RNA–Protein interactions for RNA: ENST00000594090.5

VRK3-206, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best)

Gene VRK3, Length 1,448 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-206ENST00000594090 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.23□□□□□ -1.09
VRK3-206ENST00000594090 HRCT1Q6UXD1 115 aa8.22□□□□□ -1.09
VRK3-206ENST00000594090 H0YGX0 51 aa8.2□□□□□ -1.1
VRK3-206ENST00000594090 CD164Q04900 197 aa8.2□□□□□ -1.1
VRK3-206ENST00000594090 LIMD2Q9BT23 127 aa8.2□□□□□ -1.1
VRK3-206ENST00000594090 FAM218AQ96MZ4 157 aa8.2□□□□□ -1.1
VRK3-206ENST00000594090 F8WEM9 126 aa8.19□□□□□ -1.1
VRK3-206ENST00000594090 K7ERJ3 54 aa8.19□□□□□ -1.1
VRK3-206ENST00000594090 PPDPFLQ8WWR9 84 aa8.19□□□□□ -1.1
VRK3-206ENST00000594090 A0A0G2JQZ4 141 aa8.18□□□□□ -1.1
VRK3-206ENST00000594090 TRIAP1O43715 76 aa8.18□□□□□ -1.1
VRK3-206ENST00000594090 SMIM6P0DI80 62 aa8.18□□□□□ -1.1
VRK3-206ENST00000594090 CDIP1Q9H305 208 aa8.18□□□□□ -1.1
VRK3-206ENST00000594090 SNCGO76070 127 aa8.17□□□□□ -1.1
VRK3-206ENST00000594090 KRTAP13-3Q3SY46 172 aa8.16□□□□□ -1.1
VRK3-206ENST00000594090 OCIAD2Q56VL3 154 aa8.15□□□□□ -1.1
VRK3-206ENST00000594090 IGLV8-61A0A075B6I0 122 aa8.14□□□□□ -1.11
VRK3-206ENST00000594090 A0A1B0GX51 115 aa8.14□□□□□ -1.11
VRK3-206ENST00000594090 PSMB2P49721 201 aa8.12□□□□□ -1.11
VRK3-206ENST00000594090 Q5XG85 94 aa8.12□□□□□ -1.11
VRK3-206ENST00000594090 Q6JHZ5 121 aa8.12□□□□□ -1.11
VRK3-206ENST00000594090 SNHG12Q9BXW3 62 aa8.12□□□□□ -1.11
VRK3-206ENST00000594090 IGFL1Q6UW32 110 aa8.12□□□□□ -1.11
VRK3-206ENST00000594090 CLEC2BQ92478 149 aa8.12□□□□□ -1.11
VRK3-206ENST00000594090 H3BUT2 72 aa8.09□□□□□ -1.11
VRK3-206ENST00000594090 COX6CP09669 75 aa8.09□□□□□ -1.11
VRK3-206ENST00000594090 GHRHP01286 108 aa8.08□□□□□ -1.12
VRK3-206ENST00000594090 NDUFV3P56181 108 aaKnown RBP8.07□□□□□ -1.12
VRK3-206ENST00000594090 M0R143 59 aa8.06□□□□□ -1.12
VRK3-206ENST00000594090 TCL1BO95988 128 aa8.06□□□□□ -1.12
VRK3-206ENST00000594090 DNAL4O96015 105 aa8.06□□□□□ -1.12
VRK3-206ENST00000594090 C1orf195Q5TG92 126 aa8.06□□□□□ -1.12
VRK3-206ENST00000594090 TRBV7-7A0A0K0K1E9 115 aa8.05□□□□□ -1.12
VRK3-206ENST00000594090 TSTD3H0UI37 97 aa8.04□□□□□ -1.12
VRK3-206ENST00000594090 FABP2P12104 132 aa8.04□□□□□ -1.12
VRK3-206ENST00000594090 ORMDL1Q9P0S3 153 aa8.04□□□□□ -1.12
VRK3-206ENST00000594090 MUC17Q685J3 4493 aa8.03□□□□□ -1.12
VRK3-206ENST00000594090 H3BMG7 143 aa8.02□□□□□ -1.13
VRK3-206ENST00000594090 H3BQ85 93 aa8.02□□□□□ -1.13
VRK3-206ENST00000594090 ASB16-AS1Q495Z4 193 aa8.02□□□□□ -1.13
VRK3-206ENST00000594090 RNF213Q63HN8 5207 aa8.01□□□□□ -1.13
VRK3-206ENST00000594090 LST1O00453 97 aa8.01□□□□□ -1.13
VRK3-206ENST00000594090 TRACP01848 142 aa8.01□□□□□ -1.13
VRK3-206ENST00000594090 SCGB1C2P0DMR2 95 aa8.01□□□□□ -1.13
VRK3-206ENST00000594090 XP32Q5T750 250 aa8.01□□□□□ -1.13
VRK3-206ENST00000594090 Q6Q795 121 aa8□□□□□ -1.13
VRK3-206ENST00000594090 C9orf92A6NGG3 77 aa7.99□□□□□ -1.13
VRK3-206ENST00000594090 TMEM256-PLSCR3K7ERE1 68 aa7.99□□□□□ -1.13
VRK3-206ENST00000594090 TEN1Q86WV5 123 aa7.98□□□□□ -1.13
VRK3-206ENST00000594090 SEC61BP60468 96 aaKnown RBP7.96□□□□□ -1.13
VRK3-206ENST00000594090 A0A1B0GV72 72 aa7.95□□□□□ -1.14
VRK3-206ENST00000594090 NAA38Q9BRA0 125 aaKnown RBP7.95□□□□□ -1.14
VRK3-206ENST00000594090 UBE2V1Q13404 147 aa7.95□□□□□ -1.14
VRK3-206ENST00000594090 SS18L2Q9UHA2 77 aa7.95□□□□□ -1.14
VRK3-206ENST00000594090 A0A1W2PNM2 257 aa7.94□□□□□ -1.14
VRK3-206ENST00000594090 BATFQ16520 125 aa7.94□□□□□ -1.14
VRK3-206ENST00000594090 A0A087WSZ3 146 aa7.93□□□□□ -1.14
VRK3-206ENST00000594090 ANKRD29Q8N6D5 301 aa7.93□□□□□ -1.14
VRK3-206ENST00000594090 MUC2Q02817 5179 aa7.92□□□□□ -1.14
VRK3-206ENST00000594090 A0A0U1RQV1 116 aa7.91□□□□□ -1.14
VRK3-206ENST00000594090 ATXN8Q156A1 80 aa7.91□□□□□ -1.14
VRK3-206ENST00000594090 BAALC-AS2P0C853 105 aa7.89□□□□□ -1.15
VRK3-206ENST00000594090 LYRM7Q5U5X0 104 aa7.89□□□□□ -1.15
VRK3-206ENST00000594090 TRBV7-4A0A0J9YYF1 115 aa7.88□□□□□ -1.15
VRK3-206ENST00000594090 CCKP06307 115 aa7.87□□□□□ -1.15
VRK3-206ENST00000594090 KRTAP4-1Q9BYQ7 146 aa7.87□□□□□ -1.15
VRK3-206ENST00000594090 SVIPQ8NHG7 77 aa7.86□□□□□ -1.15
VRK3-206ENST00000594090 Q96NJ1 140 aa7.86□□□□□ -1.15
VRK3-206ENST00000594090 RBM3P98179 157 aaKnown RBP7.86□□□□□ -1.15
VRK3-206ENST00000594090 PCOTHQ58A44 107 aa7.85□□□□□ -1.15
VRK3-206ENST00000594090 TRBV20-1A0A075B6N2 111 aa7.84□□□□□ -1.15
VRK3-206ENST00000594090 RPL37P61927 97 aaKnown RBP7.84□□□□□ -1.15
VRK3-206ENST00000594090 DSCR8Q96T75 97 aa7.84□□□□□ -1.15
VRK3-206ENST00000594090 C9orf118A6NHY6 69 aa7.83□□□□□ -1.16
VRK3-206ENST00000594090 TAX1BP3O14907 124 aa7.83□□□□□ -1.16
VRK3-206ENST00000594090 OBSCN-AS1Q96MR7 158 aa7.82□□□□□ -1.16
VRK3-206ENST00000594090 VPS25Q9BRG1 176 aa7.81□□□□□ -1.16
VRK3-206ENST00000594090 C9JAW5 83 aa7.8□□□□□ -1.16
VRK3-206ENST00000594090 A0A1W2PPM0 123 aa7.79□□□□□ -1.16
VRK3-206ENST00000594090 SIGMAR1Q99720 223 aa7.79□□□□□ -1.16
VRK3-206ENST00000594090 JMJD7-PLA2G4BH0Y9G9 81 aa7.78□□□□□ -1.16
VRK3-206ENST00000594090 LINC00472Q9H8W2 130 aa7.78□□□□□ -1.16
VRK3-206ENST00000594090 IGKV4-1P06312 121 aa7.77□□□□□ -1.17
VRK3-206ENST00000594090 Q6ZQT0 140 aa7.76□□□□□ -1.17
VRK3-206ENST00000594090 Q75L30 129 aa7.76□□□□□ -1.17
VRK3-206ENST00000594090 FAT4Q6V0I7 4981 aa7.76□□□□□ -1.17
VRK3-206ENST00000594090 LOC110117498A0A087WWA1 95 aa7.75□□□□□ -1.17
VRK3-206ENST00000594090 PCP4L1A6NKN8 68 aa7.74□□□□□ -1.17
VRK3-206ENST00000594090 DEFB116Q30KQ4 102 aa7.74□□□□□ -1.17
VRK3-206ENST00000594090 LCE2AQ5TA79 106 aaPredicted RBP7.74□□□□□ -1.17
VRK3-206ENST00000594090 DSCR10P59022 87 aa7.73□□□□□ -1.17
VRK3-206ENST00000594090 C21orf62-AS1Q17RA5 79 aa7.73□□□□□ -1.17
VRK3-206ENST00000594090 C14orf132Q9NPU4 83 aa7.73□□□□□ -1.17
VRK3-206ENST00000594090 H3BT86 120 aa7.72□□□□□ -1.17
VRK3-206ENST00000594090 MTURNQ8N3F0 131 aa7.72□□□□□ -1.17
VRK3-206ENST00000594090 PDE6GP18545 87 aa7.71□□□□□ -1.17
VRK3-206ENST00000594090 COL5A1-AS1Q5SY13 56 aa7.71□□□□□ -1.17
VRK3-206ENST00000594090 C20orf166-AS1Q96NR2 134 aa7.71□□□□□ -1.17
VRK3-206ENST00000594090 A0A1B0GW54 56 aa7.69□□□□□ -1.18
VRK3-206ENST00000594090 SPCS1Q9Y6A9 102 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 116.6 ms