RNA–Protein interactions for RNA: ENST00000587476.1

TUBD1-207, Transcript of tubulin delta 1, humanhuman

TSL 3

Gene TUBD1, Length 825 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-207ENST00000587476 MAST1Q9Y2H9 1570 aa0.28□□□□□ -2.36
TUBD1-207ENST00000587476 H0YGX0 51 aa0.28□□□□□ -2.36
TUBD1-207ENST00000587476 LINC00308Q8TCZ7 52 aa0.28□□□□□ -2.36
TUBD1-207ENST00000587476 CNOT1A5YKK6 2376 aaKnown RBP0.28□□□□□ -2.36
TUBD1-207ENST00000587476 GVINP1Q7Z2Y8 2422 aa0.28□□□□□ -2.36
TUBD1-207ENST00000587476 EFCAB6Q5THR3 1501 aa0.28□□□□□ -2.37
TUBD1-207ENST00000587476 SYCP2Q9BX26 1530 aa0.28□□□□□ -2.37
TUBD1-207ENST00000587476 HRNRQ86YZ3 2850 aaPredicted RBP0.27□□□□□ -2.37
TUBD1-207ENST00000587476 RNF17Q9BXT8 1623 aaKnown RBP0.27□□□□□ -2.37
TUBD1-207ENST00000587476 RPS27P42677 84 aaKnown RBP0.27□□□□□ -2.37
TUBD1-207ENST00000587476 RPS27LQ71UM5 84 aaKnown RBP0.27□□□□□ -2.37
TUBD1-207ENST00000587476 TMEM167BQ9NRX6 74 aa0.27□□□□□ -2.37
TUBD1-207ENST00000587476 ABRACLQ9P1F3 81 aa0.27□□□□□ -2.37
TUBD1-207ENST00000587476 TIMM8BQ9Y5J9 83 aaPredicted RBP0.27□□□□□ -2.37
TUBD1-207ENST00000587476 AGLP35573 1532 aa0.27□□□□□ -2.37
TUBD1-207ENST00000587476 DEPDC5O75140 1603 aa0.27□□□□□ -2.37
TUBD1-207ENST00000587476 MROH2AA6NES4 1674 aa0.27□□□□□ -2.37
TUBD1-207ENST00000587476 SMIM27A0A1W2PRY6 76 aa0.26□□□□□ -2.37
TUBD1-207ENST00000587476 DEFB135Q30KP9 77 aa0.26□□□□□ -2.37
TUBD1-207ENST00000587476 TOMM5Q8N4H5 51 aa0.26□□□□□ -2.37
TUBD1-207ENST00000587476 KIAA0586Q9BVV6 1533 aa0.26□□□□□ -2.37
TUBD1-207ENST00000587476 C3P01024 1663 aa0.26□□□□□ -2.37
TUBD1-207ENST00000587476 DDX60LQ5H9U9 1706 aaKnown RBP0.25□□□□□ -2.37
TUBD1-207ENST00000587476 KIF1AQ12756 1690 aa0.25□□□□□ -2.37
TUBD1-207ENST00000587476 ITSN2Q9NZM3 1697 aa0.25□□□□□ -2.37
TUBD1-207ENST00000587476 ADCY10Q96PN6 1610 aa0.25□□□□□ -2.37
TUBD1-207ENST00000587476 M0R2T5 61 aa0.25□□□□□ -2.37
TUBD1-207ENST00000587476 WT1-ASQ06250 92 aa0.25□□□□□ -2.37
TUBD1-207ENST00000587476 DEFB106AQ8N104 65 aa0.25□□□□□ -2.37
TUBD1-207ENST00000587476 S4R3F8 94 aa0.25□□□□□ -2.37
TUBD1-207ENST00000587476 CSMD3Q7Z407 3707 aa0.25□□□□□ -2.37
TUBD1-207ENST00000587476 KMT2DO14686 5537 aa0.25□□□□□ -2.37
TUBD1-207ENST00000587476 LY75O60449 1722 aa0.24□□□□□ -2.37
TUBD1-207ENST00000587476 TJP1Q07157 1748 aa0.24□□□□□ -2.37
TUBD1-207ENST00000587476 HIVEP3Q5T1R4 2406 aa0.24□□□□□ -2.37
TUBD1-207ENST00000587476 LINC01546A6NGU7 62 aa0.24□□□□□ -2.37
TUBD1-207ENST00000587476 H0YGG7 62 aa0.24□□□□□ -2.37
TUBD1-207ENST00000587476 PRM1P04553 51 aa0.24□□□□□ -2.37
TUBD1-207ENST00000587476 TFF3Q07654 80 aa0.24□□□□□ -2.37
TUBD1-207ENST00000587476 ABCA2Q9BZC7 2435 aa0.24□□□□□ -2.37
TUBD1-207ENST00000587476 C4AP0C0L4 1744 aa0.24□□□□□ -2.37
TUBD1-207ENST00000587476 C4BP0C0L5 1744 aa0.24□□□□□ -2.37
TUBD1-207ENST00000587476 CSPG4Q6UVK1 2322 aa0.24□□□□□ -2.37
TUBD1-207ENST00000587476 KNL1Q8NG31 2342 aa0.24□□□□□ -2.37
TUBD1-207ENST00000587476 ABCC8Q09428 1581 aa0.23□□□□□ -2.37
TUBD1-207ENST00000587476 TENM4Q6N022 2769 aa0.23□□□□□ -2.37
TUBD1-207ENST00000587476 REV3LO60673 3130 aa0.23□□□□□ -2.37
TUBD1-207ENST00000587476 PTPN13Q12923 2485 aa0.23□□□□□ -2.37
TUBD1-207ENST00000587476 H3BUA1 57 aa0.23□□□□□ -2.37
TUBD1-207ENST00000587476 PRLHP81277 87 aa0.23□□□□□ -2.37
TUBD1-207ENST00000587476 CHD6Q8TD26 2715 aa0.22□□□□□ -2.37
TUBD1-207ENST00000587476 UBR5O95071 2799 aaPredicted RBP0.22□□□□□ -2.37
TUBD1-207ENST00000587476 WFDC10BQ8IUB3 73 aa0.22□□□□□ -2.37
TUBD1-207ENST00000587476 SMIM2Q9BVW6 85 aa0.22□□□□□ -2.37
TUBD1-207ENST00000587476 KAAG1Q9UBP8 84 aa0.22□□□□□ -2.37
TUBD1-207ENST00000587476 SPTA1P02549 2419 aa0.22□□□□□ -2.37
TUBD1-207ENST00000587476 PDE4DIPQ5VU43 2346 aa0.21□□□□□ -2.38
TUBD1-207ENST00000587476 ATRQ13535 2644 aa0.21□□□□□ -2.38
TUBD1-207ENST00000587476 CROCC2H7BZ55 1655 aa0.21□□□□□ -2.38
TUBD1-207ENST00000587476 CHD8Q9HCK8 2581 aa0.21□□□□□ -2.38
TUBD1-207ENST00000587476 VWFP04275 2813 aa0.21□□□□□ -2.38
TUBD1-207ENST00000587476 EP300Q09472 2414 aaPredicted RBP0.21□□□□□ -2.38
TUBD1-207ENST00000587476 NSD1Q96L73 2696 aaPredicted RBP0.2□□□□□ -2.38
TUBD1-207ENST00000587476 HECTD1Q9ULT8 2610 aa0.2□□□□□ -2.38
TUBD1-207ENST00000587476 TNXBP22105 4242 aa0.2□□□□□ -2.38
TUBD1-207ENST00000587476 TRANK1O15050 2925 aa0.2□□□□□ -2.38
TUBD1-207ENST00000587476 ABCA5Q8WWZ7 1642 aa0.2□□□□□ -2.38
TUBD1-207ENST00000587476 DSPP15924 2871 aaKnown RBP0.19□□□□□ -2.38
TUBD1-207ENST00000587476 IGLV5-48A0A075B6I7 105 aa0.19□□□□□ -2.38
TUBD1-207ENST00000587476 NOP10Q9NPE3 64 aaKnown RBP0.19□□□□□ -2.38
TUBD1-207ENST00000587476 NRXN3Q9Y4C0 1643 aa0.19□□□□□ -2.38
TUBD1-207ENST00000587476 AKAP13Q12802 2813 aa0.19□□□□□ -2.38
TUBD1-207ENST00000587476 PCNX1Q96RV3 2341 aa0.18□□□□□ -2.38
TUBD1-207ENST00000587476 H3BNG1 76 aa0.18□□□□□ -2.38
TUBD1-207ENST00000587476 NDUFA1O15239 70 aa0.18□□□□□ -2.38
TUBD1-207ENST00000587476 SPRR2DP22532 72 aa0.18□□□□□ -2.38
TUBD1-207ENST00000587476 MAP1BP46821 2468 aaKnown RBP0.18□□□□□ -2.38
TUBD1-207ENST00000587476 LMO7Q8WWI1 1683 aa0.18□□□□□ -2.38
TUBD1-207ENST00000587476 CREBBPQ92793 2442 aa0.17□□□□□ -2.38
TUBD1-207ENST00000587476 ALMS1Q8TCU4 4167 aa0.17□□□□□ -2.38
TUBD1-207ENST00000587476 MMP24-AS1A0A0U1RRL7 71 aa0.17□□□□□ -2.38
TUBD1-207ENST00000587476 IQGAP2Q13576 1575 aa0.17□□□□□ -2.38
TUBD1-207ENST00000587476 CDC42BPAQ5VT25 1732 aa0.17□□□□□ -2.38
TUBD1-207ENST00000587476 BPTFQ12830 3046 aa0.17□□□□□ -2.38
TUBD1-207ENST00000587476 CELSR1Q9NYQ6 3014 aa0.17□□□□□ -2.38
TUBD1-207ENST00000587476 GPR98Q8WXG9 6306 aa0.17□□□□□ -2.38
TUBD1-207ENST00000587476 NFAT5O94916 1531 aa0.17□□□□□ -2.38
TUBD1-207ENST00000587476 CACNA1AO00555 2505 aa0.17□□□□□ -2.38
TUBD1-207ENST00000587476 PKD1L2Q7Z442 2459 aa0.16□□□□□ -2.38
TUBD1-207ENST00000587476 TOGARAM1Q9Y4F4 1720 aa0.16□□□□□ -2.38
TUBD1-207ENST00000587476 C9orf92A6NGG3 77 aa0.16□□□□□ -2.38
TUBD1-207ENST00000587476 M0QY20 66 aa0.16□□□□□ -2.38
TUBD1-207ENST00000587476 DEFB131AP59861 70 aa0.16□□□□□ -2.38
TUBD1-207ENST00000587476 KIF21BO75037 1637 aa0.16□□□□□ -2.38
TUBD1-207ENST00000587476 FAT2Q9NYQ8 4349 aa0.16□□□□□ -2.38
TUBD1-207ENST00000587476 TOP2AP11388 1531 aaKnown RBP0.15□□□□□ -2.39
TUBD1-207ENST00000587476 SPRR2BP35325 72 aa0.15□□□□□ -2.39
TUBD1-207ENST00000587476 BSNQ9UPA5 3926 aa0.15□□□□□ -2.39
TUBD1-207ENST00000587476 IQGAP1P46940 1657 aa0.14□□□□□ -2.39
TUBD1-207ENST00000587476 ANKRD36CQ5JPF3 1778 aa0.14□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms