RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 KRTAP9-2Q9BYQ4 174 aa11.03□□□□□ -0.64
CCDC9-205ENST00000600117 PCP4L1A6NKN8 68 aa11.02□□□□□ -0.65
CCDC9-205ENST00000600117 SMIM29Q86T20 159 aa11.02□□□□□ -0.65
CCDC9-205ENST00000600117 IGLV9-49A0A0B4J1Y8 123 aa11□□□□□ -0.65
CCDC9-205ENST00000600117 TAX1BP3O14907 124 aa10.99□□□□□ -0.65
CCDC9-205ENST00000600117 SCGB1C2P0DMR2 95 aa10.99□□□□□ -0.65
CCDC9-205ENST00000600117 SNCGO76070 127 aa10.98□□□□□ -0.65
CCDC9-205ENST00000600117 MOBPQ13875 183 aa10.98□□□□□ -0.65
CCDC9-205ENST00000600117 LAMTOR3Q9UHA4 124 aa10.98□□□□□ -0.65
CCDC9-205ENST00000600117 LST1O00453 97 aa10.96□□□□□ -0.65
CCDC9-205ENST00000600117 PPDPFLQ8WWR9 84 aa10.96□□□□□ -0.65
CCDC9-205ENST00000600117 FAT4Q6V0I7 4981 aa10.96□□□□□ -0.66
CCDC9-205ENST00000600117 C9orf118A6NHY6 69 aa10.95□□□□□ -0.66
CCDC9-205ENST00000600117 H3BUT2 72 aa10.95□□□□□ -0.66
CCDC9-205ENST00000600117 OCIAD2Q56VL3 154 aa10.95□□□□□ -0.66
CCDC9-205ENST00000600117 SSBP3-AS1Q7Z2R9 100 aa10.95□□□□□ -0.66
CCDC9-205ENST00000600117 C9orf153Q5TBE3 101 aa10.94□□□□□ -0.66
CCDC9-205ENST00000600117 Q8NBF4 154 aa10.94□□□□□ -0.66
CCDC9-205ENST00000600117 TRACP01848 142 aa10.93□□□□□ -0.66
CCDC9-205ENST00000600117 LINC00304Q8N9R0 145 aa10.93□□□□□ -0.66
CCDC9-205ENST00000600117 TCL1BO95988 128 aa10.92□□□□□ -0.66
CCDC9-205ENST00000600117 DNAL4O96015 105 aa10.91□□□□□ -0.66
CCDC9-205ENST00000600117 COL5A1-AS1Q5SY13 56 aa10.91□□□□□ -0.66
CCDC9-205ENST00000600117 LYRM7Q5U5X0 104 aa10.89□□□□□ -0.67
CCDC9-205ENST00000600117 A0A1W2PPM0 123 aa10.88□□□□□ -0.67
CCDC9-205ENST00000600117 ATXN8Q156A1 80 aa10.88□□□□□ -0.67
CCDC9-205ENST00000600117 ORMDL1Q9P0S3 153 aa10.88□□□□□ -0.67
CCDC9-205ENST00000600117 GHRHP01286 108 aa10.87□□□□□ -0.67
CCDC9-205ENST00000600117 IGLV8-61A0A075B6I0 122 aa10.86□□□□□ -0.67
CCDC9-205ENST00000600117 KRTAP9-6A0A140TA67 174 aa10.86□□□□□ -0.67
CCDC9-205ENST00000600117 F8WEM9 126 aa10.85□□□□□ -0.67
CCDC9-205ENST00000600117 FABP2P12104 132 aa10.85□□□□□ -0.67
CCDC9-205ENST00000600117 NDUFV3P56181 108 aaKnown RBP10.85□□□□□ -0.67
CCDC9-205ENST00000600117 SPAG11AQ6PDA7 123 aa10.85□□□□□ -0.67
CCDC9-205ENST00000600117 TRBV20-1A0A075B6N2 111 aa10.84□□□□□ -0.67
CCDC9-205ENST00000600117 H3BQ85 93 aa10.84□□□□□ -0.67
CCDC9-205ENST00000600117 A0A0G2JQZ4 141 aa10.83□□□□□ -0.68
CCDC9-205ENST00000600117 TMEM256-PLSCR3K7ERE1 68 aa10.82□□□□□ -0.68
CCDC9-205ENST00000600117 C4orf48Q5BLP8 95 aa10.82□□□□□ -0.68
CCDC9-205ENST00000600117 A0A0U1RQV1 116 aa10.8□□□□□ -0.68
CCDC9-205ENST00000600117 SPINK1P00995 79 aa10.8□□□□□ -0.68
CCDC9-205ENST00000600117 Q6JHZ5 121 aa10.8□□□□□ -0.68
CCDC9-205ENST00000600117 BAALC-AS2P0C853 105 aa10.79□□□□□ -0.68
CCDC9-205ENST00000600117 UBE2V1Q13404 147 aa10.79□□□□□ -0.68
CCDC9-205ENST00000600117 IGFL1Q6UW32 110 aa10.79□□□□□ -0.68
CCDC9-205ENST00000600117 H3BMG7 143 aa10.77□□□□□ -0.69
CCDC9-205ENST00000600117 RPS29P62273 56 aaKnown RBP10.77□□□□□ -0.69
CCDC9-205ENST00000600117 CD164Q04900 197 aa10.77□□□□□ -0.69
CCDC9-205ENST00000600117 HRCT1Q6UXD1 115 aa10.76□□□□□ -0.69
CCDC9-205ENST00000600117 SPCS1Q9Y6A9 102 aa10.76□□□□□ -0.69
CCDC9-205ENST00000600117 C9JAW5 83 aa10.74□□□□□ -0.69
CCDC9-205ENST00000600117 ANKRD29Q8N6D5 301 aa10.72□□□□□ -0.69
CCDC9-205ENST00000600117 A0A1B0GV72 72 aa10.71□□□□□ -0.69
CCDC9-205ENST00000600117 K7EP34 96 aa10.69□□□□□ -0.7
CCDC9-205ENST00000600117 LCE2AQ5TA79 106 aaPredicted RBP10.69□□□□□ -0.7
CCDC9-205ENST00000600117 RETNLBQ9BQ08 111 aa10.69□□□□□ -0.7
CCDC9-205ENST00000600117 MTURNQ8N3F0 131 aa10.68□□□□□ -0.7
CCDC9-205ENST00000600117 H3BT86 120 aa10.67□□□□□ -0.7
CCDC9-205ENST00000600117 Q5XG85 94 aa10.67□□□□□ -0.7
CCDC9-205ENST00000600117 Q6Q795 121 aa10.67□□□□□ -0.7
CCDC9-205ENST00000600117 TRBV7-7A0A0K0K1E9 115 aa10.66□□□□□ -0.7
CCDC9-205ENST00000600117 LIMD2Q9BT23 127 aa10.66□□□□□ -0.7
CCDC9-205ENST00000600117 TRBV7-4A0A0J9YYF1 115 aa10.65□□□□□ -0.7
CCDC9-205ENST00000600117 A0A1W2PNM2 257 aa10.65□□□□□ -0.7
CCDC9-205ENST00000600117 RBM3P98179 157 aaKnown RBP10.65□□□□□ -0.7
CCDC9-205ENST00000600117 TEN1Q86WV5 123 aa10.64□□□□□ -0.71
CCDC9-205ENST00000600117 PRR4Q16378 134 aa10.63□□□□□ -0.71
CCDC9-205ENST00000600117 SMCPP49901 116 aaPredicted RBP10.62□□□□□ -0.71
CCDC9-205ENST00000600117 OBSCN-AS1Q96MR7 158 aa10.62□□□□□ -0.71
CCDC9-205ENST00000600117 PRO0461Q9UI25 63 aa10.62□□□□□ -0.71
CCDC9-205ENST00000600117 JMJD7-PLA2G4BH0Y9G9 81 aa10.61□□□□□ -0.71
CCDC9-205ENST00000600117 GTF2H5Q6ZYL4 71 aa10.6□□□□□ -0.71
CCDC9-205ENST00000600117 DSCR8Q96T75 97 aa10.59□□□□□ -0.71
CCDC9-205ENST00000600117 FP248Q71RG6 208 aaPredicted RBP10.58□□□□□ -0.72
CCDC9-205ENST00000600117 CCKP06307 115 aa10.57□□□□□ -0.72
CCDC9-205ENST00000600117 ASB16-AS1Q495Z4 193 aa10.57□□□□□ -0.72
CCDC9-205ENST00000600117 LOC110117498A0A087WWA1 95 aa10.56□□□□□ -0.72
CCDC9-205ENST00000600117 C1orf195Q5TG92 126 aa10.56□□□□□ -0.72
CCDC9-205ENST00000600117 IGLV7-46A0A075B6I9 117 aa10.55□□□□□ -0.72
CCDC9-205ENST00000600117 A0A087WSZ3 146 aa10.55□□□□□ -0.72
CCDC9-205ENST00000600117 Q6ZQT0 140 aa10.55□□□□□ -0.72
CCDC9-205ENST00000600117 C14orf132Q9NPU4 83 aa10.55□□□□□ -0.72
CCDC9-205ENST00000600117 SS18L2Q9UHA2 77 aa10.52□□□□□ -0.73
CCDC9-205ENST00000600117 PDE6GP18545 87 aa10.51□□□□□ -0.73
CCDC9-205ENST00000600117 VPS25Q9BRG1 176 aa10.51□□□□□ -0.73
CCDC9-205ENST00000600117 MUC17Q685J3 4493 aa10.49□□□□□ -0.73
CCDC9-205ENST00000600117 F8W1H4 67 aa10.48□□□□□ -0.73
CCDC9-205ENST00000600117 A0A1B0GV90 55 aa10.47□□□□□ -0.73
CCDC9-205ENST00000600117 TPRXLQ17RH7 258 aa10.47□□□□□ -0.73
CCDC9-205ENST00000600117 Q96NJ1 140 aa10.46□□□□□ -0.73
CCDC9-205ENST00000600117 FSIP2Q5CZC0 6907 aa10.46□□□□□ -0.74
CCDC9-205ENST00000600117 KRTAP13-3Q3SY46 172 aa10.45□□□□□ -0.74
CCDC9-205ENST00000600117 C21orf62-AS1Q17RA5 79 aa10.43□□□□□ -0.74
CCDC9-205ENST00000600117 A0A1B0GW54 56 aa10.42□□□□□ -0.74
CCDC9-205ENST00000600117 LINC00472Q9H8W2 130 aa10.4□□□□□ -0.74
CCDC9-205ENST00000600117 ETDBQ3ZM63 59 aa10.39□□□□□ -0.75
CCDC9-205ENST00000600117 CDIP1Q9H305 208 aa10.34□□□□□ -0.75
CCDC9-205ENST00000600117 DEFB116Q30KQ4 102 aa10.33□□□□□ -0.76
CCDC9-205ENST00000600117 C9orf92A6NGG3 77 aa10.32□□□□□ -0.76
CCDC9-205ENST00000600117 IGKV4-1P06312 121 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms