778 COX6CP09669 75 aa6.37□□□□□ -1.39
SOX2-OT-233ENST00000600778 IGLV8-61A0A075B6I0 122 aa6.36□□□□□ -1.39
SOX2-OT-233ENST00000600778 TSTD3H0UI37 97 aa6.36□□□□□ -1.39
SOX2-OT-233ENST00000600778 Q6JHZ5 121 aa6.36□□□□□ -1.39
SOX2-OT-233ENST00000600778 CLEC2BQ92478 149 aa6.36□□□□□ -1.39
SOX2-OT-233ENST00000600778 C9orf92A6NGG3 77 aa6.35□□□□□ -1.39
SOX2-OT-233ENST00000600778 SCGB1C2P0DMR2 95 aa6.34□□□□□ -1.39
SOX2-OT-233ENST00000600778 Q5XG85 94 aa6.34□□□□□ -1.39
SOX2-OT-233ENST00000600778 H3BUT2 72 aa6.33□□□□□ -1.4
SOX2-OT-233ENST00000600778 FABP2P12104 132 aa6.33□□□□□ -1.4
SOX2-OT-233ENST00000600778 IGFL1Q6UW32 110 aa6.33□□□□□ -1.4
SOX2-OT-233ENST00000600778 NDUFV3P56181 108 aaKnown RBP6.32□□□□□ -1.4
SOX2-OT-233ENST00000600778 DNAL4O96015 105 aa6.31□□□□□ -1.4
SOX2-OT-233ENST00000600778 ORMDL1Q9P0S3 153 aa6.31□□□□□ -1.4
SOX2-OT-233ENST00000600778 H3BQ85 93 aa6.3□□□□□ -1.4
SOX2-OT-233ENST00000600778 TRACP01848 142 aa6.3□□□□□ -1.4
SOX2-OT-233ENST00000600778 PCOTHQ58A44 107 aa6.3□□□□□ -1.4
SOX2-OT-233ENST00000600778 KRTAP4-8Q9BYQ9 185 aa6.3□□□□□ -1.4
SOX2-OT-233ENST00000600778 TRBV7-7A0A0K0K1E9 115 aa6.29□□□□□ -1.4
SOX2-OT-233ENST00000600778 H3BMG7 143 aa6.29□□□□□ -1.4
SOX2-OT-233ENST00000600778 LST1O00453 97 aa6.29□□□□□ -1.4
SOX2-OT-233ENST00000600778 C1orf195Q5TG92 126 aa6.29□□□□□ -1.4
SOX2-OT-233ENST00000600778 TMEM256-PLSCR3K7ERE1 68 aa6.28□□□□□ -1.4
SOX2-OT-233ENST00000600778 TCL1BO95988 128 aa6.28□□□□□ -1.4
SOX2-OT-233ENST00000600778 BATFQ16520 125 aa6.28□□□□□ -1.4
SOX2-OT-233ENST00000600778 NAA38Q9BRA0 125 aaKnown RBP6.27□□□□□ -1.41
SOX2-OT-233ENST00000600778 UBE2V1Q13404 147 aa6.25□□□□□ -1.41
SOX2-OT-233ENST00000600778 Q6Q795 121 aa6.25□□□□□ -1.41
SOX2-OT-233ENST00000600778 ATXN8Q156A1 80 aa6.24□□□□□ -1.41
SOX2-OT-233ENST00000600778 TEN1Q86WV5 123 aa6.24□□□□□ -1.41
SOX2-OT-233ENST00000600778 BAALC-AS2P0C853 105 aa6.23□□□□□ -1.41
SOX2-OT-233ENST00000600778 ANKRD29Q8N6D5 301 aa6.23□□□□□ -1.41
SOX2-OT-233ENST00000600778 A0A1B0GV72 72 aa6.22□□□□□ -1.41
SOX2-OT-233ENST00000600778 A0A1W2PNM2 257 aa6.21□□□□□ -1.42
SOX2-OT-233ENST00000600778 TAX1BP3O14907 124 aa6.21□□□□□ -1.42
SOX2-OT-233ENST00000600778 A0A087WSZ3 146 aa6.2□□□□□ -1.42
SOX2-OT-233ENST00000600778 C9orf118A6NHY6 69 aa6.2□□□□□ -1.42
SOX2-OT-233ENST00000600778 RPL37P61927 97 aaKnown RBP6.2□□□□□ -1.42
SOX2-OT-233ENST00000600778 KRTAP19-2Q3LHN2 52 aa6.2□□□□□ -1.42
SOX2-OT-233ENST00000600778 LYRM7Q5U5X0 104 aa6.2□□□□□ -1.42
SOX2-OT-233ENST00000600778 TRBV20-1A0A075B6N2 111 aa6.19□□□□□ -1.42
SOX2-OT-233ENST00000600778 SS18L2Q9UHA2 77 aa6.19□□□□□ -1.42
SOX2-OT-233ENST00000600778 RBM3P98179 157 aaKnown RBP6.18□□□□□ -1.42
SOX2-OT-233ENST00000600778 TRBV7-4A0A0J9YYF1 115 aa6.17□□□□□ -1.42
SOX2-OT-233ENST00000600778 KRTAP9-6A0A140TA67 174 aa6.17□□□□□ -1.42
SOX2-OT-233ENST00000600778 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.16□□□□□ -1.42
SOX2-OT-233ENST00000600778 CCKP06307 115 aa6.16□□□□□ -1.42
SOX2-OT-233ENST00000600778 MT1HP80294 61 aa6.16□□□□□ -1.42
SOX2-OT-233ENST00000600778 A0A1W2PPM0 123 aa6.15□□□□□ -1.42
SOX2-OT-233ENST00000600778 DSCR8Q96T75 97 aa6.15□□□□□ -1.42
SOX2-OT-233ENST00000600778 C9JAW5 83 aa6.14□□□□□ -1.43
SOX2-OT-233ENST00000600778 Q96NJ1 140 aa6.13□□□□□ -1.43
SOX2-OT-233ENST00000600778 FLGP20930 4061 aaPredicted RBP6.12□□□□□ -1.43
SOX2-OT-233ENST00000600778 JMJD7-PLA2G4BH0Y9G9 81 aa6.12□□□□□ -1.43
SOX2-OT-233ENST00000600778 COL5A1-AS1Q5SY13 56 aa6.12□□□□□ -1.43
SOX2-OT-233ENST00000600778 OBSCN-AS1Q96MR7 158 aa6.12□□□□□ -1.43
SOX2-OT-233ENST00000600778 VPS25Q9BRG1 176 aa6.12□□□□□ -1.43
SOX2-OT-233ENST00000600778 COX6B2Q6YFQ2 88 aa6.1□□□□□ -1.43
SOX2-OT-233ENST00000600778 LOC110117498A0A087WWA1 95 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms