RNA–Protein interactions for RNA: ENST00000586796.1

RETREG3-204, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-204ENST00000586796 SNCGO76070 127 aa12.33□□□□□ -0.44
RETREG3-204ENST00000586796 M0R143 59 aa12.32□□□□□ -0.44
RETREG3-204ENST00000586796 SPINK1P00995 79 aa12.31□□□□□ -0.44
RETREG3-204ENST00000586796 HRCT1Q6UXD1 115 aa12.3□□□□□ -0.44
RETREG3-204ENST00000586796 CLEC2BQ92478 149 aa12.29□□□□□ -0.44
RETREG3-204ENST00000586796 F8WEM9 126 aa12.27□□□□□ -0.45
RETREG3-204ENST00000586796 COX6CP09669 75 aa12.27□□□□□ -0.45
RETREG3-204ENST00000586796 A0A0G2JQZ4 141 aa12.26□□□□□ -0.45
RETREG3-204ENST00000586796 SNHG12Q9BXW3 62 aa12.25□□□□□ -0.45
RETREG3-204ENST00000586796 A0A1B0GX51 115 aa12.23□□□□□ -0.45
RETREG3-204ENST00000586796 SCGB1C2P0DMR2 95 aa12.23□□□□□ -0.45
RETREG3-204ENST00000586796 BATFQ16520 125 aa12.23□□□□□ -0.45
RETREG3-204ENST00000586796 PPDPFLQ8WWR9 84 aa12.23□□□□□ -0.45
RETREG3-204ENST00000586796 OCIAD2Q56VL3 154 aa12.22□□□□□ -0.45
RETREG3-204ENST00000586796 RPS29P62273 56 aaKnown RBP12.2□□□□□ -0.46
RETREG3-204ENST00000586796 DNAL4O96015 105 aa12.19□□□□□ -0.46
RETREG3-204ENST00000586796 FABP2P12104 132 aa12.18□□□□□ -0.46
RETREG3-204ENST00000586796 NAA38Q9BRA0 125 aaKnown RBP12.18□□□□□ -0.46
RETREG3-204ENST00000586796 IGLV7-46A0A075B6I9 117 aa12.16□□□□□ -0.46
RETREG3-204ENST00000586796 H3BUT2 72 aa12.15□□□□□ -0.46
RETREG3-204ENST00000586796 GHRHP01286 108 aa12.15□□□□□ -0.46
RETREG3-204ENST00000586796 CD164Q04900 197 aa12.15□□□□□ -0.46
RETREG3-204ENST00000586796 LIMD2Q9BT23 127 aa12.15□□□□□ -0.46
RETREG3-204ENST00000586796 NDUFV3P56181 108 aaKnown RBP12.14□□□□□ -0.47
RETREG3-204ENST00000586796 ORMDL1Q9P0S3 153 aa12.14□□□□□ -0.47
RETREG3-204ENST00000586796 LPAP08519 4548 aa12.14□□□□□ -0.47
RETREG3-204ENST00000586796 IGLV8-61A0A075B6I0 122 aa12.13□□□□□ -0.47
RETREG3-204ENST00000586796 Q6JHZ5 121 aa12.13□□□□□ -0.47
RETREG3-204ENST00000586796 IGFL1Q6UW32 110 aa12.13□□□□□ -0.47
RETREG3-204ENST00000586796 FP248Q71RG6 208 aaPredicted RBP12.11□□□□□ -0.47
RETREG3-204ENST00000586796 LRP2P98164 4655 aa12.11□□□□□ -0.47
RETREG3-204ENST00000586796 LST1O00453 97 aa12.1□□□□□ -0.47
RETREG3-204ENST00000586796 TRACP01848 142 aa12.08□□□□□ -0.48
RETREG3-204ENST00000586796 H3BMG7 143 aa12.07□□□□□ -0.48
RETREG3-204ENST00000586796 UBR4Q5T4S7 5183 aa12.07□□□□□ -0.48
RETREG3-204ENST00000586796 A0A1B0GV72 72 aa12.06□□□□□ -0.48
RETREG3-204ENST00000586796 H3BQ85 93 aa12.05□□□□□ -0.48
RETREG3-204ENST00000586796 TMEM256-PLSCR3K7ERE1 68 aa12.05□□□□□ -0.48
RETREG3-204ENST00000586796 TCL1BO95988 128 aa12.04□□□□□ -0.48
RETREG3-204ENST00000586796 ATXN8Q156A1 80 aa12.02□□□□□ -0.49
RETREG3-204ENST00000586796 TPRXLQ17RH7 258 aa12.02□□□□□ -0.49
RETREG3-204ENST00000586796 TRBV7-7A0A0K0K1E9 115 aa12.01□□□□□ -0.49
RETREG3-204ENST00000586796 CDIP1Q9H305 208 aa12.01□□□□□ -0.49
RETREG3-204ENST00000586796 Q5XG85 94 aa12□□□□□ -0.49
RETREG3-204ENST00000586796 TAX1BP3O14907 124 aa11.99□□□□□ -0.49
RETREG3-204ENST00000586796 LYRM7Q5U5X0 104 aa11.99□□□□□ -0.49
RETREG3-204ENST00000586796 BAALC-AS2P0C853 105 aa11.98□□□□□ -0.49
RETREG3-204ENST00000586796 C9orf118A6NHY6 69 aa11.97□□□□□ -0.49
RETREG3-204ENST00000586796 UBE2V1Q13404 147 aa11.97□□□□□ -0.49
RETREG3-204ENST00000586796 KRTAP13-3Q3SY46 172 aa11.96□□□□□ -0.49
RETREG3-204ENST00000586796 C1orf195Q5TG92 126 aa11.96□□□□□ -0.49
RETREG3-204ENST00000586796 PCP4L1A6NKN8 68 aa11.95□□□□□ -0.5
RETREG3-204ENST00000586796 ANKRD29Q8N6D5 301 aa11.95□□□□□ -0.5
RETREG3-204ENST00000586796 TEN1Q86WV5 123 aa11.94□□□□□ -0.5
RETREG3-204ENST00000586796 TRBV20-1A0A075B6N2 111 aa11.92□□□□□ -0.5
RETREG3-204ENST00000586796 A0A1W2PPM0 123 aa11.91□□□□□ -0.5
RETREG3-204ENST00000586796 Q6Q795 121 aa11.91□□□□□ -0.5
RETREG3-204ENST00000586796 A0A1W2PNM2 257 aa11.9□□□□□ -0.5
RETREG3-204ENST00000586796 A0A087WSZ3 146 aa11.88□□□□□ -0.51
RETREG3-204ENST00000586796 C9JAW5 83 aa11.87□□□□□ -0.51
RETREG3-204ENST00000586796 RBM3P98179 157 aaKnown RBP11.87□□□□□ -0.51
RETREG3-204ENST00000586796 ASB16-AS1Q495Z4 193 aa11.87□□□□□ -0.51
RETREG3-204ENST00000586796 COL5A1-AS1Q5SY13 56 aa11.87□□□□□ -0.51
RETREG3-204ENST00000586796 C9orf92A6NGG3 77 aa11.86□□□□□ -0.51
RETREG3-204ENST00000586796 DSCR8Q96T75 97 aa11.85□□□□□ -0.51
RETREG3-204ENST00000586796 SS18L2Q9UHA2 77 aa11.85□□□□□ -0.51
RETREG3-204ENST00000586796 CCKP06307 115 aa11.84□□□□□ -0.51
RETREG3-204ENST00000586796 VPS25Q9BRG1 176 aa11.83□□□□□ -0.52
RETREG3-204ENST00000586796 RNF213Q63HN8 5207 aa11.82□□□□□ -0.52
RETREG3-204ENST00000586796 TRBV7-4A0A0J9YYF1 115 aa11.81□□□□□ -0.52
RETREG3-204ENST00000586796 MTURNQ8N3F0 131 aa11.8□□□□□ -0.52
RETREG3-204ENST00000586796 SPCS1Q9Y6A9 102 aa11.79□□□□□ -0.52
RETREG3-204ENST00000586796 XP32Q5T750 250 aa11.78□□□□□ -0.52
RETREG3-204ENST00000586796 JMJD7-PLA2G4BH0Y9G9 81 aa11.77□□□□□ -0.53
RETREG3-204ENST00000586796 H3BT86 120 aa11.72□□□□□ -0.53
RETREG3-204ENST00000586796 Q96NJ1 140 aa11.72□□□□□ -0.53
RETREG3-204ENST00000586796 C14orf132Q9NPU4 83 aa11.72□□□□□ -0.53
RETREG3-204ENST00000586796 Q6ZQT0 140 aa11.69□□□□□ -0.54
RETREG3-204ENST00000586796 MUC17Q685J3 4493 aa11.69□□□□□ -0.54
RETREG3-204ENST00000586796 LOC110117498A0A087WWA1 95 aa11.68□□□□□ -0.54
RETREG3-204ENST00000586796 SEC61BP60468 96 aaKnown RBP11.67□□□□□ -0.54
RETREG3-204ENST00000586796 DEFB116Q30KQ4 102 aa11.67□□□□□ -0.54
RETREG3-204ENST00000586796 OBSCN-AS1Q96MR7 158 aa11.67□□□□□ -0.54
RETREG3-204ENST00000586796 SIGMAR1Q99720 223 aa11.67□□□□□ -0.54
RETREG3-204ENST00000586796 K7EP34 96 aa11.65□□□□□ -0.54
RETREG3-204ENST00000586796 IGKV4-1P06312 121 aa11.65□□□□□ -0.54
RETREG3-204ENST00000586796 PDE6GP18545 87 aa11.65□□□□□ -0.54
RETREG3-204ENST00000586796 LINC00472Q9H8W2 130 aa11.62□□□□□ -0.55
RETREG3-204ENST00000586796 SMCPP49901 116 aaPredicted RBP11.6□□□□□ -0.55
RETREG3-204ENST00000586796 C21orf62-AS1Q17RA5 79 aa11.59□□□□□ -0.55
RETREG3-204ENST00000586796 PCOTHQ58A44 107 aa11.57□□□□□ -0.56
RETREG3-204ENST00000586796 GTF2H5Q6ZYL4 71 aa11.57□□□□□ -0.56
RETREG3-204ENST00000586796 MUC2Q02817 5179 aa11.57□□□□□ -0.56
RETREG3-204ENST00000586796 PRO0461Q9UI25 63 aa11.56□□□□□ -0.56
RETREG3-204ENST00000586796 DSCR10P59022 87 aa11.55□□□□□ -0.56
RETREG3-204ENST00000586796 RPL37P61927 97 aaKnown RBP11.55□□□□□ -0.56
RETREG3-204ENST00000586796 A0A1B0GW54 56 aa11.54□□□□□ -0.56
RETREG3-204ENST00000586796 KRTAP4-1Q9BYQ7 146 aa11.51□□□□□ -0.57
RETREG3-204ENST00000586796 IGHV6-1A0A0B4J1U7 121 aa11.5□□□□□ -0.57
RETREG3-204ENST00000586796 LINC00313P59037 77 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 167.4 ms