RNA–Protein interactions for RNA: ENST00000585058.1

RAB11FIP4-210, Transcript of RAB11 family interacting protein 4, humanhuman

TSL 2

Gene RAB11FIP4, Length 5,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4-210ENST00000585058 ATRQ13535 2644 aa8.18□□□□□ -1.1
RAB11FIP4-210ENST00000585058 S4R3F8 94 aa8.18□□□□□ -1.1
RAB11FIP4-210ENST00000585058 CSAG1Q6PB30 78 aa8.16□□□□□ -1.1
RAB11FIP4-210ENST00000585058 DMAC1Q96GE9 116 aa8.16□□□□□ -1.1
RAB11FIP4-210ENST00000585058 DNAH14Q0VDD8 3507 aa8.16□□□□□ -1.1
RAB11FIP4-210ENST00000585058 A0A0C4DFX4 3053 aa8.15□□□□□ -1.1
RAB11FIP4-210ENST00000585058 WIPF1O43516 503 aa8.15□□□□□ -1.11
RAB11FIP4-210ENST00000585058 Q8NDZ9 215 aa8.14□□□□□ -1.11
RAB11FIP4-210ENST00000585058 Q5XG85 94 aa8.13□□□□□ -1.11
RAB11FIP4-210ENST00000585058 Q5W150 140 aa8.12□□□□□ -1.11
RAB11FIP4-210ENST00000585058 CYSTM1Q9H1C7 97 aa8.12□□□□□ -1.11
RAB11FIP4-210ENST00000585058 SPTBN5Q9NRC6 3674 aaKnown RBP8.12□□□□□ -1.11
RAB11FIP4-210ENST00000585058 PLAC8Q9NZF1 115 aa8.12□□□□□ -1.11
RAB11FIP4-210ENST00000585058 FP248Q71RG6 208 aaPredicted RBP8.11□□□□□ -1.11
RAB11FIP4-210ENST00000585058 MAST4O15021 2626 aa8.1□□□□□ -1.11
RAB11FIP4-210ENST00000585058 SPINK7P58062 85 aa8.09□□□□□ -1.11
RAB11FIP4-210ENST00000585058 Q5VV11 94 aa8.09□□□□□ -1.11
RAB11FIP4-210ENST00000585058 SPRR1AP35321 89 aa8.09□□□□□ -1.12
RAB11FIP4-210ENST00000585058 FLNAP21333 2647 aaKnown RBP8.08□□□□□ -1.12
RAB11FIP4-210ENST00000585058 R4GN34 69 aa8.07□□□□□ -1.12
RAB11FIP4-210ENST00000585058 HELZ2Q9BYK8 2649 aaKnown RBP8.06□□□□□ -1.12
RAB11FIP4-210ENST00000585058 LINC00472Q9H8W2 130 aa8.06□□□□□ -1.12
RAB11FIP4-210ENST00000585058 H3BS24 57 aa8.05□□□□□ -1.12
RAB11FIP4-210ENST00000585058 ITPR3Q14573 2671 aa8.04□□□□□ -1.12
RAB11FIP4-210ENST00000585058 A0A0A0MQY5 61 aa8.03□□□□□ -1.12
RAB11FIP4-210ENST00000585058 SPRR1BP22528 89 aa8□□□□□ -1.13
RAB11FIP4-210ENST00000585058 TRIOO75962 3097 aa8□□□□□ -1.13
RAB11FIP4-210ENST00000585058 FLG2Q5D862 2391 aaPredicted RBP7.99□□□□□ -1.13
RAB11FIP4-210ENST00000585058 CFAP46Q8IYW2 2715 aa7.98□□□□□ -1.13
RAB11FIP4-210ENST00000585058 RPL37P61927 97 aaKnown RBP7.96□□□□□ -1.14
RAB11FIP4-210ENST00000585058 VCANP13611 3396 aa7.96□□□□□ -1.14
RAB11FIP4-210ENST00000585058 LAMA1P25391 3075 aa7.95□□□□□ -1.14
RAB11FIP4-210ENST00000585058 CENPEQ02224 2701 aa7.95□□□□□ -1.14
RAB11FIP4-210ENST00000585058 KRTAP1-5Q9BYS1 174 aa7.95□□□□□ -1.14
RAB11FIP4-210ENST00000585058 KRTAP26-1Q6PEX3 210 aa7.95□□□□□ -1.14
RAB11FIP4-210ENST00000585058 MGAQ8IWI9 3026 aa7.95□□□□□ -1.14
RAB11FIP4-210ENST00000585058 ROMO1P60602 79 aa7.94□□□□□ -1.14
RAB11FIP4-210ENST00000585058 SEC61BP60468 96 aaKnown RBP7.94□□□□□ -1.14
RAB11FIP4-210ENST00000585058 AKAP13Q12802 2813 aa7.94□□□□□ -1.14
RAB11FIP4-210ENST00000585058 CFAP54Q96N23 3096 aa7.93□□□□□ -1.14
RAB11FIP4-210ENST00000585058 ZNF292O60281 2723 aa7.93□□□□□ -1.14
RAB11FIP4-210ENST00000585058 M0QZ58 72 aa7.92□□□□□ -1.14
RAB11FIP4-210ENST00000585058 STAB1Q9NY15 2570 aa7.92□□□□□ -1.14
RAB11FIP4-210ENST00000585058 TNRC18O15417 2968 aaPredicted RBP7.91□□□□□ -1.14
RAB11FIP4-210ENST00000585058 Q5VSD8 79 aa7.91□□□□□ -1.14
RAB11FIP4-210ENST00000585058 WDFY4Q6ZS81 3184 aa7.91□□□□□ -1.14
RAB11FIP4-210ENST00000585058 H1FX-AS1Q4G0G2 97 aa7.9□□□□□ -1.14
RAB11FIP4-210ENST00000585058 CELSR3Q9NYQ7 3312 aa7.89□□□□□ -1.15
RAB11FIP4-210ENST00000585058 EYSQ5T1H1 3165 aa7.88□□□□□ -1.15
RAB11FIP4-210ENST00000585058 OXTP01178 125 aa7.88□□□□□ -1.15
RAB11FIP4-210ENST00000585058 KRTAP10-1P60331 282 aa7.87□□□□□ -1.15
RAB11FIP4-210ENST00000585058 KRTAP10-2P60368 255 aa7.85□□□□□ -1.15
RAB11FIP4-210ENST00000585058 SPATA8Q6RVD6 105 aa7.85□□□□□ -1.15
RAB11FIP4-210ENST00000585058 REV3LO60673 3130 aa7.85□□□□□ -1.15
RAB11FIP4-210ENST00000585058 COL6A3P12111 3177 aa7.84□□□□□ -1.15
RAB11FIP4-210ENST00000585058 VPS13AQ96RL7 3174 aa7.82□□□□□ -1.16
RAB11FIP4-210ENST00000585058 ADM2Q7Z4H4 148 aa7.82□□□□□ -1.16
RAB11FIP4-210ENST00000585058 NBEAL1Q6ZS30 2694 aa7.81□□□□□ -1.16
RAB11FIP4-210ENST00000585058 Q6ZR54 194 aa7.81□□□□□ -1.16
RAB11FIP4-210ENST00000585058 USP34Q70CQ2 3546 aa7.79□□□□□ -1.16
RAB11FIP4-210ENST00000585058 PLAC4Q8WY50 150 aa7.77□□□□□ -1.16
RAB11FIP4-210ENST00000585058 CHD6Q8TD26 2715 aa7.77□□□□□ -1.17
RAB11FIP4-210ENST00000585058 PANO1I0J062 215 aa7.77□□□□□ -1.17
RAB11FIP4-210ENST00000585058 LCE6AA0A183 80 aa7.74□□□□□ -1.17
RAB11FIP4-210ENST00000585058 KRTAP29-1A8MX34 341 aaPredicted RBP7.74□□□□□ -1.17
RAB11FIP4-210ENST00000585058 DMBT1Q9UGM3 2413 aaPredicted RBP7.73□□□□□ -1.17
RAB11FIP4-210ENST00000585058 KRTAP4-16G5E9R7 235 aaPredicted RBP7.73□□□□□ -1.17
RAB11FIP4-210ENST00000585058 TEP1Q99973 2627 aaKnown RBP7.73□□□□□ -1.17
RAB11FIP4-210ENST00000585058 SPEGQ15772 3267 aa7.72□□□□□ -1.17
RAB11FIP4-210ENST00000585058 A0A087X002 238 aa7.72□□□□□ -1.17
RAB11FIP4-210ENST00000585058 MYO15AQ9UKN7 3530 aa7.7□□□□□ -1.18
RAB11FIP4-210ENST00000585058 TEX15Q9BXT5 2789 aa7.7□□□□□ -1.18
RAB11FIP4-210ENST00000585058 NOTCH2NLQ7Z3S9 236 aa7.69□□□□□ -1.18
RAB11FIP4-210ENST00000585058 DSPP15924 2871 aaKnown RBP7.68□□□□□ -1.18
RAB11FIP4-210ENST00000585058 FREM2Q5SZK8 3169 aa7.67□□□□□ -1.18
RAB11FIP4-210ENST00000585058 ASB16-AS1Q495Z4 193 aa7.66□□□□□ -1.18
RAB11FIP4-210ENST00000585058 IGSF10Q6WRI0 2623 aa7.65□□□□□ -1.18
RAB11FIP4-210ENST00000585058 SETXQ7Z333 2677 aaKnown RBP7.64□□□□□ -1.19
RAB11FIP4-210ENST00000585058 UNC79Q9P2D8 2635 aa7.64□□□□□ -1.19
RAB11FIP4-210ENST00000585058 NOTCH1P46531 2555 aa7.63□□□□□ -1.19
RAB11FIP4-210ENST00000585058 STAB2Q8WWQ8 2551 aa7.62□□□□□ -1.19
RAB11FIP4-210ENST00000585058 A8MU10 97 aa7.61□□□□□ -1.19
RAB11FIP4-210ENST00000585058 GCN1Q92616 2671 aaKnown RBP7.61□□□□□ -1.19
RAB11FIP4-210ENST00000585058 COL6A5A8TX70 2615 aa7.61□□□□□ -1.19
RAB11FIP4-210ENST00000585058 FRYLO94915 3013 aa7.58□□□□□ -1.2
RAB11FIP4-210ENST00000585058 BOD1L1Q8NFC6 3051 aa7.58□□□□□ -1.2
RAB11FIP4-210ENST00000585058 FRYQ5TBA9 3013 aa7.58□□□□□ -1.2
RAB11FIP4-210ENST00000585058 KRTAP16-1A8MUX0 517 aa7.57□□□□□ -1.2
RAB11FIP4-210ENST00000585058 KRTAP25-1Q3LHN0 102 aa7.57□□□□□ -1.2
RAB11FIP4-210ENST00000585058 KRTAP11-1Q8IUC1 163 aa7.57□□□□□ -1.2
RAB11FIP4-210ENST00000585058 A8MUU9 505 aa7.55□□□□□ -1.2
RAB11FIP4-210ENST00000585058 C20orf166-AS1Q96NR2 134 aa7.55□□□□□ -1.2
RAB11FIP4-210ENST00000585058 A6NN06 94 aa7.53□□□□□ -1.2
RAB11FIP4-210ENST00000585058 MAP1AP78559 2803 aaPredicted RBP7.52□□□□□ -1.21
RAB11FIP4-210ENST00000585058 BAHCC1Q9P281 2608 aa7.52□□□□□ -1.21
RAB11FIP4-210ENST00000585058 DMXL2Q8TDJ6 3036 aa7.51□□□□□ -1.21
RAB11FIP4-210ENST00000585058 DMXL1Q9Y485 3027 aa7.49□□□□□ -1.21
RAB11FIP4-210ENST00000585058 LRBAP50851 2863 aa7.49□□□□□ -1.21
RAB11FIP4-210ENST00000585058 NBEAL2Q6ZNJ1 2754 aa7.48□□□□□ -1.21
RAB11FIP4-210ENST00000585058 RPS29P62273 56 aaKnown RBP7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms