RNA–Protein interactions for RNA: ENST00000581711.1

SMCHD1-207, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 4

Gene SMCHD1, Length 546 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-207ENST00000581711 TMEM218A2RU14 115 aa-0.39□□□□□ -2.47
SMCHD1-207ENST00000581711 HMGN3Q15651 99 aa-0.39□□□□□ -2.47
SMCHD1-207ENST00000581711 SERP2Q8N6R1 65 aa-0.39□□□□□ -2.47
SMCHD1-207ENST00000581711 DMDP11532 3685 aa-0.39□□□□□ -2.47
SMCHD1-207ENST00000581711 CICQ96RK0 1608 aaPredicted RBP-0.39□□□□□ -2.47
SMCHD1-207ENST00000581711 CLTCQ00610 1675 aaKnown RBP-0.4□□□□□ -2.47
SMCHD1-207ENST00000581711 NRXN1Q9ULB1 1477 aa-0.4□□□□□ -2.47
SMCHD1-207ENST00000581711 ANKRD36BQ8N2N9 1353 aa-0.4□□□□□ -2.47
SMCHD1-207ENST00000581711 H0YGG7 62 aa-0.4□□□□□ -2.47
SMCHD1-207ENST00000581711 MT-ATP8P03928 68 aa-0.4□□□□□ -2.47
SMCHD1-207ENST00000581711 S100PP25815 95 aa-0.4□□□□□ -2.47
SMCHD1-207ENST00000581711 S100A10P60903 97 aa-0.4□□□□□ -2.47
SMCHD1-207ENST00000581711 COL5A1-AS1Q5SY13 56 aa-0.4□□□□□ -2.47
SMCHD1-207ENST00000581711 ALKAL2Q6UX46 152 aa-0.4□□□□□ -2.47
SMCHD1-207ENST00000581711 ZNF720Q7Z2F6 126 aa-0.4□□□□□ -2.47
SMCHD1-207ENST00000581711 WFDC13Q8IUB5 93 aa-0.4□□□□□ -2.47
SMCHD1-207ENST00000581711 PSENENQ9NZ42 101 aa-0.4□□□□□ -2.47
SMCHD1-207ENST00000581711 HIGD1BQ9P298 99 aa-0.4□□□□□ -2.47
SMCHD1-207ENST00000581711 FYCO1Q9BQS8 1478 aa-0.41□□□□□ -2.47
SMCHD1-207ENST00000581711 QSER1Q2KHR3 1735 aa-0.41□□□□□ -2.47
SMCHD1-207ENST00000581711 PTPN23Q9H3S7 1636 aa-0.41□□□□□ -2.47
SMCHD1-207ENST00000581711 UQCRHLA0A096LP55 91 aa-0.41□□□□□ -2.48
SMCHD1-207ENST00000581711 D6R8Y8 96 aa-0.41□□□□□ -2.48
SMCHD1-207ENST00000581711 LEPROTL1O95214 131 aa-0.41□□□□□ -2.48
SMCHD1-207ENST00000581711 LINC00032P0C843 101 aa-0.41□□□□□ -2.48
SMCHD1-207ENST00000581711 IGLC2P0DOY2 106 aa-0.41□□□□□ -2.48
SMCHD1-207ENST00000581711 IGLC3P0DOY3 106 aa-0.41□□□□□ -2.48
SMCHD1-207ENST00000581711 ETDBQ3ZM63 59 aa-0.41□□□□□ -2.48
SMCHD1-207ENST00000581711 MUSTN1Q8IVN3 82 aa-0.41□□□□□ -2.48
SMCHD1-207ENST00000581711 TCEAL7Q9BRU2 100 aa-0.41□□□□□ -2.48
SMCHD1-207ENST00000581711 ADAMTS12P58397 1594 aa-0.41□□□□□ -2.48
SMCHD1-207ENST00000581711 F8WEM9 126 aa-0.42□□□□□ -2.48
SMCHD1-207ENST00000581711 FAUP35544 74 aaKnown RBP-0.42□□□□□ -2.48
SMCHD1-207ENST00000581711 NMSQ5H8A3 153 aa-0.42□□□□□ -2.48
SMCHD1-207ENST00000581711 C14orf144Q96I85 54 aa-0.42□□□□□ -2.48
SMCHD1-207ENST00000581711 TEX14Q8IWB6 1497 aa-0.42□□□□□ -2.48
SMCHD1-207ENST00000581711 LCE6AA0A183 80 aa-0.43□□□□□ -2.48
SMCHD1-207ENST00000581711 ATP6V1G2-DDX39BF2Z307 99 aa-0.43□□□□□ -2.48
SMCHD1-207ENST00000581711 DPY30Q9C005 99 aa-0.43□□□□□ -2.48
SMCHD1-207ENST00000581711 DNAH10Q8IVF4 4471 aa-0.43□□□□□ -2.48
SMCHD1-207ENST00000581711 RGPD8O14715 1765 aaPredicted RBP-0.43□□□□□ -2.48
SMCHD1-207ENST00000581711 RGPD5Q99666 1765 aa-0.43□□□□□ -2.48
SMCHD1-207ENST00000581711 PREX1Q8TCU6 1659 aa-0.43□□□□□ -2.48
SMCHD1-207ENST00000581711 CNTLNQ9NXG0 1405 aa-0.44□□□□□ -2.48
SMCHD1-207ENST00000581711 DNAH17Q9UFH2 4485 aa-0.44□□□□□ -2.48
SMCHD1-207ENST00000581711 RBP2P50120 134 aa-0.44□□□□□ -2.48
SMCHD1-207ENST00000581711 ACBD7Q8N6N7 88 aa-0.44□□□□□ -2.48
SMCHD1-207ENST00000581711 EPRSP07814 1512 aaKnown RBP-0.44□□□□□ -2.48
SMCHD1-207ENST00000581711 ALKQ9UM73 1620 aa-0.45□□□□□ -2.48
SMCHD1-207ENST00000581711 MAGI2Q86UL8 1455 aa-0.45□□□□□ -2.48
SMCHD1-207ENST00000581711 COX7BP24311 80 aa-0.45□□□□□ -2.48
SMCHD1-207ENST00000581711 RPL38P63173 70 aaKnown RBP-0.45□□□□□ -2.48
SMCHD1-207ENST00000581711 COX6B2Q6YFQ2 88 aa-0.45□□□□□ -2.48
SMCHD1-207ENST00000581711 UBE2D4Q9Y2X8 147 aa-0.45□□□□□ -2.48
SMCHD1-207ENST00000581711 C4AP0C0L4 1744 aa-0.45□□□□□ -2.48
SMCHD1-207ENST00000581711 C4BP0C0L5 1744 aa-0.45□□□□□ -2.48
SMCHD1-207ENST00000581711 TIAM2Q8IVF5 1701 aa-0.45□□□□□ -2.48
SMCHD1-207ENST00000581711 PEG3Q9GZU2 1588 aa-0.45□□□□□ -2.48
SMCHD1-207ENST00000581711 FANCAO15360 1455 aa-0.46□□□□□ -2.48
SMCHD1-207ENST00000581711 LRRC9Q6ZRR7 1453 aa-0.46□□□□□ -2.48
SMCHD1-207ENST00000581711 SUPT6HQ7KZ85 1726 aaKnown RBP-0.46□□□□□ -2.48
SMCHD1-207ENST00000581711 AKAP12Q02952 1782 aa-0.46□□□□□ -2.48
SMCHD1-207ENST00000581711 SMIM11AP58511 58 aa-0.46□□□□□ -2.48
SMCHD1-207ENST00000581711 NCMAPQ5T1S8 102 aa-0.46□□□□□ -2.48
SMCHD1-207ENST00000581711 TROQ12816 1431 aaPredicted RBP-0.47□□□□□ -2.48
SMCHD1-207ENST00000581711 RGPD1P0DJD0 1748 aa-0.47□□□□□ -2.48
SMCHD1-207ENST00000581711 ANKRD26Q9UPS8 1709 aa-0.47□□□□□ -2.48
SMCHD1-207ENST00000581711 ATP10BO94823 1461 aa-0.47□□□□□ -2.48
SMCHD1-207ENST00000581711 RGPD4Q7Z3J3 1758 aa-0.47□□□□□ -2.48
SMCHD1-207ENST00000581711 LRRC7Q96NW7 1537 aa-0.47□□□□□ -2.48
SMCHD1-207ENST00000581711 A0A1B0GUT8 65 aa-0.47□□□□□ -2.48
SMCHD1-207ENST00000581711 NDUFA3O95167 84 aa-0.47□□□□□ -2.48
SMCHD1-207ENST00000581711 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.47□□□□□ -2.48
SMCHD1-207ENST00000581711 DNAH8Q96JB1 4490 aa-0.47□□□□□ -2.49
SMCHD1-207ENST00000581711 UBR1Q8IWV7 1749 aa-0.47□□□□□ -2.49
SMCHD1-207ENST00000581711 DNAH11Q96DT5 4516 aa-0.47□□□□□ -2.49
SMCHD1-207ENST00000581711 RGPD3A6NKT7 1758 aaPredicted RBP-0.47□□□□□ -2.49
SMCHD1-207ENST00000581711 IQCF6A8MYZ5 107 aa-0.48□□□□□ -2.49
SMCHD1-207ENST00000581711 H3BNG1 76 aa-0.48□□□□□ -2.49
SMCHD1-207ENST00000581711 M0R143 59 aa-0.48□□□□□ -2.49
SMCHD1-207ENST00000581711 MT1AP04731 61 aa-0.48□□□□□ -2.49
SMCHD1-207ENST00000581711 HMGN2P05204 90 aaKnown RBP-0.48□□□□□ -2.49
SMCHD1-207ENST00000581711 PEA15Q15121 130 aa-0.48□□□□□ -2.49
SMCHD1-207ENST00000581711 PLGLAQ15195 96 aa-0.48□□□□□ -2.49
SMCHD1-207ENST00000581711 GAFA1Q96PS6 74 aa-0.48□□□□□ -2.49
SMCHD1-207ENST00000581711 LTN1O94822 1766 aa-0.48□□□□□ -2.49
SMCHD1-207ENST00000581711 MYO3AQ8NEV4 1616 aa-0.49□□□□□ -2.49
SMCHD1-207ENST00000581711 CYB5AP00167 134 aa-0.49□□□□□ -2.49
SMCHD1-207ENST00000581711 GYPAP02724 150 aa-0.49□□□□□ -2.49
SMCHD1-207ENST00000581711 ATP7BP35670 1465 aa-0.49□□□□□ -2.49
SMCHD1-207ENST00000581711 DNAH2Q9P225 4427 aa-0.49□□□□□ -2.49
SMCHD1-207ENST00000581711 BAZ1AQ9NRL2 1556 aaPredicted RBP-0.49□□□□□ -2.49
SMCHD1-207ENST00000581711 POLR1AO95602 1720 aaPredicted RBP-0.5□□□□□ -2.49
SMCHD1-207ENST00000581711 C9orf92A6NGG3 77 aa-0.5□□□□□ -2.49
SMCHD1-207ENST00000581711 ABCC10Q5T3U5 1492 aa-0.5□□□□□ -2.49
SMCHD1-207ENST00000581711 NESP48681 1621 aa-0.51□□□□□ -2.49
SMCHD1-207ENST00000581711 NEXMIFQ5QGS0 1516 aa-0.51□□□□□ -2.49
SMCHD1-207ENST00000581711 VPS13DQ5THJ4 4388 aa-0.51□□□□□ -2.49
SMCHD1-207ENST00000581711 KRTAP8-1Q8IUC2 63 aa-0.51□□□□□ -2.49
SMCHD1-207ENST00000581711 WFDC9Q8NEX5 89 aa-0.51□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms