RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 LIMD2Q9BT23 127 aa5.73□□□□□ -1.49
BRCA1-227ENST00000591849 A0A0U1RQV1 116 aa5.72□□□□□ -1.49
BRCA1-227ENST00000591849 HSD52Q0P140 79 aa5.72□□□□□ -1.49
BRCA1-227ENST00000591849 Q8N377 158 aa5.72□□□□□ -1.49
BRCA1-227ENST00000591849 SNHG12Q9BXW3 62 aa5.72□□□□□ -1.49
BRCA1-227ENST00000591849 H0YGX0 51 aa5.71□□□□□ -1.5
BRCA1-227ENST00000591849 LINC01547P58512 204 aaPredicted RBP5.71□□□□□ -1.5
BRCA1-227ENST00000591849 TPRXLQ17RH7 258 aa5.71□□□□□ -1.5
BRCA1-227ENST00000591849 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.71□□□□□ -1.5
BRCA1-227ENST00000591849 SMIM29Q86T20 159 aa5.71□□□□□ -1.5
BRCA1-227ENST00000591849 PRO1854Q9UHT4 67 aa5.71□□□□□ -1.5
BRCA1-227ENST00000591849 LPAP08519 4548 aa5.71□□□□□ -1.5
BRCA1-227ENST00000591849 FXYD2P54710 66 aa5.69□□□□□ -1.5
BRCA1-227ENST00000591849 CD164Q04900 197 aa5.69□□□□□ -1.5
BRCA1-227ENST00000591849 PSMB2P49721 201 aa5.68□□□□□ -1.5
BRCA1-227ENST00000591849 A0A0G2JQZ4 141 aa5.67□□□□□ -1.5
BRCA1-227ENST00000591849 GHRHP01286 108 aa5.67□□□□□ -1.5
BRCA1-227ENST00000591849 OCIAD2Q56VL3 154 aa5.67□□□□□ -1.5
BRCA1-227ENST00000591849 Q6JHZ5 121 aa5.67□□□□□ -1.5
BRCA1-227ENST00000591849 PPDPFLQ8WWR9 84 aa5.67□□□□□ -1.5
BRCA1-227ENST00000591849 COX6CP09669 75 aa5.66□□□□□ -1.5
BRCA1-227ENST00000591849 TCL1BO95988 128 aa5.65□□□□□ -1.5
BRCA1-227ENST00000591849 COL5A1-AS1Q5SY13 56 aa5.65□□□□□ -1.5
BRCA1-227ENST00000591849 A0A1B0GX51 115 aa5.64□□□□□ -1.51
BRCA1-227ENST00000591849 K7ERJ3 54 aa5.64□□□□□ -1.51
BRCA1-227ENST00000591849 FABP2P12104 132 aa5.64□□□□□ -1.51
BRCA1-227ENST00000591849 KRTAP13-3Q3SY46 172 aa5.64□□□□□ -1.51
BRCA1-227ENST00000591849 TRIAP1O43715 76 aa5.63□□□□□ -1.51
BRCA1-227ENST00000591849 DNAL4O96015 105 aa5.63□□□□□ -1.51
BRCA1-227ENST00000591849 BATFQ16520 125 aa5.63□□□□□ -1.51
BRCA1-227ENST00000591849 FAM218AQ96MZ4 157 aa5.63□□□□□ -1.51
BRCA1-227ENST00000591849 MUC2Q02817 5179 aa5.63□□□□□ -1.51
BRCA1-227ENST00000591849 SCGB1C2P0DMR2 95 aa5.62□□□□□ -1.51
BRCA1-227ENST00000591849 CLEC2BQ92478 149 aa5.62□□□□□ -1.51
BRCA1-227ENST00000591849 IGLV8-61A0A075B6I0 122 aa5.61□□□□□ -1.51
BRCA1-227ENST00000591849 H3BUT2 72 aa5.61□□□□□ -1.51
BRCA1-227ENST00000591849 NDUFV3P56181 108 aaKnown RBP5.61□□□□□ -1.51
BRCA1-227ENST00000591849 Q5XG85 94 aa5.61□□□□□ -1.51
BRCA1-227ENST00000591849 IGFL1Q6UW32 110 aa5.61□□□□□ -1.51
BRCA1-227ENST00000591849 TRBV7-7A0A0K0K1E9 115 aa5.59□□□□□ -1.51
BRCA1-227ENST00000591849 C9orf92A6NGG3 77 aa5.59□□□□□ -1.51
BRCA1-227ENST00000591849 H3BQ85 93 aa5.59□□□□□ -1.51
BRCA1-227ENST00000591849 SEC61BP60468 96 aaKnown RBP5.59□□□□□ -1.51
BRCA1-227ENST00000591849 C1orf195Q5TG92 126 aa5.59□□□□□ -1.51
BRCA1-227ENST00000591849 ORMDL1Q9P0S3 153 aa5.59□□□□□ -1.51
BRCA1-227ENST00000591849 H3BMG7 143 aa5.58□□□□□ -1.52
BRCA1-227ENST00000591849 LYRM7Q5U5X0 104 aa5.56□□□□□ -1.52
BRCA1-227ENST00000591849 TMEM256-PLSCR3K7ERE1 68 aa5.55□□□□□ -1.52
BRCA1-227ENST00000591849 LST1O00453 97 aa5.55□□□□□ -1.52
BRCA1-227ENST00000591849 SS18L2Q9UHA2 77 aa5.55□□□□□ -1.52
BRCA1-227ENST00000591849 A0A1B0GV72 72 aa5.54□□□□□ -1.52
BRCA1-227ENST00000591849 ASB16-AS1Q495Z4 193 aa5.54□□□□□ -1.52
BRCA1-227ENST00000591849 XP32Q5T750 250 aa5.54□□□□□ -1.52
BRCA1-227ENST00000591849 TEN1Q86WV5 123 aa5.54□□□□□ -1.52
BRCA1-227ENST00000591849 ANKRD29Q8N6D5 301 aa5.54□□□□□ -1.52
BRCA1-227ENST00000591849 KRTAP9-2Q9BYQ4 174 aa5.54□□□□□ -1.52
BRCA1-227ENST00000591849 C9orf118A6NHY6 69 aa5.53□□□□□ -1.52
BRCA1-227ENST00000591849 TAX1BP3O14907 124 aa5.53□□□□□ -1.52
BRCA1-227ENST00000591849 TRACP01848 142 aa5.53□□□□□ -1.52
BRCA1-227ENST00000591849 Q6Q795 121 aa5.52□□□□□ -1.53
BRCA1-227ENST00000591849 A0A087WSZ3 146 aa5.51□□□□□ -1.53
BRCA1-227ENST00000591849 LCE2AQ5TA79 106 aaPredicted RBP5.51□□□□□ -1.53
BRCA1-227ENST00000591849 FAT4Q6V0I7 4981 aa5.5□□□□□ -1.53
BRCA1-227ENST00000591849 A0A1W2PPM0 123 aa5.5□□□□□ -1.53
BRCA1-227ENST00000591849 BAALC-AS2P0C853 105 aa5.5□□□□□ -1.53
BRCA1-227ENST00000591849 UBE2V1Q13404 147 aa5.5□□□□□ -1.53
BRCA1-227ENST00000591849 NAA38Q9BRA0 125 aaKnown RBP5.5□□□□□ -1.53
BRCA1-227ENST00000591849 ATXN8Q156A1 80 aa5.49□□□□□ -1.53
BRCA1-227ENST00000591849 GTF2H5Q6ZYL4 71 aa5.49□□□□□ -1.53
BRCA1-227ENST00000591849 MUC17Q685J3 4493 aa5.48□□□□□ -1.53
BRCA1-227ENST00000591849 TRBV20-1A0A075B6N2 111 aa5.48□□□□□ -1.53
BRCA1-227ENST00000591849 RBM3P98179 157 aaKnown RBP5.48□□□□□ -1.53
BRCA1-227ENST00000591849 PCOTHQ58A44 107 aa5.48□□□□□ -1.53
BRCA1-227ENST00000591849 DSCR8Q96T75 97 aa5.48□□□□□ -1.53
BRCA1-227ENST00000591849 A0A1B0GV90 55 aa5.47□□□□□ -1.53
BRCA1-227ENST00000591849 A0A1W2PNM2 257 aa5.47□□□□□ -1.53
BRCA1-227ENST00000591849 CCKP06307 115 aa5.47□□□□□ -1.53
BRCA1-227ENST00000591849 VPS25Q9BRG1 176 aa5.47□□□□□ -1.53
BRCA1-227ENST00000591849 TRBV7-4A0A0J9YYF1 115 aa5.46□□□□□ -1.54
BRCA1-227ENST00000591849 OBSCN-AS1Q96MR7 158 aa5.46□□□□□ -1.54
BRCA1-227ENST00000591849 SIGMAR1Q99720 223 aa5.45□□□□□ -1.54
BRCA1-227ENST00000591849 SPCS1Q9Y6A9 102 aa5.45□□□□□ -1.54
BRCA1-227ENST00000591849 C9JAW5 83 aa5.44□□□□□ -1.54
BRCA1-227ENST00000591849 K7EP34 96 aa5.44□□□□□ -1.54
BRCA1-227ENST00000591849 RPL37P61927 97 aaKnown RBP5.44□□□□□ -1.54
BRCA1-227ENST00000591849 Q96NJ1 140 aa5.44□□□□□ -1.54
BRCA1-227ENST00000591849 KRTAP9-6A0A140TA67 174 aa5.42□□□□□ -1.54
BRCA1-227ENST00000591849 IGKV4-1P06312 121 aa5.42□□□□□ -1.54
BRCA1-227ENST00000591849 ATP11AUNQ6ZP68 121 aa5.42□□□□□ -1.54
BRCA1-227ENST00000591849 KRTAP4-1Q9BYQ7 146 aa5.42□□□□□ -1.54
BRCA1-227ENST00000591849 JMJD7-PLA2G4BH0Y9G9 81 aa5.41□□□□□ -1.54
BRCA1-227ENST00000591849 C21orf62-AS1Q17RA5 79 aa5.41□□□□□ -1.54
BRCA1-227ENST00000591849 DEFB116Q30KQ4 102 aa5.4□□□□□ -1.54
BRCA1-227ENST00000591849 DSCR10P59022 87 aa5.39□□□□□ -1.55
BRCA1-227ENST00000591849 F8W1H4 67 aa5.38□□□□□ -1.55
BRCA1-227ENST00000591849 PDE6GP18545 87 aa5.38□□□□□ -1.55
BRCA1-227ENST00000591849 LINC00313P59037 77 aa5.38□□□□□ -1.55
BRCA1-227ENST00000591849 Q75L30 129 aa5.38□□□□□ -1.55
BRCA1-227ENST00000591849 IGHV6-1A0A0B4J1U7 121 aa5.36□□□□□ -1.55
BRCA1-227ENST00000591849 LINC00472Q9H8W2 130 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 239.3 ms