RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 FAM218AQ96MZ4 157 aa11.47□□□□□ -0.57
CIRBP-220ENST00000588917 DNAL4O96015 105 aa11.46□□□□□ -0.57
CIRBP-220ENST00000588917 SPAG11AQ6PDA7 123 aa11.46□□□□□ -0.57
CIRBP-220ENST00000588917 MOBPQ13875 183 aa11.45□□□□□ -0.58
CIRBP-220ENST00000588917 C4orf48Q5BLP8 95 aa11.45□□□□□ -0.58
CIRBP-220ENST00000588917 C9orf153Q5TBE3 101 aa11.45□□□□□ -0.58
CIRBP-220ENST00000588917 CLEC2BQ92478 149 aa11.45□□□□□ -0.58
CIRBP-220ENST00000588917 H3BQ85 93 aa11.44□□□□□ -0.58
CIRBP-220ENST00000588917 LINC00304Q8N9R0 145 aa11.44□□□□□ -0.58
CIRBP-220ENST00000588917 LYRM7Q5U5X0 104 aa11.43□□□□□ -0.58
CIRBP-220ENST00000588917 SMIM29Q86T20 159 aa11.43□□□□□ -0.58
CIRBP-220ENST00000588917 Q8NBF4 154 aa11.43□□□□□ -0.58
CIRBP-220ENST00000588917 SNHG12Q9BXW3 62 aa11.43□□□□□ -0.58
CIRBP-220ENST00000588917 F8WEM9 126 aa11.41□□□□□ -0.58
CIRBP-220ENST00000588917 TRACP01848 142 aa11.4□□□□□ -0.58
CIRBP-220ENST00000588917 PCP4L1A6NKN8 68 aa11.39□□□□□ -0.59
CIRBP-220ENST00000588917 LST1O00453 97 aa11.39□□□□□ -0.59
CIRBP-220ENST00000588917 C9orf118A6NHY6 69 aa11.38□□□□□ -0.59
CIRBP-220ENST00000588917 ORMDL1Q9P0S3 153 aa11.38□□□□□ -0.59
CIRBP-220ENST00000588917 SPINK1P00995 79 aa11.37□□□□□ -0.59
CIRBP-220ENST00000588917 TRBV20-1A0A075B6N2 111 aa11.36□□□□□ -0.59
CIRBP-220ENST00000588917 H3BUT2 72 aa11.36□□□□□ -0.59
CIRBP-220ENST00000588917 TMEM256-PLSCR3K7ERE1 68 aa11.36□□□□□ -0.59
CIRBP-220ENST00000588917 TAX1BP3O14907 124 aa11.36□□□□□ -0.59
CIRBP-220ENST00000588917 ATXN8Q156A1 80 aa11.36□□□□□ -0.59
CIRBP-220ENST00000588917 COL5A1-AS1Q5SY13 56 aa11.36□□□□□ -0.59
CIRBP-220ENST00000588917 NAA38Q9BRA0 125 aaKnown RBP11.36□□□□□ -0.59
CIRBP-220ENST00000588917 FABP2P12104 132 aa11.35□□□□□ -0.59
CIRBP-220ENST00000588917 Q6JHZ5 121 aa11.33□□□□□ -0.6
CIRBP-220ENST00000588917 LRP2P98164 4655 aa11.32□□□□□ -0.6
CIRBP-220ENST00000588917 NDUFV3P56181 108 aaKnown RBP11.32□□□□□ -0.6
CIRBP-220ENST00000588917 IGLV8-61A0A075B6I0 122 aa11.31□□□□□ -0.6
CIRBP-220ENST00000588917 TCL1BO95988 128 aa11.31□□□□□ -0.6
CIRBP-220ENST00000588917 RPS29P62273 56 aaKnown RBP11.31□□□□□ -0.6
CIRBP-220ENST00000588917 CD164Q04900 197 aa11.31□□□□□ -0.6
CIRBP-220ENST00000588917 A0A1W2PPM0 123 aa11.29□□□□□ -0.6
CIRBP-220ENST00000588917 RNF213Q63HN8 5207 aa11.28□□□□□ -0.6
CIRBP-220ENST00000588917 UBE2V1Q13404 147 aa11.27□□□□□ -0.61
CIRBP-220ENST00000588917 H3BMG7 143 aa11.26□□□□□ -0.61
CIRBP-220ENST00000588917 BAALC-AS2P0C853 105 aa11.26□□□□□ -0.61
CIRBP-220ENST00000588917 LIMD2Q9BT23 127 aa11.23□□□□□ -0.61
CIRBP-220ENST00000588917 IGFL1Q6UW32 110 aa11.22□□□□□ -0.61
CIRBP-220ENST00000588917 HRCT1Q6UXD1 115 aa11.22□□□□□ -0.61
CIRBP-220ENST00000588917 ANKRD29Q8N6D5 301 aa11.2□□□□□ -0.62
CIRBP-220ENST00000588917 A0A0G2JQZ4 141 aa11.17□□□□□ -0.62
CIRBP-220ENST00000588917 C9JAW5 83 aa11.17□□□□□ -0.62
CIRBP-220ENST00000588917 SPCS1Q9Y6A9 102 aa11.17□□□□□ -0.62
CIRBP-220ENST00000588917 RBM3P98179 157 aaKnown RBP11.16□□□□□ -0.62
CIRBP-220ENST00000588917 PRR4Q16378 134 aa11.16□□□□□ -0.62
CIRBP-220ENST00000588917 Q5XG85 94 aa11.16□□□□□ -0.62
CIRBP-220ENST00000588917 Q6Q795 121 aa11.15□□□□□ -0.62
CIRBP-220ENST00000588917 TEN1Q86WV5 123 aa11.15□□□□□ -0.62
CIRBP-220ENST00000588917 JMJD7-PLA2G4BH0Y9G9 81 aa11.14□□□□□ -0.63
CIRBP-220ENST00000588917 FP248Q71RG6 208 aaPredicted RBP11.13□□□□□ -0.63
CIRBP-220ENST00000588917 DSCR8Q96T75 97 aa11.13□□□□□ -0.63
CIRBP-220ENST00000588917 TRBV7-7A0A0K0K1E9 115 aa11.12□□□□□ -0.63
CIRBP-220ENST00000588917 H3BT86 120 aa11.12□□□□□ -0.63
CIRBP-220ENST00000588917 RETNLBQ9BQ08 111 aa11.12□□□□□ -0.63
CIRBP-220ENST00000588917 A0A1B0GV72 72 aa11.08□□□□□ -0.64
CIRBP-220ENST00000588917 GTF2H5Q6ZYL4 71 aa11.08□□□□□ -0.64
CIRBP-220ENST00000588917 TRBV7-4A0A0J9YYF1 115 aa11.07□□□□□ -0.64
CIRBP-220ENST00000588917 K7EP34 96 aa11.07□□□□□ -0.64
CIRBP-220ENST00000588917 SS18L2Q9UHA2 77 aa11.07□□□□□ -0.64
CIRBP-220ENST00000588917 IGLV7-46A0A075B6I9 117 aa11.06□□□□□ -0.64
CIRBP-220ENST00000588917 PDE6GP18545 87 aa11.06□□□□□ -0.64
CIRBP-220ENST00000588917 ASB16-AS1Q495Z4 193 aa11.06□□□□□ -0.64
CIRBP-220ENST00000588917 A0A1W2PNM2 257 aa11.04□□□□□ -0.64
CIRBP-220ENST00000588917 CCKP06307 115 aa11.04□□□□□ -0.64
CIRBP-220ENST00000588917 C21orf62-AS1Q17RA5 79 aa11.03□□□□□ -0.64
CIRBP-220ENST00000588917 OBSCN-AS1Q96MR7 158 aa11.01□□□□□ -0.65
CIRBP-220ENST00000588917 A0A087WSZ3 146 aa11□□□□□ -0.65
CIRBP-220ENST00000588917 LOC110117498A0A087WWA1 95 aa11□□□□□ -0.65
CIRBP-220ENST00000588917 C1orf195Q5TG92 126 aa11□□□□□ -0.65
CIRBP-220ENST00000588917 MTURNQ8N3F0 131 aa11□□□□□ -0.65
CIRBP-220ENST00000588917 A0A1B0GW54 56 aa10.98□□□□□ -0.65
CIRBP-220ENST00000588917 TPRXLQ17RH7 258 aa10.98□□□□□ -0.65
CIRBP-220ENST00000588917 VPS25Q9BRG1 176 aa10.98□□□□□ -0.65
CIRBP-220ENST00000588917 F8W1H4 67 aa10.96□□□□□ -0.65
CIRBP-220ENST00000588917 Q6ZQT0 140 aa10.96□□□□□ -0.65
CIRBP-220ENST00000588917 C14orf132Q9NPU4 83 aa10.95□□□□□ -0.66
CIRBP-220ENST00000588917 LPAP08519 4548 aa10.94□□□□□ -0.66
CIRBP-220ENST00000588917 PRO0461Q9UI25 63 aa10.94□□□□□ -0.66
CIRBP-220ENST00000588917 SMCPP49901 116 aaPredicted RBP10.93□□□□□ -0.66
CIRBP-220ENST00000588917 CDIP1Q9H305 208 aa10.91□□□□□ -0.66
CIRBP-220ENST00000588917 KRTAP13-3Q3SY46 172 aa10.89□□□□□ -0.67
CIRBP-220ENST00000588917 Q96NJ1 140 aa10.82□□□□□ -0.68
CIRBP-220ENST00000588917 LINC00472Q9H8W2 130 aa10.82□□□□□ -0.68
CIRBP-220ENST00000588917 J3KT08 172 aa10.79□□□□□ -0.68
CIRBP-220ENST00000588917 IGKV4-1P06312 121 aa10.79□□□□□ -0.68
CIRBP-220ENST00000588917 MUC2Q02817 5179 aa10.78□□□□□ -0.68
CIRBP-220ENST00000588917 A0A1B0GV90 55 aa10.77□□□□□ -0.69
CIRBP-220ENST00000588917 NREPQ16612 68 aa10.77□□□□□ -0.69
CIRBP-220ENST00000588917 ETDBQ3ZM63 59 aa10.77□□□□□ -0.69
CIRBP-220ENST00000588917 C9orf92A6NGG3 77 aa10.76□□□□□ -0.69
CIRBP-220ENST00000588917 SIGMAR1Q99720 223 aa10.76□□□□□ -0.69
CIRBP-220ENST00000588917 DEFB116Q30KQ4 102 aa10.74□□□□□ -0.69
CIRBP-220ENST00000588917 XP32Q5T750 250 aa10.71□□□□□ -0.69
CIRBP-220ENST00000588917 A0A0U1RQV1 116 aa10.69□□□□□ -0.7
CIRBP-220ENST00000588917 NDUFB1O75438 58 aa10.69□□□□□ -0.7
CIRBP-220ENST00000588917 SEC61BP60468 96 aaKnown RBP10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms