RNA–Protein interactions for RNA: ENST00000600610.5

GTPBP3-221, Transcript of GTP binding protein 3, mitochondrial, humanhuman

TSL 1 (best)

Gene GTPBP3, Length 1,105 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTPBP3-221ENST00000600610 MOBPQ13875 183 aa12.06□□□□□ -0.48
GTPBP3-221ENST00000600610 C4orf48Q5BLP8 95 aa12.06□□□□□ -0.48
GTPBP3-221ENST00000600610 SMIM29Q86T20 159 aa12.06□□□□□ -0.48
GTPBP3-221ENST00000600610 FAM218AQ96MZ4 157 aa12.06□□□□□ -0.48
GTPBP3-221ENST00000600610 SCGB1C2P0DMR2 95 aa12.05□□□□□ -0.48
GTPBP3-221ENST00000600610 C9orf153Q5TBE3 101 aa12.05□□□□□ -0.48
GTPBP3-221ENST00000600610 HMCN2Q8NDA2 5059 aa12.03□□□□□ -0.48
GTPBP3-221ENST00000600610 DNAL4O96015 105 aa12.03□□□□□ -0.48
GTPBP3-221ENST00000600610 F8WEM9 126 aa12.02□□□□□ -0.49
GTPBP3-221ENST00000600610 SPINK1P00995 79 aa12.02□□□□□ -0.49
GTPBP3-221ENST00000600610 RPS29P62273 56 aaKnown RBP12.02□□□□□ -0.49
GTPBP3-221ENST00000600610 BATFQ16520 125 aa12.02□□□□□ -0.49
GTPBP3-221ENST00000600610 TRACP01848 142 aa12.01□□□□□ -0.49
GTPBP3-221ENST00000600610 LYRM7Q5U5X0 104 aa12.01□□□□□ -0.49
GTPBP3-221ENST00000600610 CLEC2BQ92478 149 aa12.01□□□□□ -0.49
GTPBP3-221ENST00000600610 SNHG12Q9BXW3 62 aa12□□□□□ -0.49
GTPBP3-221ENST00000600610 LST1O00453 97 aa11.98□□□□□ -0.49
GTPBP3-221ENST00000600610 CD164Q04900 197 aa11.98□□□□□ -0.49
GTPBP3-221ENST00000600610 IGLV8-61A0A075B6I0 122 aa11.97□□□□□ -0.49
GTPBP3-221ENST00000600610 ORMDL1Q9P0S3 153 aa11.97□□□□□ -0.49
GTPBP3-221ENST00000600610 Q6JHZ5 121 aa11.96□□□□□ -0.49
GTPBP3-221ENST00000600610 TMEM256-PLSCR3K7ERE1 68 aa11.95□□□□□ -0.5
GTPBP3-221ENST00000600610 TRBV20-1A0A075B6N2 111 aa11.93□□□□□ -0.5
GTPBP3-221ENST00000600610 C9orf118A6NHY6 69 aa11.93□□□□□ -0.5
GTPBP3-221ENST00000600610 ATXN8Q156A1 80 aa11.92□□□□□ -0.5
GTPBP3-221ENST00000600610 NDUFV3P56181 108 aaKnown RBP11.91□□□□□ -0.5
GTPBP3-221ENST00000600610 TAX1BP3O14907 124 aa11.9□□□□□ -0.5
GTPBP3-221ENST00000600610 FABP2P12104 132 aa11.9□□□□□ -0.5
GTPBP3-221ENST00000600610 H3BUT2 72 aa11.89□□□□□ -0.51
GTPBP3-221ENST00000600610 COL5A1-AS1Q5SY13 56 aa11.89□□□□□ -0.51
GTPBP3-221ENST00000600610 UBE2V1Q13404 147 aa11.88□□□□□ -0.51
GTPBP3-221ENST00000600610 TCL1BO95988 128 aa11.87□□□□□ -0.51
GTPBP3-221ENST00000600610 LIMD2Q9BT23 127 aa11.87□□□□□ -0.51
GTPBP3-221ENST00000600610 NAA38Q9BRA0 125 aaKnown RBP11.86□□□□□ -0.51
GTPBP3-221ENST00000600610 Q5XG85 94 aa11.85□□□□□ -0.51
GTPBP3-221ENST00000600610 A0A1W2PPM0 123 aa11.84□□□□□ -0.51
GTPBP3-221ENST00000600610 PCP4L1A6NKN8 68 aa11.83□□□□□ -0.52
GTPBP3-221ENST00000600610 H3BMG7 143 aa11.83□□□□□ -0.52
GTPBP3-221ENST00000600610 IGFL1Q6UW32 110 aa11.82□□□□□ -0.52
GTPBP3-221ENST00000600610 BAALC-AS2P0C853 105 aa11.81□□□□□ -0.52
GTPBP3-221ENST00000600610 FP248Q71RG6 208 aaPredicted RBP11.81□□□□□ -0.52
GTPBP3-221ENST00000600610 Q6Q795 121 aa11.8□□□□□ -0.52
GTPBP3-221ENST00000600610 PRR4Q16378 134 aa11.77□□□□□ -0.53
GTPBP3-221ENST00000600610 HRCT1Q6UXD1 115 aa11.77□□□□□ -0.53
GTPBP3-221ENST00000600610 TEN1Q86WV5 123 aa11.76□□□□□ -0.53
GTPBP3-221ENST00000600610 ANKRD29Q8N6D5 301 aa11.76□□□□□ -0.53
GTPBP3-221ENST00000600610 TRBV7-7A0A0K0K1E9 115 aa11.74□□□□□ -0.53
GTPBP3-221ENST00000600610 LRP2P98164 4655 aa11.74□□□□□ -0.53
GTPBP3-221ENST00000600610 JMJD7-PLA2G4BH0Y9G9 81 aa11.73□□□□□ -0.53
GTPBP3-221ENST00000600610 A0A0G2JQZ4 141 aa11.72□□□□□ -0.53
GTPBP3-221ENST00000600610 RBM3P98179 157 aaKnown RBP11.72□□□□□ -0.53
GTPBP3-221ENST00000600610 ASB16-AS1Q495Z4 193 aa11.72□□□□□ -0.53
GTPBP3-221ENST00000600610 C9JAW5 83 aa11.71□□□□□ -0.53
GTPBP3-221ENST00000600610 RETNLBQ9BQ08 111 aa11.71□□□□□ -0.53
GTPBP3-221ENST00000600610 SPCS1Q9Y6A9 102 aa11.71□□□□□ -0.53
GTPBP3-221ENST00000600610 H3BT86 120 aa11.7□□□□□ -0.54
GTPBP3-221ENST00000600610 UBR4Q5T4S7 5183 aa11.69□□□□□ -0.54
GTPBP3-221ENST00000600610 IGLV7-46A0A075B6I9 117 aa11.69□□□□□ -0.54
GTPBP3-221ENST00000600610 DSCR8Q96T75 97 aa11.69□□□□□ -0.54
GTPBP3-221ENST00000600610 SS18L2Q9UHA2 77 aa11.69□□□□□ -0.54
GTPBP3-221ENST00000600610 TRBV7-4A0A0J9YYF1 115 aa11.68□□□□□ -0.54
GTPBP3-221ENST00000600610 C21orf62-AS1Q17RA5 79 aa11.68□□□□□ -0.54
GTPBP3-221ENST00000600610 PDE6GP18545 87 aa11.65□□□□□ -0.54
GTPBP3-221ENST00000600610 TPRXLQ17RH7 258 aa11.65□□□□□ -0.54
GTPBP3-221ENST00000600610 LPAP08519 4548 aa11.62□□□□□ -0.55
GTPBP3-221ENST00000600610 A0A1W2PNM2 257 aa11.62□□□□□ -0.55
GTPBP3-221ENST00000600610 OBSCN-AS1Q96MR7 158 aa11.62□□□□□ -0.55
GTPBP3-221ENST00000600610 A0A1B0GW54 56 aa11.61□□□□□ -0.55
GTPBP3-221ENST00000600610 K7EP34 96 aa11.61□□□□□ -0.55
GTPBP3-221ENST00000600610 CCKP06307 115 aa11.61□□□□□ -0.55
GTPBP3-221ENST00000600610 C1orf195Q5TG92 126 aa11.61□□□□□ -0.55
GTPBP3-221ENST00000600610 GTF2H5Q6ZYL4 71 aa11.61□□□□□ -0.55
GTPBP3-221ENST00000600610 LOC110117498A0A087WWA1 95 aa11.59□□□□□ -0.55
GTPBP3-221ENST00000600610 A0A087WSZ3 146 aa11.57□□□□□ -0.56
GTPBP3-221ENST00000600610 A0A1B0GV72 72 aa11.57□□□□□ -0.56
GTPBP3-221ENST00000600610 KRTAP13-3Q3SY46 172 aa11.54□□□□□ -0.56
GTPBP3-221ENST00000600610 Q6ZQT0 140 aa11.53□□□□□ -0.56
GTPBP3-221ENST00000600610 CDIP1Q9H305 208 aa11.51□□□□□ -0.57
GTPBP3-221ENST00000600610 PRO0461Q9UI25 63 aa11.5□□□□□ -0.57
GTPBP3-221ENST00000600610 F8W1H4 67 aa11.49□□□□□ -0.57
GTPBP3-221ENST00000600610 MTURNQ8N3F0 131 aa11.49□□□□□ -0.57
GTPBP3-221ENST00000600610 VPS25Q9BRG1 176 aa11.49□□□□□ -0.57
GTPBP3-221ENST00000600610 C14orf132Q9NPU4 83 aa11.49□□□□□ -0.57
GTPBP3-221ENST00000600610 SMCPP49901 116 aaPredicted RBP11.46□□□□□ -0.57
GTPBP3-221ENST00000600610 Q96NJ1 140 aa11.43□□□□□ -0.58
GTPBP3-221ENST00000600610 LINC00472Q9H8W2 130 aa11.41□□□□□ -0.58
GTPBP3-221ENST00000600610 RNF213Q63HN8 5207 aa11.38□□□□□ -0.59
GTPBP3-221ENST00000600610 J3KT08 172 aa11.38□□□□□ -0.59
GTPBP3-221ENST00000600610 XP32Q5T750 250 aa11.37□□□□□ -0.59
GTPBP3-221ENST00000600610 IGKV4-1P06312 121 aa11.35□□□□□ -0.59
GTPBP3-221ENST00000600610 C9orf92A6NGG3 77 aa11.31□□□□□ -0.6
GTPBP3-221ENST00000600610 SIGMAR1Q99720 223 aa11.31□□□□□ -0.6
GTPBP3-221ENST00000600610 NREPQ16612 68 aa11.3□□□□□ -0.6
GTPBP3-221ENST00000600610 SEC61BP60468 96 aaKnown RBP11.29□□□□□ -0.6
GTPBP3-221ENST00000600610 ETDBQ3ZM63 59 aa11.28□□□□□ -0.6
GTPBP3-221ENST00000600610 NDUFB1O75438 58 aa11.24□□□□□ -0.61
GTPBP3-221ENST00000600610 DEFB116Q30KQ4 102 aa11.24□□□□□ -0.61
GTPBP3-221ENST00000600610 A0A1B0GV90 55 aa11.23□□□□□ -0.61
GTPBP3-221ENST00000600610 LINC00313P59037 77 aa11.23□□□□□ -0.61
GTPBP3-221ENST00000600610 C8orf87E5RJ46 101 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms